Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.3e-216 755.4 399 100.0
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 1.1e-130 470.7 323 71.5
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.9e-130 469.9 354 65.3
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 4.2e-130 468.8 354 65.3
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 3.0e-128 462.6 328 69.2
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 2.6e-127 459.5 325 68.6
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 5.7e-127 458.4 334 68.6
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 7.5e-127 458.0 323 69.3
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 9.8e-127 457.6 324 68.8
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 3.1e-125 452.6 358 64.2
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 5.4e-125 451.8 353 64.6
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 7.0e-125 451.4 323 68.1
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 1.6e-124 450.3 354 64.4
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 1.6e-124 450.3 334 66.2
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 2.0e-124 449.9 354 64.4
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 3.5e-124 449.1 332 66.3
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 3.5e-124 449.1 358 65.6
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 7.7e-124 448.0 335 68.1
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 7.7e-124 448.0 354 64.1
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.3e-123 447.2 325 68.9
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 1.7e-123 446.8 326 67.2
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 6.6e-123 444.9 357 63.9
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 1.1e-122 444.1 329 66.3
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 1.1e-122 444.1 338 64.5
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.5e-122 443.7 328 65.2
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 1.9e-122 443.4 353 63.5
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 5.6e-122 441.8 344 64.0
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 1.2e-121 440.7 326 67.2
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.2e-121 440.7 340 64.7
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 1.2e-121 440.7 331 64.4
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 1.6e-121 440.3 330 66.1
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.6e-121 440.3 325 68.3
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 4.7e-121 438.7 327 66.4
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 8.0e-121 438.0 326 66.6
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 8.0e-121 438.0 332 66.3
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.0e-120 437.6 354 63.0
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 1.0e-120 437.6 330 65.8
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.4e-120 437.2 331 65.6
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 1.8e-120 436.8 326 66.9
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.3e-120 436.4 332 66.0
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 2.3e-120 436.4 359 63.8
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 3.0e-120 436.0 331 65.6
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 4.0e-120 435.6 320 67.5
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 4.0e-120 435.6 343 65.0
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 5.2e-120 435.3 386 59.8
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 5.2e-120 435.3 323 65.9
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 5.2e-120 435.3 331 65.9
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.8e-120 434.9 331 65.3
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.2e-119 434.1 329 65.3
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.6e-119 433.0 336 63.7
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.6e-119 433.0 336 63.7
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 4.4e-119 432.2 348 62.6
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 5.7e-119 431.8 360 61.4
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 5.7e-119 431.8 325 65.5
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.7e-118 430.3 329 63.2
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 2.9e-118 429.5 348 61.8
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 2.9e-118 429.5 327 66.1
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 5.4e-117 425.2 328 64.3
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 9.2e-117 424.5 333 64.0
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.6e-116 423.7 315 66.3
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 7.8e-116 421.4 333 62.8
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 5.0e-115 418.7 361 59.8
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 5.0e-115 418.7 334 62.0
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 4.3e-114 415.6 323 64.7
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 2.1e-113 413.3 330 62.7
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 3.6e-113 412.5 315 65.7
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 1.8e-112 410.2 359 59.1
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 5.2e-112 408.7 339 63.1
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 6.8e-112 408.3 308 66.9
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 1.5e-111 407.1 334 62.3
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 2.6e-111 406.4 330 60.6
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 5.8e-111 405.2 334 62.0
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.1e-109 401.0 367 58.6
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 1.4e-109 400.6 345 61.7
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 5.4e-109 398.7 329 62.9
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 7.0e-109 398.3 310 62.9
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 1.2e-108 397.5 329 62.0
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 1.6e-108 397.1 362 58.8
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 2.3e-107 393.3 327 62.4
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 3.0e-107 392.9 331 61.0
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 3.0e-107 392.9 346 60.1
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 8.6e-107 391.3 326 61.7
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 1.9e-106 390.2 330 60.6
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.9e-106 390.2 323 61.3
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 5.6e-106 388.7 333 61.0
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 5.6e-106 388.7 361 57.9
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-105 387.1 323 61.9
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 3.6e-105 386.0 325 61.2
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 4.7e-105 385.6 317 62.8
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 6.2e-105 385.2 331 61.0
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 6.2e-105 385.2 359 57.9
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.1e-104 384.4 317 61.2
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 2.3e-104 383.3 279 67.4
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 4.0e-104 382.5 340 60.0
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.2e-103 380.9 332 60.2
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 2.6e-103 379.8 340 59.7
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 5.8e-103 378.6 323 59.4
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 7.5e-103 378.3 328 60.4
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.3e-102 377.5 256 72.3
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.7e-102 377.1 335 58.8
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 3.7e-102 375.9 332 59.0
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 4.9e-102 375.6 323 59.8
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 8.3e-102 374.8 329 59.0
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 4.1e-101 372.5 324 58.6
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 7.8e-100 368.2 329 58.1
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 6.6e-99 365.2 330 55.8
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.7e-94 350.5 331 54.1
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 2.2e-94 350.1 296 60.8
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 3.2e-93 346.3 354 51.4
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 3.5e-92 342.8 277 62.1
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 5.1e-91 339.0 199 78.4
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.5e-90 337.4 306 56.2
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 6.4e-86 322.0 214 72.9
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 2.7e-84 316.6 199 74.4
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 5.6e-74 282.3 199 68.3
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 7.4e-66 255.4 291 47.1
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 4.8e-65 252.7 358 41.3
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 8.4e-62 241.9 249 53.0
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 3.0e-59 233.4 206 54.4
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.1e-57 227.3 209 54.1
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 1.3e-49 201.4 119 74.8
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 1.3e-49 201.4 206 49.5
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 7.2e-45 185.7 267 43.1
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 2.7e-44 183.7 109 78.0
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 5.9e-39 166.0 91 80.2
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 1.7e-33 147.9 186 50.5
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 7.5e-26 122.5 83 69.9
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 1.6e-23 114.8 146 49.3
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 5.9e-23 112.8 69 75.4
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 1.0e-22 112.1 108 55.6
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 9.8e-18 95.5 85 57.6
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 1.3e-17 95.1 208 32.2
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 1.0e-11 75.5 58 63.8


User provided reference genes

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