Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 1.6e-72 276.6 207 100.0
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.9e-57 226.5 160 75.6
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 5.5e-57 224.9 160 76.9
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 5.5e-57 224.9 160 78.8
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 7.2e-57 224.6 160 73.8
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 1.2e-56 223.8 160 78.1
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 1.2e-56 223.8 160 78.1
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 4.7e-56 221.9 159 80.5
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 1.0e-55 220.7 160 84.4
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 6.8e-55 218.0 160 82.5
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 1.5e-54 216.9 160 79.4
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 1.5e-54 216.9 160 81.9
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.5e-54 216.9 159 85.5
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 2.0e-54 216.5 160 85.6
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 4.4e-54 215.3 157 81.5
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 7.5e-54 214.5 167 80.8
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 9.8e-54 214.2 160 84.4
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 9.8e-54 214.2 160 88.8
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 9.8e-54 214.2 160 86.9
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 1.3e-53 213.8 160 78.1
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 1.3e-53 213.8 157 89.2
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 1.3e-53 213.8 159 81.1
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 1.7e-53 213.4 153 86.9
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 2.2e-53 213.0 158 86.7
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 2.2e-53 213.0 110 90.0
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 2.8e-53 212.6 157 81.5
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 2.8e-53 212.6 157 81.5
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 2.8e-53 212.6 160 81.9
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.7e-53 212.2 162 79.6
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 4.8e-53 211.8 172 66.3
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 4.8e-53 211.8 210 76.2
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 4.8e-53 211.8 160 84.4
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 4.8e-53 211.8 159 86.8
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 4.8e-53 211.8 165 73.9
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 6.3e-53 211.5 161 88.2
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 6.3e-53 211.5 158 85.4
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 6.3e-53 211.5 159 83.0
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.1e-52 210.7 161 88.2
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 1.8e-52 209.9 164 74.4
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 1.8e-52 209.9 150 78.0
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 2.4e-52 209.5 158 86.7
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 2.4e-52 209.5 169 72.8
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 2.4e-52 209.5 159 80.5
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 2.4e-52 209.5 158 74.1
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 2.4e-52 209.5 161 80.7
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 3.1e-52 209.1 159 80.5
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 3.1e-52 209.1 160 83.1
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.1e-52 208.8 161 74.5
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.1e-52 208.8 154 84.4
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 4.1e-52 208.8 154 84.4
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 4.1e-52 208.8 160 83.8
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 5.4e-52 208.4 160 85.0
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 9.1e-52 207.6 156 83.3
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 9.1e-52 207.6 161 83.2
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 9.1e-52 207.6 160 80.0
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.2e-51 207.2 158 81.6
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 1.6e-51 206.8 154 81.8
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 1.6e-51 206.8 161 78.9
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.6e-51 206.8 154 83.8
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 2.0e-51 206.5 160 82.5
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 2.0e-51 206.5 158 82.3
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.0e-51 206.5 160 83.1
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 2.7e-51 206.1 164 73.8
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.7e-51 206.1 154 83.8
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 2.7e-51 206.1 154 83.8
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 2.7e-51 206.1 175 64.0
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 3.5e-51 205.7 107 89.7
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 3.5e-51 205.7 107 89.7
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 3.5e-51 205.7 150 89.3
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 3.5e-51 205.7 159 81.1
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 3.5e-51 205.7 160 80.6
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 4.5e-51 205.3 167 69.5
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 5.9e-51 204.9 159 80.5
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 5.9e-51 204.9 158 84.2
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 5.9e-51 204.9 154 83.8
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 7.7e-51 204.5 154 83.1
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 7.7e-51 204.5 171 66.1
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.0e-50 204.1 158 88.0
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 1.0e-50 204.1 159 76.1
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 1.0e-50 204.1 107 88.8
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.0e-50 204.1 161 79.5
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 1.7e-50 203.4 158 81.6
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 1.7e-50 203.4 157 79.0
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 1.7e-50 203.4 158 81.6
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 1.7e-50 203.4 158 81.6
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 1.7e-50 203.4 160 78.1
