Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 0.0e+00 1773.8 926 100.0
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 0.0e+00 1159.1 899 69.3
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 1.1e-296 1023.5 836 65.6
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 5.7e-293 1011.1 915 61.4
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 4.6e-287 991.5 925 59.2
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.8e-286 989.6 936 58.0
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 6.7e-286 987.6 900 60.0
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 8.8e-286 987.3 831 64.6
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 2.5e-285 985.7 842 62.0
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 1.3e-284 983.4 836 62.0
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.7e-284 983.0 810 64.3
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 4.8e-284 981.5 931 59.0
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 7.7e-282 974.2 809 63.8
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 5.0e-281 971.5 947 57.3
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 8.5e-281 970.7 805 63.9
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 1.9e-280 969.5 791 64.3
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.9e-280 969.5 942 58.9
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 3.6e-279 965.3 955 58.4
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 5.7e-277 958.0 975 55.9
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 4.8e-276 954.9 937 58.3
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 6.3e-276 954.5 952 56.7
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 8.2e-276 954.1 925 57.7
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 1.2e-274 950.3 913 58.6
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 1.5e-274 949.9 799 63.2
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 2.0e-274 949.5 825 61.8
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 1.7e-273 946.4 895 58.3
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 2.2e-273 946.0 800 63.1
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 6.5e-273 944.5 917 57.4
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 7.2e-272 941.0 925 58.3
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 1.6e-271 939.9 877 60.2
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 2.3e-270 936.0 800 62.8
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 2.3e-270 936.0 900 59.0
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 3.9e-270 935.3 938 57.5
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 5.2e-270 934.9 801 62.4
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 6.7e-270 934.5 952 56.7
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 3.3e-269 932.2 906 58.2
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 5.7e-269 931.4 935 57.1
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 1.8e-267 926.4 844 59.0
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 1.7e-265 919.8 875 57.8
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 2.9e-265 919.1 835 59.9
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.9e-264 916.4 926 56.2
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 9.4e-264 914.1 835 59.3
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 6.1e-263 911.4 958 54.2
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.0e-262 910.6 809 59.7
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 1.0e-262 910.6 799 60.2
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 1.4e-262 910.2 942 55.6
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 4.0e-262 908.7 927 55.9
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 2.6e-261 906.0 804 61.3
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 4.4e-261 905.2 1001 53.3
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 7.5e-261 904.4 965 54.0
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 8.3e-260 901.0 809 59.2
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 1.8e-259 899.8 932 54.5
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 9.1e-259 897.5 943 54.3
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 2.0e-258 896.3 796 61.4
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 2.7e-258 896.0 819 59.6
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 1.0e-257 894.0 921 56.1
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 6.5e-257 891.3 921 54.5
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 4.2e-256 888.6 812 58.5
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 1.8e-254 883.2 937 54.5
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 8.8e-254 880.9 927 54.2
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 2.6e-253 879.4 746 64.2
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 1.3e-252 877.1 822 60.9
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 4.1e-251 872.1 800 59.8
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 5.4e-251 871.7 960 52.5
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 4.5e-250 868.6 818 58.3
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 5.9e-250 868.2 924 55.2
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.3e-249 867.1 817 58.3
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 1.3e-249 867.1 880 55.8
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 2.1e-247 859.8 893 53.6
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 2.3e-246 856.3 812 59.6
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 6.8e-246 854.7 845 56.0
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 1.7e-244 850.1 812 58.5
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 2.8e-244 849.4 933 53.9
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 1.8e-243 846.7 809 57.4
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 3.5e-242 842.4 819 58.2
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 3.5e-242 842.4 819 58.2
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 3.5e-242 842.4 939 54.3
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 2.9e-241 839.3 738 60.6
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 6.6e-241 838.2 1046 49.4
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 5.6e-240 835.1 805 57.8
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 7.3e-240 834.7 819 57.8
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 9.5e-240 834.3 812 58.3
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 2.1e-239 833.2 931 53.5
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 2.1e-239 833.2 816 56.6
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 8.0e-239 831.2 805 57.6
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 8.0e-239 831.2 829 56.7
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 3.1e-238 829.3 829 56.6
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 2.2e-236 823.2 816 56.5
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.9e-236 822.8 696 63.2
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 2.0e-234 816.6 916 52.6
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 1.1e-232 810.8 743 60.0
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 4.7e-231 805.4 829 57.1
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 3.4e-229 799.3 808 54.3
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 1.6e-223 780.4 924 49.4
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 4.9e-220 768.8 907 50.6
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 1.6e-218 763.8 829 53.1
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 4.4e-213 745.7 821 51.9
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.1e-190 671.4 861 47.6
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 5.7e-160 569.3 853 43.0
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 1.8e-158 564.3 498 60.4
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 1.5e-155 554.7 840 43.5
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 8.8e-145 518.8 831 40.7
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 8.9e-129 465.7 961 37.9
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 1.8e-126 458.0 508 52.4
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 2.0e-125 454.5 675 44.1
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 1.2e-117 428.7 442 54.8
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.3e-115 420.6 351 61.5
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 9.9e-88 329.3 1009 30.6
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 2.2e-87 328.2 226 73.5
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 2.5e-83 314.7 525 41.1
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 4.8e-58 230.7 719 28.8
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 4.6e-53 214.2 197 61.4
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 2.2e-47 195.3 349 39.0
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 1.8e-41 175.6 108 77.8
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 4.5e-40 171.0 107 78.5
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 8.8e-36 156.8 282 42.6
Psat4g067080 Pisum sativum HOM05D000251 ORTHO05D007889 7.0e-33 147.1 233 38.2
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 1.5e-30 139.4 89 79.8
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.6e-24 119.4 161 46.6
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.3e-23 116.3 806 25.1
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 6.5e-23 114.0 73 74.0
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 8.6e-15 87.0 292 36.3
Hma1.2p1_0690F.1_g203840 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 1.7e-10 72.8 47 76.6
Lsat_1_v5_gn_4_21520 Lactuca sativa HOM05D003221 ORTHO05D016847 3.0e-07 62.0 123 37.4
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 8.6e-07 60.5 96 34.4
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.1e-06 60.1 65 41.5
HPP92_003096 Vanilla planifolia HOM05D000251 ORTHO05D007889 1.9e-06 59.3 138 34.1
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 3.3e-06 58.5 89 38.2
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 3.3e-06 58.5 96 35.4
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 4.3e-06 58.2 89 37.1
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 4.3e-06 58.2 89 33.7
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 5.6e-06 57.8 89 34.8
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 7.3e-06 57.4 73 39.7
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 9.5e-06 57.0 88 35.2


User provided reference genes

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