Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09123 Sapria himalayana HOM05D005655 ORTHO05D007386 5.7e-112 407.5 197 100.0
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 7.3e-67 257.7 209 60.8
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 4.0e-65 251.9 206 62.1
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 4.4e-64 248.4 206 60.2
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 5.8e-64 248.1 206 60.7
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 2.9e-63 245.7 209 58.9
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 3.8e-63 245.4 206 62.6
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 1.1e-62 243.8 211 59.7
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 1.9e-62 243.0 206 59.2
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 1.9e-62 243.0 205 59.0
vmacro21200 Vaccinium macrocarpon HOM05D005655 ORTHO05D007386 1.9e-62 243.0 206 57.8
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 7.1e-62 241.1 205 58.0
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 1.6e-61 240.0 206 57.8
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 3.5e-61 238.8 209 60.3
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 3.5e-61 238.8 206 57.3
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 4.6e-61 238.4 208 57.2
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 6.0e-61 238.0 206 59.7
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 6.0e-61 238.0 251 51.4
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 7.8e-61 237.7 207 57.0
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 1.7e-60 236.5 205 58.0
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 2.3e-60 236.1 206 59.7
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 2.3e-60 236.1 206 58.3
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 2.3e-60 236.1 207 57.0
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 3.0e-60 235.7 205 56.6
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 3.9e-60 235.3 206 58.3
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 3.9e-60 235.3 208 56.2
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 3.9e-60 235.3 210 56.7
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 1.1e-59 233.8 206 57.8
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 1.1e-59 233.8 206 56.3
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 1.9e-59 233.0 205 56.1
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 2.5e-59 232.6 206 57.8
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.5e-59 232.6 213 54.9
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 2.5e-59 232.6 206 57.8
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 2.5e-59 232.6 206 56.8
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 4.3e-59 231.9 206 56.8
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 5.6e-59 231.5 209 54.5
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 9.6e-59 230.7 207 58.0
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 1.3e-58 230.3 209 58.4
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 3.6e-58 228.8 208 54.8
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 4.8e-58 228.4 206 55.3
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 4.8e-58 228.4 207 54.6
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 8.1e-58 227.6 205 58.5
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 1.1e-57 227.3 206 55.3
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 3.1e-57 225.7 206 54.9
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 4.0e-57 225.3 206 54.9
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 5.3e-57 224.9 205 57.6
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 1.2e-56 223.8 207 56.0
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 2.6e-56 222.6 221 55.2
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 3.4e-56 222.2 207 57.0
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 5.8e-56 221.5 205 55.6
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 9.9e-56 220.7 206 57.3
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 2.2e-55 219.5 206 55.3
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 2.2e-55 219.5 205 55.1
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 2.9e-55 219.2 214 52.8
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 6.4e-55 218.0 205 55.1
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 4.2e-54 215.3 244 48.8
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 7.1e-54 214.5 175 60.0
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 7.1e-54 214.5 205 54.1
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 2.7e-53 212.6 175 60.0
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 3.5e-53 212.2 210 51.0
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 4.6e-53 211.8 207 50.7
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 6.0e-53 211.5 211 50.2
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 6.0e-53 211.5 208 51.4
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 1.0e-52 210.7 208 51.0