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 1.7e-50 203.4 160 81.2
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 1.7e-50 203.4 160 78.1
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 1.7e-50 203.4 160 78.1
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 2.3e-50 203.0 161 79.5
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 2.3e-50 203.0 161 79.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 2.3e-50 203.0 163 73.6
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 2.3e-50 203.0 160 75.6
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 2.9e-50 202.6 159 86.8
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 3.8e-50 202.2 156 78.8
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 3.8e-50 202.2 157 82.8
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 5.0e-50 201.8 163 81.6
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 6.5e-50 201.4 159 76.7
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 8.6e-50 201.1 175 66.3
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 8.6e-50 201.1 160 72.5
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.1e-49 200.7 161 78.9
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.1e-49 200.7 150 80.0
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.5e-49 200.3 160 82.5
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 1.9e-49 199.9 158 76.6
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 2.5e-49 199.5 159 77.4
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 2.5e-49 199.5 162 77.2
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 4.2e-49 198.7 174 74.1
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 4.2e-49 198.7 163 69.9
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 9.5e-49 197.6 159 73.0
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 1.2e-48 197.2 150 86.0
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 1.2e-48 197.2 162 78.4
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 1.6e-48 196.8 151 84.8
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.6e-48 196.8 162 76.5
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.1e-48 196.4 160 73.8
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 2.8e-48 196.1 160 75.6
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 2.8e-48 196.1 160 75.6
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 8.0e-48 194.5 160 75.6
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 8.0e-48 194.5 161 80.1
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.4e-47 193.7 108 82.4
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 1.8e-47 193.4 160 73.8
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 1.8e-47 193.4 158 75.3
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 1.8e-47 193.4 151 83.4
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 2.3e-47 193.0 152 78.3
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 3.0e-47 192.6 160 73.1
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 5.2e-47 191.8 156 83.3
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 6.8e-47 191.4 150 84.0
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 6.8e-47 191.4 150 84.0
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 8.9e-47 191.0 149 85.9
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 2.0e-46 189.9 150 78.0
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 2.6e-46 189.5 196 65.8
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 5.7e-46 188.3 99 85.9
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 5.7e-46 188.3 158 81.6
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 7.5e-46 188.0 151 84.8
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 7.5e-46 188.0 160 73.8
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 9.8e-46 187.6 156 80.1
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 2.2e-45 186.4 158 75.9
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 2.8e-45 186.0 150 78.7
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.8e-45 186.0 160 70.6
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 6.3e-45 184.9 94 91.5
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 1.1e-44 184.1 106 78.3
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 3.1e-44 182.6 91 93.4
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 7.0e-44 181.4 159 69.8
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 1.2e-43 180.6 108 78.7
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 1.6e-43 180.3 160 75.6
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 6.6e-42 174.9 162 74.1
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 8.6e-42 174.5 90 90.0
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.5e-41 173.7 97 81.4
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.5e-41 172.9 89 91.0
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 2.9e-37 159.5 81 88.9
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 1.0e-34 151.0 111 65.8
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 3.9e-34 149.1 127 64.6
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 3.3e-33 146.0 155 61.3
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 5.2e-31 138.7 80 78.8
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 1.1e-28 131.0 120 60.8
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 2.1e-27 126.7 60 98.3
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 7.8e-27 124.8 76 69.7
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 5.6e-25 118.6 93 65.6
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 5.2e-23 112.1 57 93.0
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 1.3e-21 107.5 94 53.2
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 6.4e-21 105.1 156 48.7
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 4.6e-19 99.0 114 52.6
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 6.0e-19 98.6 49 87.8
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.7e-18 97.1 114 51.8
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 1.6e-11 73.9 45 77.8
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 7.8e-11 71.6 89 51.7
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 1.3e-10 70.9 89 51.7
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 1.3e-10 70.9 89 51.7
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 6.6e-10 68.6 39 79.5
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-09 67.8 89 50.6
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-09 67.8 89 50.6
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-09 67.8 89 50.6
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 2.6e-06 56.6 35 68.6


User provided reference genes

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