Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 3.2e-259 897.9 446 100.0
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 5.7e-208 727.6 436 82.6
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 7.2e-203 710.7 441 78.2
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.1e-198 696.8 443 78.3
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 4.2e-195 684.9 437 78.5
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 1.6e-194 682.9 445 76.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.6e-194 682.9 435 76.6
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 3.6e-194 681.8 435 78.2
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 7.9e-194 680.6 432 76.9
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 8.8e-193 677.2 435 77.5
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 9.1e-190 667.2 444 75.2
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.2e-189 666.8 436 75.5
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 3.5e-189 665.2 440 76.1
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 4.5e-189 664.8 419 76.1
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.3e-188 663.3 448 75.7
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 5.0e-188 661.4 410 77.6
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.4e-187 659.8 437 74.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 1.4e-187 659.8 442 75.6
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.9e-187 659.4 445 74.8
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.9e-187 659.4 441 71.9
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 2.5e-187 659.1 416 76.2
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.2e-187 658.7 407 76.7
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 3.2e-187 658.7 407 76.7
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 3.2e-187 658.7 416 75.7
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.2e-186 656.8 407 76.4
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.0e-185 653.7 437 72.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 5.2e-185 651.4 437 72.3
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 5.2e-185 651.4 452 71.2
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 8.8e-185 650.6 438 73.1
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.1e-184 650.2 441 71.2
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.5e-184 649.8 437 72.1
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 2.6e-184 649.0 415 74.7
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 3.3e-184 648.7 437 71.6
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.4e-184 647.5 437 71.4
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 2.8e-183 645.6 432 73.8
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.8e-182 642.9 419 74.0
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 5.3e-182 641.3 438 72.4
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 7.0e-182 641.0 407 74.9
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 9.1e-182 640.6 444 71.6
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.2e-181 640.2 438 71.9
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 2.6e-181 639.0 415 74.5
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 2.6e-181 639.0 417 73.1
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 3.5e-181 638.6 444 71.4
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.5e-181 638.3 394 81.5
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 5.9e-181 637.9 418 73.9
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 2.2e-180 636.0 444 71.2
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 3.8e-180 635.2 419 72.1
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 5.0e-180 634.8 434 72.1
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.2e-179 632.1 436 72.2
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.6e-178 629.8 408 73.3
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.7e-178 629.0 419 71.1
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 6.1e-178 627.9 413 73.1
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 8.0e-178 627.5 408 75.5
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.4e-177 626.7 410 73.2
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.8e-177 626.3 410 73.9
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 2.3e-177 625.9 445 68.3
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 4.0e-177 625.2 417 72.2
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 8.8e-177 624.0 419 70.9
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.2e-176 623.6 417 72.2
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.2e-176 623.6 421 70.5
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.2e-176 623.6 421 71.7
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 2.0e-176 622.9 417 71.9
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 5.7e-176 621.3 419 70.4
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 5.7e-176 621.3 417 71.7
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 5.7e-176 621.3 417 71.7
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 7.5e-176 620.9 417 71.9
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 1.3e-175 620.2 419 71.1
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.3e-175 620.2 418 69.6
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.3e-175 620.2 419 70.4
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.8e-175 619.0 419 71.1
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.8e-175 619.0 419 71.1
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 2.8e-175 619.0 417 71.5
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 4.8e-175 618.2 419 70.9
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 4.8e-175 618.2 419 70.9
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 4.8e-175 618.2 419 70.6
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.1e-174 617.1 417 71.0
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.4e-174 616.7 419 70.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 5.3e-174 614.8 418 71.3
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 7.0e-174 614.4 394 79.4
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 7.0e-174 614.4 414 69.3
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 1.6e-173 613.2 410 72.4
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 2.0e-173 612.8 420 69.5
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 3.5e-173 612.1 419 69.5
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 3.5e-173 612.1 410 72.2
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 2.2e-172 609.4 423 69.3
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 1.9e-163 579.7 383 73.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 8.9e-161 570.9 407 68.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 7.5e-160 567.8 402 66.7
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 2.8e-159 565.8 411 66.9
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.6e-157 560.1 370 72.7
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.7e-157 559.3 369 73.4
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 7.8e-157 557.8 378 72.5
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.3e-156 557.0 391 70.3
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 3.3e-155 552.4 342 77.5
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 2.2e-151 539.7 425 68.2
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 6.6e-148 528.1 343 71.7
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.2e-144 517.3 344 72.7
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 2.0e-144 516.5 353 70.0
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 3.4e-144 515.8 340 70.6
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 5.8e-144 515.0 401 59.6
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.1e-141 506.5 406 58.6
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 3.3e-139 499.2 337 69.4
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 3.6e-138 495.7 339 69.9
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 3.2e-134 482.6 342 67.5
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.2e-133 480.7 403 54.3
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 3.5e-133 479.2 303 76.9
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.5e-131 473.8 450 50.9
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 3.4e-128 462.6 313 73.8
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 4.5e-112 409.1 287 68.3
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 6.4e-103 378.6 244 79.1
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 3.0e-100 369.8 422 44.8
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 8.7e-100 368.2 266 68.0
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.3e-98 364.4 287 58.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 3.2e-94 349.7 419 43.7
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.8e-92 344.0 301 59.5
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 8.2e-82 308.5 202 76.7
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 6.1e-77 292.4 408 39.7
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 8.2e-66 255.4 451 34.8
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 9.4e-62 241.9 375 37.3
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 3.2e-54 216.9 342 38.0
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 6.2e-29 132.9 95 78.9
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.1e-28 132.1 90 64.4
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 2.0e-19 101.3 71 71.8
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 2.6e-19 100.9 94 53.2
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 2.9e-18 97.4 55 69.1
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 5.2e-12 76.6 114 38.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 6.8e-12 76.3 88 48.9
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 7.6e-11 72.8 55 65.5
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.4e-09 68.6 49 59.2


User provided reference genes

Program Settings