Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03583 Striga asiatica HOM05D005238 ORTHO05D006337 7.7e-129 464.2 296 100.0
Oeu052006.1 Olea europaea HOM05D005238 ORTHO05D006337 3.8e-19 99.8 143 64.3
SGA_v2.0_scaffold186G40218 Striga asiatica HOM05D005238 ORTHO05D006337 5.5e-18 95.9 92 69.6
MSTRG.7059 Avicennia marina HOM05D005238 ORTHO05D006337 9.5e-18 95.1 107 69.2
Oeu003828.2 Olea europaea HOM05D005238 ORTHO05D006337 9.5e-18 95.1 297 41.4
SalBow8G4928 Salvia bowleyana HOM05D005238 ORTHO05D006337 2.8e-17 93.6 284 39.1
unitig_748.g7636 Utricularia gibba HOM05D005238 ORTHO05D006337 4.7e-17 92.8 168 56.5
Migut.M01557 Erythranthe guttata HOM05D005238 ORTHO05D006337 3.4e-15 86.7 60 81.7
Lj8A188G51 Lonicera japonica HOM05D005238 ORTHO05D006337 7.5e-15 85.5 81 69.1
Peaxi162Scf00018g00105 Petunia axillaris HOM05D005238 ORTHO05D006337 2.2e-14 84.0 143 59.4
vmacro11663 Vaccinium macrocarpon HOM05D005238 ORTHO05D006337 2.2e-14 84.0 91 57.1
Gorai.013G178100 Gossypium raimondii HOM05D005238 ORTHO05D006337 1.1e-13 81.6 143 51.7
Nitab4.5_0008429g0030 Nicotiana tabacum HOM05D005238 ORTHO05D006337 7.0e-13 79.0 97 68.0
GSVIVG01020424001 Vitis vinifera HOM05D005238 ORTHO05D006337 7.0e-13 79.0 61 75.4
AT1G16610 Arabidopsis thaliana HOM05D005238 ORTHO05D006337 2.7e-12 77.0 60 68.3
CSS0024118 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 3.5e-12 76.6 143 53.8
Dinv19619 Davidia involucrata HOM05D005238 ORTHO05D006337 3.5e-12 76.6 61 68.9
Duzib213G1032 Durio zibethinus HOM05D005238 ORTHO05D006337 3.5e-12 76.6 91 58.2
Rhsim06G0238800 Rhododendron simsii HOM05D005238 ORTHO05D006337 7.8e-12 75.5 60 71.7
Dinv42511 Davidia involucrata HOM05D005238 ORTHO05D006337 1.0e-11 75.1 88 54.5
CSS0017399 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 1.3e-11 74.7 81 58.0
CARHR017080 Cardamine hirsuta HOM05D005238 ORTHO05D006337 1.7e-11 74.3 143 51.0
Solyc10g005590.4 Solanum lycopersicum HOM05D005238 ORTHO05D006337 8.6e-11 72.0 60 70.0
Sopen10g001560 Solanum pennellii HOM05D005238 ORTHO05D006337 8.6e-11 72.0 60 70.0
Cc05_g16060 Coffea canephora HOM05D005238 ORTHO05D006337 1.5e-10 71.2 88 58.0
Duzib268G1788 Durio zibethinus HOM05D005238 ORTHO05D006337 1.5e-10 71.2 90 50.0
arahy.Tifrunner.gnm1.ann1.7NR7Q4 Arachis hypogaea HOM05D005238 ORTHO05D006337 1.9e-10 70.9 60 66.7
PGSC0003DMG400011240 Solanum tuberosum HOM05D005238 ORTHO05D006337 1.9e-10 70.9 60 68.3
AL1G28770 Arabidopsis lyrata HOM05D005238 ORTHO05D006337 2.5e-10 70.5 60 66.7
Gohir.D01G026750 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.5e-10 70.5 103 64.1
Gohir.D13G157300 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.5e-10 70.5 148 43.2
arahy.Tifrunner.gnm1.ann1.K2PXHZ Arachis hypogaea HOM05D005238 ORTHO05D006337 5.6e-10 69.3 60 65.0
