Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10522 Sapria himalayana HOM05D000113 ORTHO05D015269 2.2e-103 379.0 197 100.0
Potri.005G206500 Populus trichocarpa HOM05D000113 ORTHO05D007237 1.7e-26 123.6 143 50.3
Dinv01272 Davidia involucrata HOM05D000113 ORTHO05D007237 2.2e-26 123.2 143 48.3
CiPaw.03G197700 Carya illinoinensis HOM05D000113 ORTHO05D007237 9.1e-25 117.9 143 47.6
Sabra05G0157000 Salix brachista HOM05D000113 ORTHO05D007237 1.2e-24 117.5 143 49.0
Ciclev10033885m.g Citrus clementina HOM05D000113 ORTHO05D007237 1.5e-24 117.1 143 49.0
Actinidia15505 Actinidia chinensis HOM05D000113 ORTHO05D007237 2.0e-24 116.7 143 44.8
Solyc07g044930.3 Solanum lycopersicum HOM05D000113 ORTHO05D007237 2.6e-24 116.3 143 46.9
GSVIVG01020822001 Vitis vinifera HOM05D000113 ORTHO05D007237 4.5e-24 115.5 143 46.9
Cc05_g00880 Coffea canephora HOM05D000113 ORTHO05D007237 7.7e-24 114.8 145 42.8
Sopen07g023470 Solanum pennellii HOM05D000113 ORTHO05D007237 7.7e-24 114.8 143 46.2
CAN.G212.12 Capsicum annuum HOM05D000113 ORTHO05D007237 1.0e-23 114.4 143 46.2
DCAR_023041 Daucus carota HOM05D000113 ORTHO05D015269 1.3e-23 114.0 143 45.5
Gohir.A05G380800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 1.3e-23 114.0 143 44.8
Gorai.012G039300 Gossypium raimondii HOM05D000113 ORTHO05D007237 2.2e-23 113.2 143 45.5
Rhsim09G0210000 Rhododendron simsii HOM05D000113 ORTHO05D007237 2.2e-23 113.2 143 43.4
Nitab4.5_0001552g0100 Nicotiana tabacum HOM05D000113 ORTHO05D007237 5.0e-23 112.1 143 46.2
Thecc.01G166900 Theobroma cacao HOM05D000113 ORTHO05D007237 6.5e-23 111.7 143 44.8
TAR627G1069 Trochodendron aralioides HOM05D000113 ORTHO05D015269 6.5e-23 111.7 143 45.5
QL08p045486 Quercus lobata HOM05D000113 ORTHO05D007237 1.1e-22 110.9 143 45.5
SGA_v2.0_scaffold73G24473 Striga asiatica HOM05D001610 ORTHO05D007237 1.9e-22 110.2 143 44.1
Peaxi162Scf00359g01116 Petunia axillaris HOM05D000113 ORTHO05D007237 3.2e-22 109.4 143 45.5
MBI01_g38586_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D015269 5.5e-22 108.6 143 44.8
TAR626G1249 Trochodendron aralioides HOM05D000113 ORTHO05D007237 5.5e-22 108.6 143 43.4
Nitab4.5_0009366g0030 Nicotiana tabacum HOM05D000113 ORTHO05D007237 7.2e-22 108.2 143 44.1
MSTRG.14893 Avicennia marina HOM05D000113 ORTHO05D007237 9.4e-22 107.8 143 42.7
CSS0031269 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D007237 9.4e-22 107.8 143 42.0
Sc07g0004270 Simmondsia chinensis HOM05D000113 ORTHO05D007237 9.4e-22 107.8 143 45.5
COL.COLO4_29885 Corchorus olitorius HOM05D000113 ORTHO05D007237 1.2e-21 107.5 143 42.0
Hma1.2p1_0571F.1_g180920 Hydrangea macrophylla HOM05D000113 ORTHO05D015269 2.7e-21 106.3 143 43.4
TWI23G1117 Tripterygium wilfordii HOM05D000113 ORTHO05D007237 7.9e-21 104.8 143 43.4
Atru.chr6.2018 Acer truncatum HOM05D000113 ORTHO05D007237 2.3e-20 103.2 137 44.5
Gohir.D04G034800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 3.0e-20 102.8 135 44.4
Prupe.3G179000 Prunus persica HOM05D000113 ORTHO05D007237 1.1e-19 100.9 143 42.7
CsaV3_4G007530 Cucumis sativus L. HOM05D000113 ORTHO05D007237 1.5e-19 100.5 138 43.5
TPR.G8771 Trifolium pratense HOM05D000113 ORTHO05D007237 2.0e-19 100.1 144 43.1
Cpa.g.sc3138.1 Carica papaya HOM05D000113 ORTHO05D015269 3.3e-19 99.4 122 46.7
Eucgr.A02036 Eucalyptus grandis HOM05D000113 ORTHO05D007237 4.4e-19 99.0 143 41.3
Dinv24631 Davidia involucrata HOM05D000113 ORTHO05D007237 7.4e-19 98.2 122 45.9
ECA246G4989 Erigeron canadensis HOM05D001982 ORTHO05D007237 7.4e-19 98.2 145 42.8
Hund04309 Selenicereus undatus HOM05D000113 ORTHO05D015269 7.4e-19 98.2 143 39.9
Oeu012355.1 Olea europaea HOM05D000113 ORTHO05D007237 9.7e-19 97.8 137 40.1
Nn7g38061 Nelumbo nucifera HOM05D000113 ORTHO05D007237 1.7e-18 97.1 143 42.7
SalBow7G3963 Salvia bowleyana HOM05D000113 ORTHO05D007237 2.2e-18 96.7 145 42.1
CDE02G4043 Ceratophyllum demersum HOM05D000113 ORTHO05D007237 2.8e-18 96.3 150 42.7
arahy.Tifrunner.gnm1.ann1.JYPQ9N Arachis hypogaea HOM05D000113 ORTHO05D007237 3.7e-18 95.9 143 44.1
ClCG07G010790 Citrullus lanatus HOM05D000113 ORTHO05D007237 6.3e-18 95.1 143 42.0
Zm00001eb370170 Zea mays HOM05D000113 ORTHO05D007237 6.3e-18 95.1 144 40.3
CANSAT64G2939 Cannabis sativa HOM05D000113 ORTHO05D007237 8.2e-18 94.7 144 44.4
Lj8A98T44 Lonicera japonica HOM05D000113 ORTHO05D007237 8.2e-18 94.7 143 40.6
MD09G1146500 Malus domestica HOM05D000113 ORTHO05D007237 1.1e-17 94.4 143 40.6
VMungo0647G0573 Vigna mungo HOM05D000113 ORTHO05D007237 1.4e-17 94.0 143 40.6
Oeu033551.1 Olea europaea HOM05D000113 ORTHO05D007237 1.8e-17 93.6 143 38.5
THA.LOC104800815 Tarenaya hassleriana HOM05D000113 ORTHO05D007237 1.8e-17 93.6 145 40.0
AUR62003434 Chenopodium quinoa HOM05D000113 ORTHO05D007237 4.1e-17 92.4 144 38.9
arahy.Tifrunner.gnm1.ann1.UENS5B Arachis hypogaea HOM05D000113 ORTHO05D007237 5.3e-17 92.0 143 42.7
Migut.M00079 Erythranthe guttata HOM05D000113 ORTHO05D007237 9.1e-17 91.3 134 42.5
Phvul.008G196300 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 9.1e-17 91.3 143 40.6
Thhalv10016152m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 1.2e-16 90.9 147 36.7
unitig_0.g756 Utricularia gibba HOM05D000113 ORTHO05D007237 1.2e-16 90.9 143 38.5
ATR0763G161 Amborella trichopoda HOM05D000113 ORTHO05D007237 1.5e-16 90.5 143 39.2
Cfa023019 Carpinus fangiana HOM05D000113 ORTHO05D007237 1.5e-16 90.5 122 45.9
Os01g0767700 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D007237 2.0e-16 90.1 144 39.6
AL4G25730 Arabidopsis lyrata HOM05D000113 ORTHO05D007237 2.6e-16 89.7 147 38.1
LjContig00049g0026408 Lotus japonicus HOM05D000113 ORTHO05D007237 3.5e-16 89.4 143 43.4
HanXRQChr06g0170911 Helianthus annuus HOM05D000113 ORTHO05D007237 4.5e-16 89.0 145 38.6
RcHm_v2.0_Chr2g0152461 Rosa chinensis HOM05D000113 ORTHO05D007237 4.5e-16 89.0 139 41.0
Glyma.14G031600 Glycine max HOM05D000113 ORTHO05D007237 5.9e-16 88.6 146 42.5
HPP92_000953 Vanilla planifolia HOM05D000113 ORTHO05D007237 5.9e-16 88.6 143 37.8
Carub.0004s1201 Capsella rubella HOM05D000113 ORTHO05D007237 7.7e-16 88.2 149 38.9
CARHR124270 Cardamine hirsuta HOM05D000113 ORTHO05D007237 7.7e-16 88.2 147 37.4
Glyma.02G282700 Glycine max HOM05D000113 ORTHO05D007237 1.3e-15 87.4 143 38.5
Ca_06237_v3 Cicer arietinum L. HOM05D000113 ORTHO05D007237 1.7e-15 87.0 145 38.6
AUR62029411 Chenopodium quinoa HOM05D000113 ORTHO05D007237 2.2e-15 86.7 146 38.4
AT2G30800 Arabidopsis thaliana HOM05D000113 ORTHO05D007237 3.8e-15 85.9 147 36.1
Lsat_1_v5_gn_3_36540 Lactuca sativa HOM05D000113 ORTHO05D007237 5.0e-15 85.5 144 36.8
Lalb_Chr17g0348141 Lupinus albus HOM05D000113 ORTHO05D007237 5.0e-15 85.5 144 38.9
Aqoxy1G01493 Aquilegia oxysepala HOM05D000113 ORTHO05D007237 1.5e-14 84.0 148 38.5
Psat2g018200 Pisum sativum HOM05D000113 ORTHO05D007237 2.5e-14 83.2 143 37.1
BraA04t17875Z Brassica rapa HOM05D000113 ORTHO05D007237 4.2e-14 82.4 147 36.1
A04p23480 Brassica napus HOM05D000113 ORTHO05D007237 9.4e-14 81.3 147 35.4
BolC5t29258H Brassica oleracea HOM05D000113 ORTHO05D007237 9.4e-14 81.3 142 31.0
C05p04860 Brassica napus HOM05D000113 ORTHO05D007237 1.6e-13 80.5 142 31.0
SEGI_34167 Sequoiadendron giganteum HOM05D000113 ORTHO05D015269 2.1e-13 80.1 144 35.4
C04p59790 Brassica napus HOM05D000113 ORTHO05D007237 4.7e-13 79.0 152 34.9
BolC4t27489H Brassica oleracea HOM05D000113 ORTHO05D007237 4.7e-13 79.0 152 34.9
BcaB02g10343 Brassica carinata HOM05D000113 ORTHO05D007237 1.0e-12 77.8 147 34.0
FAN02G0673 Fragaria x ananassa HOM05D000113 ORTHO05D007237 1.8e-12 77.0 133 39.8
DCAR_016938 Daucus carota HOM05D000113 ORTHO05D015269 3.9e-12 75.9 144 34.0
Medtr5g090430 Medicago truncatula HOM05D000113 ORTHO05D007237 5.2e-12 75.5 144 35.4
FvH4_6g38870 Fragaria vesca HOM05D000113 ORTHO05D007237 6.7e-12 75.1 133 39.1
FAN05G5230 Fragaria x ananassa HOM05D000113 ORTHO05D007237 6.7e-12 75.1 133 39.1
FAN14G0921 Fragaria x ananassa HOM05D000113 ORTHO05D007237 6.7e-12 75.1 133 39.1
BcaB06g28386 Brassica carinata HOM05D000113 ORTHO05D007237 8.8e-12 74.7 144 33.3
PSO223G0056 Papaver somniferum HOM05D000113 ORTHO05D007237 8.8e-12 74.7 143 36.4
vmacro10163 Vaccinium macrocarpon HOM05D000113 ORTHO05D007237 8.8e-12 74.7 108 39.8
BraA05t20407Z Brassica rapa HOM05D000113 ORTHO05D007237 1.5e-11 73.9 144 34.0
Aa31LG5G6060 Aethionema arabicum HOM05D000113 ORTHO05D007237 4.4e-11 72.4 146 33.6
Ah.03g147070 Amaranthus hybridus HOM05D000113 ORTHO05D015269 4.4e-11 72.4 180 30.6
Duzib147G1700 Durio zibethinus HOM05D000113 ORTHO05D007237 5.7e-11 72.0 90 44.4
Sp1g05400 Schrenkiella parvula HOM05D000113 ORTHO05D007237 5.7e-11 72.0 161 30.4
FAN09G2677 Fragaria x ananassa HOM05D000113 ORTHO05D007237 1.3e-10 70.9 133 38.3
A05p14770 Brassica napus HOM05D000113 ORTHO05D007237 2.8e-10 69.7 144 32.6
PSO210G5614 Papaver somniferum HOM05D000113 ORTHO05D007237 3.7e-10 69.3 142 33.8
Mapoly0007s0204 Marchantia polymorpha HOM05D000113 ORTHO05D007237 6.3e-10 68.6 152 34.2
Sed0010586 Sechium edule HOM05D000113 ORTHO05D007237 1.4e-09 67.4 112 34.8
Thhalv10006566m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 3.1e-09 66.2 162 27.8
HanXRQChr17g0541371 Helianthus annuus HOM05D000113 ORTHO05D007237 4.1e-09 65.9 160 26.9
AagrBONN_evm.TU.Sc2ySwM_344.1049 Anthoceros agrestis HOM05D000113 ORTHO05D007237 1.2e-08 64.3 145 35.9
TAR626G1057 Trochodendron aralioides HOM05D000113 ORTHO05D015269 1.6e-08 63.9 106 37.7
HanXRQChr17g0541351 Helianthus annuus HOM05D000113 ORTHO05D007237 4.5e-08 62.4 170 27.1
Phvul.006G027200 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 1.5e-06 57.4 136 33.8
CARHR006350 Cardamine hirsuta HOM05D000113 ORTHO05D007237 4.2e-06 55.8 129 30.2
Carub.0001s0600 Capsella rubella HOM05D000113 ORTHO05D007237 7.2e-06 55.1 170 25.9
CBR_g50388 Chara braunii HOM05D000113 ORTHO05D007237 7.2e-06 55.1 168 31.5
Pp3c11_11510 Physcomitrium patens HOM05D000113 ORTHO05D007237 7.2e-06 55.1 153 29.4


User provided reference genes

Program Settings