Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13576 Sapria himalayana HOM05D001670 ORTHO05D002980 1.4e-122 443.0 219 100.0
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 1.1e-76 290.4 210 70.0
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.9e-76 289.7 210 71.0
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 2.5e-76 289.3 210 69.5
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 7.4e-76 287.7 210 70.5
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 7.4e-76 287.7 210 70.5
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.4e-74 283.5 210 70.0
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.4e-74 283.5 210 70.0
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 1.8e-74 283.1 210 68.6
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.8e-74 283.1 210 68.1
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 2.4e-74 282.7 210 69.5
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 3.1e-74 282.3 210 67.6
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.0e-74 282.0 210 69.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 4.0e-74 282.0 210 69.5
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 5.3e-74 281.6 210 67.1
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 9.0e-74 280.8 212 68.4
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 9.0e-74 280.8 210 68.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 1.2e-73 280.4 210 67.1
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.5e-73 280.0 210 67.1
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 1.5e-73 280.0 210 67.1
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.0e-73 279.6 210 67.1
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 2.6e-73 279.3 210 66.2
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 2.6e-73 279.3 210 66.2
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 2.6e-73 279.3 210 67.6
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 4.5e-73 278.5 210 66.7
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 4.5e-73 278.5 210 66.2
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 4.5e-73 278.5 210 67.6
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 4.5e-73 278.5 210 66.7
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 5.8e-73 278.1 210 65.7
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 5.8e-73 278.1 215 65.1
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 5.8e-73 278.1 210 66.2
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 7.6e-73 277.7 210 67.1
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.7e-72 276.6 210 66.7
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 2.2e-72 276.2 210 66.7
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 2.2e-72 276.2 210 65.7
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 2.2e-72 276.2 210 67.1
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 2.2e-72 276.2 210 66.7
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 3.8e-72 275.4 210 66.2
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 3.8e-72 275.4 210 65.7
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 3.8e-72 275.4 210 66.7
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 4.9e-72 275.0 210 66.2
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.9e-72 275.0 210 66.7
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 6.4e-72 274.6 210 65.2
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 8.4e-72 274.2 210 66.2
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 8.4e-72 274.2 210 65.7
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 1.4e-71 273.5 210 65.2
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.9e-71 273.1 210 65.2
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 2.4e-71 272.7 210 65.2
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 2.4e-71 272.7 210 64.8
Psat4g209440 Pisum sativum HOM05D001670 ORTHO05D002980 2.4e-71 272.7 210 64.8
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 2.4e-71 272.7 210 65.7
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 3.2e-71 272.3 210 66.7
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 3.2e-71 272.3 210 65.7
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 3.2e-71 272.3 210 65.2
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.2e-71 271.9 210 65.2
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 65.2
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 64.8
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 64.8
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 7.1e-71 271.2 210 64.8
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 9.3e-71 270.8 210 64.8
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.6e-70 270.0 210 65.2
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.6e-70 270.0 210 65.2
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.6e-70 270.0 210 64.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 2.1e-70 269.6 210 64.3
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 2.7e-70 269.2 210 66.2
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 3.5e-70 268.9 210 65.7
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 3.5e-70 268.9 210 65.7
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 3.5e-70 268.9 210 64.8
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 3.5e-70 268.9 210 64.8
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.6e-70 268.5 210 63.8
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 6.0e-70 268.1 210 65.2
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 6.0e-70 268.1 210 64.8
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 6.0e-70 268.1 210 64.3
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 7.9e-70 267.7 210 64.8
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.3e-69 266.9 210 64.3
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.8e-69 266.5 215 62.8
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.9e-69 265.4 210 63.8
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 5.1e-69 265.0 210 65.2
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 6.7e-69 264.6 210 65.2
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 8.7e-69 264.2 211 63.5
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.1e-68 263.8 210 65.7
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 1.1e-68 263.8 210 64.3
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 2.5e-68 262.7 210 64.8
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.5e-68 262.7 210 65.2
A09p69250 Brassica napus HOM05D001670 ORTHO05D002980 3.3e-68 262.3 210 64.3
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 3.3e-68 262.3 210 64.3
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 3.3e-68 262.3 210 64.3
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.3e-68 262.3 210 63.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 4.3e-68 261.9 210 64.8
