Gene: Solyc07g044930.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g044930.3
  • Transcript Identifier Solyc07g044930.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 57853556-57866809 : negative

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g044930.3.1
  • uniprot A0A3Q7H9M1
  • gene_id Solyc07g044930

Descriptions

  • Description DExH-box ATP-dependent RNA helicase DExH6-like (AHRD V3.3 *** A0A2I4HVT2_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G06670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR011709 Domain of unknown function DUF1605
IPR007502 Helicase-associated domain
IPR034083 DExH-box ATP-dependent RNA helicase, R3H domain
IPR036770 Ankyrin repeat-containing domain superfamily
IPR036867 R3H domain superfamily
IPR001374 R3H domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated