Gene: SGA_v2.0_scaffold73G24473
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold73G24473
- Transcript Identifier SGA_v2.0_scaffold73T24473
- Gene Type Coding gene
- Location scaffold73 : 1451256-1463412 : positive
Gene Family Information
- ID HOM05D001610
- #Genes/#Species 400/100
- Phylogenetic origin
- ID ORTHO05D007237
- #Genes/#Species 133/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product ATP-dependent RNA helicase, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT1G06670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G06670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001680 | WD40 repeat |
| IPR001650 | Helicase, C-terminal |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR011709 | Domain of unknown function DUF1605 |
| IPR001374 | R3H domain |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR036867 | R3H domain superfamily |
| IPR007502 | Helicase-associated domain |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR006594 | LIS1 homology motif |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.7 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID7 |