Gene: Potri.005G206500
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.005G206500
- Transcript Identifier Potri.005G206500.2
- Gene Type Coding gene
- Location Chr05 : 21134818-21143494 : negative
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D007237
- #Genes/#Species 133/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Potri.005G206500.v4.1
- pacid 42803364
- synonym estExt_fgenesh4_pm.C_LG_V0477
Descriptions
- Description PTHR18934//PTHR18934:SF115 - ATP-DEPENDENT RNA HELICASE // NUCLEAR DEIH-BOXHELICASE-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT1G06670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G06670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR007502 | Helicase-associated domain |
| IPR036867 | R3H domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR001374 | R3H domain |
| IPR011709 | Domain of unknown function DUF1605 |
| IPR034083 | DExH-box ATP-dependent RNA helicase, R3H domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |