Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 5.3e-218 760.8 391 100.0
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 4.7e-158 561.6 381 77.2
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 2.2e-155 552.7 387 77.3
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.7e-152 543.1 388 74.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.1e-141 507.3 391 69.3
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.0e-140 503.1 382 72.0
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.0e-136 490.7 383 70.0
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 1.5e-135 486.9 382 68.8
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.5e-135 486.9 395 67.8
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.5e-135 486.1 392 68.1
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 3.3e-135 485.7 399 66.4
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 6.2e-134 481.5 370 70.0
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 8.1e-134 481.1 376 69.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.1e-133 480.7 388 67.0
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.1e-133 480.7 380 68.4
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.8e-133 479.9 389 66.3
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.8e-133 479.9 374 69.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.8e-133 479.9 365 71.5
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.4e-133 479.6 377 70.3
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.4e-133 479.6 421 64.1
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.8e-133 478.0 379 67.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.8e-133 478.0 379 67.0
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 2.2e-131 473.0 374 67.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 2.9e-131 472.6 388 64.9
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.9e-131 472.6 391 67.3
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 3.8e-131 472.2 387 66.7
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 8.4e-131 471.1 375 68.5
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.1e-130 470.7 408 64.5
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 1.4e-130 470.3 371 68.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.9e-130 469.9 377 67.1
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-130 469.5 376 66.8
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 3.2e-130 469.2 367 69.5
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 4.2e-130 468.8 376 66.8
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 5.4e-130 468.4 396 65.2
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 5.4e-130 468.4 374 69.0
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 5.4e-130 468.4 398 64.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.2e-129 467.2 384 65.6
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.5e-129 465.7 364 71.7
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 4.6e-129 465.3 395 66.1
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 7.8e-129 464.5 356 71.9
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 3.9e-128 462.2 395 65.6
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 3.3e-127 459.1 371 67.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 4.3e-127 458.8 396 63.9
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 4.3e-127 458.8 373 67.0
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 4.3e-127 458.8 373 67.0
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 4.3e-127 458.8 396 65.7
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 9.6e-127 457.6 320 72.8
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.3e-126 457.2 373 66.8
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.6e-126 455.7 397 64.2
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.1e-126 454.5 376 65.2
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.8e-125 453.4 375 67.2
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 4.0e-125 452.2 375 66.1
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 4.0e-125 452.2 375 66.1
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.0e-125 452.2 363 68.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 5.3e-125 451.8 444 58.8
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 3.4e-124 449.1 394 65.0
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 5.8e-124 448.4 390 63.1
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 9.9e-124 447.6 390 63.1
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.2e-123 446.4 387 65.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.8e-123 445.7 369 69.1
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 4.9e-123 445.3 386 64.5
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 4.9e-123 445.3 382 65.2
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 4.9e-123 445.3 386 65.0
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 6.4e-123 444.9 383 63.4
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 8.4e-123 444.5 385 62.3
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.4e-122 443.7 377 62.9
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 2.4e-122 443.0 361 68.1
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.4e-122 443.0 356 66.6
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 4.2e-122 442.2 403 62.8
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 9.3e-122 441.0 376 64.6
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 1.6e-121 440.3 376 63.8
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.5e-119 433.7 392 60.7
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 3.3e-119 432.6 392 62.8
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-118 429.1 328 71.3
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 1.1e-117 427.6 381 62.7
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.1e-117 427.6 389 60.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 4.0e-117 425.6 373 63.8
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 5.3e-117 425.2 276 79.0
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.9e-117 424.9 372 62.9
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.4e-116 422.5 291 75.3
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 3.5e-113 412.5 413 58.4
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 6.0e-113 411.8 269 77.0
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 4.8e-110 402.1 388 60.6
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 8.1e-110 401.4 222 87.8
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.8e-109 400.2 307 71.3
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.2e-108 397.5 291 71.1
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 4.5e-108 395.6 389 60.7
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.3e-107 394.0 283 71.7
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 3.8e-107 392.5 403 55.8
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 8.4e-107 391.3 309 68.9
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 4.2e-106 389.0 277 73.6
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.8e-104 383.6 301 68.4
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.5e-103 379.8 270 70.4
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 8.2e-102 374.8 407 54.1
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 4.8e-94 349.0 401 50.9
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 4.1e-93 345.9 271 69.0
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.5e-92 344.0 393 53.4
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 2.6e-92 343.2 226 75.2
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 6.7e-88 328.6 416 47.6
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 7.4e-87 325.1 306 56.5
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.2e-86 323.6 395 50.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.1e-85 321.2 256 68.0
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.3e-85 318.9 323 56.3
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 1.1e-82 311.2 234 69.7
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.2e-81 307.8 251 65.7
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.0e-80 304.7 388 51.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 4.1e-77 292.7 198 75.3
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.2e-70 270.4 140 92.1
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 5.9e-68 262.3 162 77.8
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.2e-65 254.6 244 56.1
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 8.3e-62 241.9 210 56.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.0e-57 225.3 299 49.2
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.8e-56 221.9 262 52.7
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.7e-44 183.7 154 65.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.9e-43 179.9 191 46.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.1e-41 174.1 313 34.2
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 2.3e-32 144.1 194 38.1
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 3.4e-31 140.2 160 50.6
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 3.3e-18 97.1 54 87.0
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.3e-11 75.1 93 50.5
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.3e-11 75.1 166 33.1
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.4e-08 65.1 34 85.3
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 7.6e-07 59.3 138 36.2


User provided reference genes

Program Settings