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.3e-68 261.9 223 61.4
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 4.3e-68 261.9 210 63.8
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 5.6e-68 261.5 210 64.8
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 5.6e-68 261.5 210 64.8
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 5.6e-68 261.5 210 64.8
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 7.4e-68 261.2 210 64.3
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 7.4e-68 261.2 210 63.3
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 7.4e-68 261.2 210 63.3
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 7.4e-68 261.2 210 63.3
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 7.4e-68 261.2 210 63.8
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 9.6e-68 260.8 210 65.2
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-67 260.4 210 63.8
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.6e-67 260.0 210 63.3
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.6e-67 260.0 210 63.3
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.6e-67 260.0 210 63.3
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 6.2e-67 258.1 210 62.4
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 8.1e-67 257.7 210 63.8
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 3.1e-66 255.8 242 57.0
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 4.0e-66 255.4 210 62.4
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 5.3e-66 255.0 210 62.4
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 6.9e-66 254.6 210 61.0
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 6.9e-66 254.6 215 60.5
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 2.0e-65 253.1 210 61.4
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.4e-65 252.3 219 59.8
CSS0024648 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 4.5e-65 251.9 210 61.4
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.7e-64 250.0 210 62.4
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 2.2e-64 249.6 210 61.9
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 2.2e-64 249.6 213 62.4
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 2.2e-64 249.6 213 62.4
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 4.9e-64 248.4 210 59.5
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 4.2e-63 245.4 210 58.1
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 1.2e-62 243.8 210 61.9
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.6e-62 243.4 210 58.1
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 2.7e-62 242.7 210 58.1
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 6.0e-62 241.5 220 57.3
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 6.0e-62 241.5 210 58.6
Actinidia20640 Actinidia chinensis HOM05D001670 ORTHO05D002980 5.1e-61 238.4 199 63.3
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 5.1e-61 238.4 210 59.0
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 8.7e-61 237.7 219 59.8
vmacro06812 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 8.7e-61 237.7 214 56.5
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 3.3e-60 235.7 219 59.4
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 5.7e-60 235.0 210 55.2
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.8e-58 229.9 210 54.8
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 1.5e-57 226.9 210 55.2
Os03g0102366 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.5e-57 226.9 214 51.4
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 7.6e-57 224.6 210 56.2
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.2e-56 223.0 211 52.6
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 3.8e-56 222.2 210 56.7
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.4e-55 220.3 210 51.4
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 4.2e-55 218.8 179 62.0
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 5.5e-55 218.4 191 60.7
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-54 216.5 210 53.3
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 1.8e-53 213.4 180 60.6
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 2.3e-53 213.0 178 61.2
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 3.9e-53 212.2 176 61.4
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 9.7e-52 207.6 212 50.5
CSS0042972 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.2e-51 206.5 151 66.9
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 2.6e-49 199.5 209 49.3
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 7.9e-46 188.0 103 83.5
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.0e-44 183.3 178 54.5
MD07G1112800 Malus domestica HOM05D001670 ORTHO05D002980 9.7e-44 181.0 162 59.9
Actinidia00132 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.1e-42 177.6 184 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 3.1e-42 176.0 210 44.3
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 3.4e-41 172.6 209 42.6
vmacro08837 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.9e-40 169.5 170 52.9
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 1.1e-39 167.5 219 41.6
Lsat_1_v5_gn_9_55460 Lactuca sativa HOM05D001670 ORTHO05D016190 8.8e-37 157.9 145 57.9
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 4.8e-35 152.1 144 56.2
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 8.2e-35 151.4 144 56.2
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 1.7e-32 143.7 144 53.5
Lj4P515T29 Lonicera japonica HOM05D001670 ORTHO05D010670 2.5e-31 139.8 79 81.0
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 3.6e-30 136.0 147 44.9
HanXRQChr16g0519711 Helianthus annuus HOM05D001670 ORTHO05D002980 2.7e-22 109.8 95 48.4
MBI16_g16201_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 6.1e-22 108.6 54 87.0
MBI15_g34611_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 1.3e-19 100.9 99 52.5
Actinidia34078 Actinidia chinensis HOM05D000196 ORTHO05D000279 2.4e-18 96.7 70 65.7
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 5.4e-18 95.5 218 29.8
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.0e-17 93.6 99 54.5
Lsat_1_v5_gn_2_15720 Lactuca sativa HOM05D001670 ORTHO05D016190 4.5e-17 92.4 94 51.1
Actinidia20637 Actinidia chinensis HOM05D001670 ORTHO05D010670 8.5e-16 88.2 168 37.5
MBI08_g34222_MAGBIO Magnolia biondii HOM05D000942 ORTHO05D010670 8.5e-16 88.2 43 88.4
Lsat_1_v5_gn_4_47640 Lactuca sativa HOM05D001670 ORTHO05D016190 1.2e-14 84.3 72 63.9
Lsat_1_v5_gn_1_88920 Lactuca sativa HOM05D000207 ORTHO05D001482 6.8e-13 78.6 84 48.8
Lsat_1_v5_gn_5_41360 Lactuca sativa HOM05D000207 ORTHO05D016190 4.1e-10 69.3 103 42.7
Actinidia06366 Actinidia chinensis HOM05D001670 ORTHO05D057084 9.2e-10 68.2 89 47.2
Lj4A515T32 Lonicera japonica HOM05D001670 ORTHO05D002980 1.6e-09 67.4 68 52.9


User provided reference genes

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