Hma1.2p1_0334F.1_g128770 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 5.6e-10 69.3 61 63.9
Potri.011G143100 Populus trichocarpa HOM05D005238 ORTHO05D006337 1.2e-09 68.2 60 65.0
Cfa002698 Carpinus fangiana HOM05D005238 ORTHO05D006337 1.6e-09 67.8 88 50.0
BcaC07g38806 Brassica carinata HOM05D005238 ORTHO05D006337 2.1e-09 67.4 90 51.1
Haze_24974 Corylus avellana HOM05D005238 ORTHO05D006337 2.1e-09 67.4 88 50.0
Gohir.D01G026800 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.1e-09 67.4 103 63.1
MD10G1202400 Malus domestica HOM05D005238 ORTHO05D006337 2.1e-09 67.4 61 63.9
ECA240G2789 Erigeron canadensis HOM05D005238 ORTHO05D006337 3.6e-09 66.6 85 48.2
FvH4_3g15770 Fragaria vesca HOM05D005238 ORTHO05D006337 3.6e-09 66.6 111 55.0
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.6e-09 66.6 111 55.0
TAR627G0595 Trochodendron aralioides HOM05D005238 ORTHO05D006337 3.6e-09 66.6 78 51.3
Ca_03677_v3 Cicer arietinum L. HOM05D005238 ORTHO05D006337 4.7e-09 66.2 60 61.7
Manes.14G016200 Manihot esculenta HOM05D005238 ORTHO05D006337 4.7e-09 66.2 60 65.0
Sp1g14750 Schrenkiella parvula HOM05D005238 ORTHO05D006337 4.7e-09 66.2 60 61.7
TPR.G9757 Trifolium pratense HOM05D005238 ORTHO05D006337 4.7e-09 66.2 152 40.8
C05p14890 Brassica napus HOM05D005238 ORTHO05D006337 6.1e-09 65.9 60 61.7
BolC5t30204H Brassica oleracea HOM05D005238 ORTHO05D006337 6.1e-09 65.9 60 61.7
QL04p073782 Quercus lobata HOM05D005238 ORTHO05D006337 6.1e-09 65.9 60 63.3
BolC8t49374H Brassica oleracea HOM05D005238 ORTHO05D006337 8.0e-09 65.5 91 48.4
HanXRQChr03g0071621 Helianthus annuus HOM05D005238 ORTHO05D006337 8.0e-09 65.5 88 51.1
Psat1g011080 Pisum sativum HOM05D005238 ORTHO05D006337 8.0e-09 65.5 61 60.7
Manes.06G171800 Manihot esculenta HOM05D005238 ORTHO05D006337 1.4e-08 64.7 91 46.2
Sabra11G0127900 Salix brachista HOM05D001622 ORTHO05D007320 1.4e-08 64.7 60 61.7
PSO017G0328 Papaver somniferum HOM05D005238 ORTHO05D006337 3.0e-08 63.5 104 44.2
PSO170G0319 Papaver somniferum HOM05D005238 ORTHO05D006337 3.0e-08 63.5 104 44.2
BcaC05g25524 Brassica carinata HOM05D005238 ORTHO05D006337 4.0e-08 63.2 59 59.3
CANSAT80G2747 Cannabis sativa HOM05D005238 ORTHO05D006337 4.0e-08 63.2 92 57.6
Cpa.g.sc10.47 Carica papaya HOM05D005238 ORTHO05D006337 4.0e-08 63.2 61 59.0
Duzib187G0607 Durio zibethinus HOM05D005238 ORTHO05D006337 4.0e-08 63.2 61 59.0
C08p17490 Brassica napus HOM05D005238 ORTHO05D006337 5.2e-08 62.8 91 50.5
FAN21G1113 Fragaria x ananassa HOM05D005238 ORTHO05D006337 6.8e-08 62.4 96 59.4
Gohir.A13G153000 Gossypium hirsutum HOM05D005238 ORTHO05D006337 6.8e-08 62.4 61 59.0
Glyma.15G255400 Glycine max HOM05D005238 ORTHO05D006337 8.9e-08 62.0 61 57.4
