Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23193 Striga asiatica HOM05D000216 ORTHO05D000634 8.6e-146 520.4 279 100.0
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-10 71.6 57 66.7
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-10 71.6 57 66.7
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.6e-09 67.0 57 63.2
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.4e-09 66.2 57 63.2
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.3e-08 64.7 57 61.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-08 63.5 57 57.9
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 3.8e-08 63.2 57 59.6
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 6.4e-08 62.4 57 59.6
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 6.4e-08 62.4 57 57.9
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 6.4e-08 62.4 57 59.6
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 8.4e-08 62.0 57 56.1
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 8.4e-08 62.0 57 59.6
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 1.4e-07 61.2 57 57.9
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 1.4e-07 61.2 89 46.1
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.9e-07 60.8 57 54.4
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.9e-07 60.8 57 54.4
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-07 60.8 57 54.4
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.4e-07 60.5 43 72.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.2e-07 60.1 57 56.1
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 3.2e-07 60.1 57 57.9
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.2e-07 60.1 57 57.9
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.1e-07 59.7 57 54.4
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.1e-07 59.7 49 59.2
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.1e-07 59.7 57 54.4
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.1e-07 59.7 44 68.2
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.4e-07 59.3 57 54.4
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.4e-07 59.3 57 54.4
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.4e-07 59.3 57 54.4
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 7.1e-07 58.9 57 54.4
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 7.1e-07 58.9 46 65.2
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 7.1e-07 58.9 57 56.1
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 7.1e-07 58.9 119 37.8
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 7.1e-07 58.9 57 56.1
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 9.2e-07 58.5 57 56.1
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 9.2e-07 58.5 57 56.1
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 9.2e-07 58.5 57 56.1
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 9.2e-07 58.5 57 54.4
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 9.2e-07 58.5 45 60.0
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.2e-07 58.5 49 61.2
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 9.2e-07 58.5 57 56.1
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.2e-06 58.2 57 52.6
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.6e-06 57.8 57 56.1
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 1.6e-06 57.8 49 55.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.6e-06 57.8 57 54.4
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.6e-06 57.8 55 50.9
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.6e-06 57.8 62 53.2
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.1e-06 57.4 61 50.8
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 2.1e-06 57.4 57 56.1
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 2.1e-06 57.4 57 52.6
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-06 57.0 49 55.1
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-06 57.0 57 50.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-06 57.0 57 50.9
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-06 57.0 57 50.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.7e-06 57.0 57 50.9
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.7e-06 57.0 53 54.7
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 2.7e-06 57.0 49 55.1
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.5e-06 56.6 52 55.8
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.6e-06 56.2 49 53.1
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-06 56.2 57 54.4
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-06 56.2 57 54.4
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-06 56.2 57 54.4
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-06 56.2 57 54.4
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-06 56.2 57 54.4
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 4.6e-06 56.2 48 58.3
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 4.6e-06 56.2 48 58.3
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 4.6e-06 56.2 48 58.3
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 4.6e-06 56.2 48 58.3
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 4.6e-06 56.2 48 58.3
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 7.8e-06 55.5 57 56.1
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.8e-06 55.5 48 56.2


User provided reference genes

Program Settings