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 1.0e-52 210.7 208 51.0
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.0e-52 210.7 210 50.5
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 1.3e-52 210.3 207 51.2
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 1.8e-52 209.9 209 51.2
ECA247G4107 Erigeron canadensis HOM05D005655 ORTHO05D007386 3.9e-52 208.8 206 53.9
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 6.7e-52 208.0 206 52.9
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 8.7e-52 207.6 245 46.5
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 1.5e-51 206.8 207 49.8
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 1.9e-51 206.5 207 50.2
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 1.9e-51 206.5 169 58.0
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 1.9e-51 206.5 206 50.5
FAN15G2448 Fragaria x ananassa HOM05D005655 ORTHO05D007386 1.3e-50 203.8 185 58.4
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 1.6e-50 203.4 191 56.5
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 2.1e-50 203.0 205 49.8
DCAR_013167 Daucus carota HOM05D005655 ORTHO05D007386 1.4e-49 200.3 177 54.8
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 2.4e-49 199.5 210 51.0
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 2.4e-49 199.5 205 51.2
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 2.6e-48 196.1 175 53.7
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 4.5e-48 195.3 208 50.0
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 1.0e-47 194.1 188 55.3
Psat6g189760 Pisum sativum HOM05D005655 ORTHO05D007386 2.2e-47 193.0 175 54.3
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 1.9e-46 189.9 209 49.3
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 2.1e-45 186.4 191 52.9
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 1.3e-44 183.7 173 54.3
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 2.3e-44 183.0 145 58.6
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 2.5e-43 179.5 145 58.6
Sc13g0008190 Simmondsia chinensis HOM05D005655 ORTHO05D007386 8.2e-42 174.5 144 59.7
Lsat_1_v5_gn_1_5940 Lactuca sativa HOM05D005655 ORTHO05D007386 5.3e-41 171.8 145 55.9
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 5.8e-40 168.3 209 42.6
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 5.0e-39 165.2 145 55.2
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 1.0e-36 157.5 193 46.6
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 2.3e-36 156.4 209 42.1
Eucgr.J00222 Eucalyptus grandis HOM05D005655 ORTHO05D007386 4.3e-35 152.1 90 71.1
Eucgr.L00427 Eucalyptus grandis HOM05D005655 ORTHO05D007386 4.3e-35 152.1 90 71.1
Lalb_Chr02g0141651 Lupinus albus HOM05D005655 ORTHO05D007386 3.1e-33 146.0 141 56.0
SMO174G0185 Selaginella moellendorffii HOM05D005655 ORTHO05D007386 4.1e-33 145.6 143 49.7
MD05G1036800 Malus domestica HOM05D005655 ORTHO05D007386 2.0e-32 143.3 90 70.0
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis HOM05D005655 ORTHO05D007386 1.3e-31 140.6 205 38.0
Eucgr.F00074 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.2e-31 139.8 84 69.0
HPP92_027831 Vanilla planifolia HOM05D005655 ORTHO05D007386 9.7e-27 124.4 90 63.3
CBR_g31748 Chara braunii HOM05D005655 ORTHO05D007386 1.4e-25 120.6 194 38.1
MCO10G057 Micromonas commoda HOM05D005655 ORTHO05D007386 1.2e-24 117.5 148 44.6
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 4.5e-24 115.5 78 61.5
Cre02.g086050 Chlamydomonas reinhardtii HOM05D005655 ORTHO05D007386 7.7e-24 114.8 208 36.5
Glyma.20G171733 Glycine max HOM05D005655 ORTHO05D007386 1.1e-22 110.9 102 60.8
PRCOL_00002466 Prasinoderma coloniale HOM05D005655 ORTHO05D007386 4.2e-22 109.0 265 32.5
Actinidia17754 Actinidia chinensis HOM05D005655 ORTHO05D007386 9.4e-22 107.8 102 56.9
Lalb_Chr02g0141641 Lupinus albus HOM05D005655 ORTHO05D007386 1.6e-21 107.1 65 72.3
Actinidia17755 Actinidia chinensis HOM05D005655 ORTHO05D007386 7.9e-21 104.8 69 65.2
FAN24G0542 Fragaria x ananassa HOM05D005655 ORTHO05D007386 1.0e-20 104.4 105 55.2
Eucgr.I00104 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.3e-20 103.2 90 54.4
unitig_21.g20592 Utricularia gibba HOM05D005655 ORTHO05D007386 2.3e-20 103.2 72 61.1
CARHR033670 Cardamine hirsuta HOM05D005655 ORTHO05D007386 8.8e-20 101.3 66 62.1
SEGI_11089 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 1.3e-15 87.4 108 45.4
unitig_21.g20593 Utricularia gibba HOM05D005655 ORTHO05D007386 2.9e-15 86.3 120 41.7
TPR.G7160 Trifolium pratense HOM05D005655 ORTHO05D007386 5.0e-15 85.5 53 66.0
MD05G1036900 Malus domestica HOM05D005655 ORTHO05D007386 1.5e-14 84.0 84 54.8
Cfa024548 Carpinus fangiana HOM05D005655 ORTHO05D007386 3.3e-11 72.8 183 29.0
arahy.Tifrunner.gnm1.ann1.15WA1E Arachis hypogaea HOM05D005655 ORTHO05D007386 2.8e-10 69.7 161 34.2
Peaxi162Scf00226g00318 Petunia axillaris HOM05D003028 ORTHO05D003465 2.9e-07 59.7 37 67.6
HPP92_016851 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.5e-06 57.4 40 60.0


User provided reference genes

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