Carub.0001s1636 Capsella rubella HOM05D005238 ORTHO05D006337 1.2e-07 61.6 60 60.0
Medtr2g069490 Medicago truncatula HOM05D005238 ORTHO05D006337 1.5e-07 61.2 61 62.3
MELO3C026965.2 Cucumis melo HOM05D005238 ORTHO05D006337 2.0e-07 60.8 57 59.6
MBI16_g40051_MAGBIO Magnolia biondii HOM05D005238 ORTHO05D006337 2.0e-07 60.8 61 55.7
Nn6g31521 Nelumbo nucifera HOM05D005238 ORTHO05D006337 2.0e-07 60.8 53 62.3
A06p12590 Brassica napus HOM05D005238 ORTHO05D006337 2.6e-07 60.5 59 62.7
BraA06t24421Z Brassica rapa HOM05D005238 ORTHO05D006337 2.6e-07 60.5 59 62.7
CiPaw.12G006900 Carya illinoinensis HOM05D005238 ORTHO05D006337 2.6e-07 60.5 88 48.9
ClCG11G016430 Citrullus lanatus HOM05D005238 ORTHO05D006337 2.6e-07 60.5 39 66.7
CsaV3_4G031880 Cucumis sativus L. HOM05D005238 ORTHO05D006337 2.6e-07 60.5 39 66.7
Atru.chr2.1794 Acer truncatum HOM05D005238 ORTHO05D006337 3.4e-07 60.1 61 60.7
BcaB07g32526 Brassica carinata HOM05D002708 ORTHO05D006337 3.4e-07 60.1 58 60.3
BraA08t35057Z Brassica rapa HOM05D000001 ORTHO05D000003 3.4e-07 60.1 59 59.3
A08p31340 Brassica napus HOM05D000001 ORTHO05D000003 4.4e-07 59.7 91 50.5
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 4.4e-07 59.7 98 62.2
Lalb_Chr20g0108761 Lupinus albus HOM05D005238 ORTHO05D006337 4.4e-07 59.7 61 55.7
Lj3g0001441 Lotus japonicus HOM05D005238 ORTHO05D006337 5.7e-07 59.3 61 55.7
BcaB03g13039 Brassica carinata HOM05D000001 ORTHO05D000003 7.5e-07 58.9 60 58.3
Lsat_1_v5_gn_7_65541 Lactuca sativa HOM05D005238 ORTHO05D006337 7.5e-07 58.9 58 65.5
Lalb_Chr25g0284971 Lupinus albus HOM05D005238 ORTHO05D006337 7.5e-07 58.9 52 59.6
Eucgr.F03179 Eucalyptus grandis HOM05D005238 ORTHO05D006337 9.8e-07 58.5 61 55.7
Phvul.005G056900 Phaseolus vulgaris HOM05D005238 ORTHO05D006337 9.8e-07 58.5 59 55.9
VMungo1080G1161 Vigna mungo HOM05D005238 ORTHO05D006337 9.8e-07 58.5 59 55.9
Glyma.08G172000 Glycine max HOM05D005238 ORTHO05D006337 1.3e-06 58.2 61 54.1
Thecc.07G152800 Theobroma cacao HOM05D005238 ORTHO05D006337 1.3e-06 58.2 86 51.2
THA.LOC104813616 Tarenaya hassleriana HOM05D005238 ORTHO05D006337 1.7e-06 57.8 61 59.0
Ciclev10020284m.g Citrus clementina HOM05D005238 ORTHO05D006337 2.2e-06 57.4 60 60.0
C08p44400 Brassica napus HOM05D005238 ORTHO05D006337 2.9e-06 57.0 61 57.4
RcHm_v2.0_Chr5g0026571 Rosa chinensis HOM05D005238 ORTHO05D006337 2.9e-06 57.0 92 60.9
TWI39G0564 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 3.7e-06 56.6 61 55.7
Aa31LG7G1130 Aethionema arabicum HOM05D005238 ORTHO05D006337 6.4e-06 55.8 51 58.8
Prupe.4G139800 Prunus persica HOM05D005238 ORTHO05D006337 6.4e-06 55.8 90 55.6
TWI38G1616 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 6.4e-06 55.8 61 57.4


User provided reference genes

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