Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 1.5e-219 765.8 365 100.0
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 8.8e-183 643.7 403 79.2
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 1.0e-178 630.2 386 78.8
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 2.2e-178 629.0 386 78.8
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 3.2e-177 625.2 386 77.7
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 2.1e-176 622.5 383 78.6
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 6.8e-175 617.5 386 77.7
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.5e-174 616.3 383 78.1
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 4.4e-174 614.8 391 76.0
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 7.5e-174 614.0 381 78.2
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.3e-173 613.2 383 78.3
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 2.2e-173 612.5 385 76.9
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 2.2e-173 612.5 385 76.9
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 2.8e-173 612.1 385 76.6
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 1.1e-172 610.1 386 76.7
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 2.0e-171 605.9 387 76.5
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 5.9e-171 604.4 378 76.2
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 5.9e-171 604.4 386 76.9
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 1.7e-170 602.8 384 75.5
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 2.9e-170 602.1 390 73.8
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 1.1e-169 600.1 391 75.4
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 2.5e-169 599.0 388 74.0
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 2.5e-169 599.0 390 74.6
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 9.4e-169 597.0 390 75.9
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 2.1e-168 595.9 387 74.4
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 2.1e-168 595.9 389 74.3
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 2.7e-168 595.5 387 75.2
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 1.0e-167 593.6 391 74.2
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 1.4e-167 593.2 382 74.9
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 3.0e-167 592.0 390 73.8
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 5.2e-167 591.3 383 74.2
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 6.8e-167 590.9 390 73.8
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 6.8e-167 590.9 386 73.6
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 1.2e-166 590.1 386 74.4
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 5.7e-166 587.8 377 75.3
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 5.7e-166 587.8 389 73.3
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 7.5e-166 587.4 386 73.6
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 9.8e-166 587.0 389 74.8
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 9.8e-166 587.0 396 73.2
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 2.8e-165 585.5 387 74.7
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 3.7e-165 585.1 392 73.2
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 6.3e-165 584.3 364 77.2
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 1.1e-164 583.6 389 74.3
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 1.4e-164 583.2 386 74.1
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 1.4e-164 583.2 391 73.9
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.8e-164 582.8 346 79.8
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 4.1e-164 581.6 390 73.1
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 5.4e-164 581.3 390 74.4
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 7.0e-164 580.9 390 74.4
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 9.1e-164 580.5 401 71.8
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 9.1e-164 580.5 394 74.1
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.2e-163 580.1 394 74.1
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 1.6e-163 579.7 425 68.0
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 2.7e-163 578.9 373 74.8
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.7e-163 578.9 394 74.1
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.5e-163 578.2 377 74.8
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.5e-163 578.2 377 74.8
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 4.5e-163 578.2 350 78.9
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.3e-162 575.9 395 73.7
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 3.3e-161 572.0 381 73.0
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 2.8e-160 568.9 423 67.6
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 3.6e-160 568.5 385 71.4
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 4.7e-160 568.2 357 76.2
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 8.0e-160 567.4 386 73.8
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.0e-159 567.0 402 69.4
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 1.3e-157 560.1 388 72.7
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.3e-157 560.1 393 71.2
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 4.9e-157 558.1 388 72.4
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 6.3e-157 557.8 358 75.1
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 2.4e-156 555.8 387 69.5
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 4.5e-155 551.6 392 71.7
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 1.0e-154 550.4 368 72.3
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 1.3e-154 550.1 385 69.6
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 2.3e-154 549.3 388 68.3
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 8.6e-154 547.4 392 70.7
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.1e-153 547.0 417 66.9
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 9.5e-153 543.9 385 69.4
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-152 543.1 385 68.8
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 2.8e-152 542.3 378 70.1
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 3.6e-152 542.0 385 69.1
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 4.7e-152 541.6 389 68.1
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 1.4e-151 540.0 388 68.3
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 1.8e-151 539.7 386 69.2
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 1.8e-151 539.7 386 69.2
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.8e-151 539.7 402 67.4
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 2.3e-151 539.3 381 68.8
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 2.3e-151 539.3 354 73.2
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 4.0e-151 538.5 341 74.2
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 1.2e-150 537.0 386 68.9
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 1.7e-149 533.1 385 68.1
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.3e-146 523.5 341 72.7
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 2.1e-144 516.2 390 66.7
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 3.6e-144 515.4 399 64.4
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 4.7e-144 515.0 315 77.8
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 2.3e-143 512.7 390 64.4
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 3.1e-143 512.3 360 68.9
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 4.0e-143 511.9 305 78.4
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 3.4e-142 508.8 379 66.8
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 5.8e-142 508.1 390 65.9
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 3.5e-139 498.8 347 67.1
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.6e-136 490.0 381 63.3
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 2.1e-136 489.6 383 62.7
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 4.7e-136 488.4 379 65.2
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.1e-135 487.3 348 71.6
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 9.9e-134 480.7 332 71.7
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 2.5e-129 466.1 354 66.7
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 1.1e-127 460.7 398 62.1
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 8.4e-125 451.1 283 74.9
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 4.4e-118 428.7 310 67.4
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 5.4e-116 421.8 289 72.3
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 2.3e-114 416.4 382 55.2
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 1.2e-107 394.0 304 64.1
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.1e-105 387.5 350 60.0
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.5e-105 386.3 363 54.3
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 4.3e-105 385.6 325 57.5
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 5.3e-103 378.6 240 76.2
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.9e-101 372.9 218 77.5
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 3.5e-99 365.9 323 53.3
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 5.8e-94 348.6 190 83.2
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.3e-90 336.7 277 62.1
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 3.3e-89 332.8 282 59.6
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 9.4e-84 314.7 317 52.7
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.4e-82 310.8 220 71.8
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 9.1e-71 271.6 259 56.4
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 2.3e-45 187.2 109 78.9
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 1.9e-44 184.1 134 69.4
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 9.5e-44 181.8 184 57.1
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 1.4e-34 151.4 291 35.1
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 2.0e-30 137.5 157 54.1
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 1.9e-28 131.0 76 80.3
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 1.5e-25 121.3 271 32.1
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 1.7e-24 117.9 120 57.5
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 2.4e-23 114.0 70 74.3
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 2.3e-21 107.5 210 35.7
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.9e-20 104.4 80 63.8
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 1.7e-16 91.3 52 78.8
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.1e-07 62.0 29 86.2
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 1.9e-07 61.2 75 52.0
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 4.6e-06 56.6 28 82.1


User provided reference genes

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