Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 7.9e-64 246.9 120 100.0
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 2.4e-52 208.8 102 97.1
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 2.2e-50 202.2 102 92.2
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.1e-49 199.9 102 92.2
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 1.4e-49 199.5 102 92.2
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 1.4e-49 199.5 103 92.2
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 5.5e-49 197.6 102 88.2
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 5.5e-49 197.6 102 91.2
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 7.2e-49 197.2 102 90.2
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 9.4e-49 196.8 103 89.3
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.2e-48 196.4 102 91.2
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 1.6e-48 196.1 102 90.2
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 2.1e-48 195.7 102 91.2
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 2.1e-48 195.7 102 91.2
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 2.1e-48 195.7 113 82.3
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 2.1e-48 195.7 102 91.2
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 2.7e-48 195.3 102 90.2
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 3.6e-48 194.9 102 90.2
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 3.6e-48 194.9 102 90.2
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 3.6e-48 194.9 102 90.2
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 4.6e-48 194.5 102 89.2
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 4.6e-48 194.5 102 89.2
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 6.1e-48 194.1 102 87.3
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 1.0e-47 193.4 101 90.1
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.4e-47 193.0 102 87.3
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.8e-47 192.6 102 89.2
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.8e-47 192.6 102 88.2
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 1.8e-47 192.6 102 88.2
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 1.8e-47 192.6 102 89.2
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 1.8e-47 192.6 102 89.2
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 3.0e-47 191.8 102 89.2
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 3.0e-47 191.8 102 89.2
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 3.0e-47 191.8 102 88.2
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 84.3
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 86.3
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 86.3
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 90.2
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 89.2
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 86.3
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 3.9e-47 191.4 102 90.2
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 5.1e-47 191.0 102 86.3
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 5.1e-47 191.0 102 86.3
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 5.1e-47 191.0 102 87.3
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 6.7e-47 190.7 99 89.9
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 6.7e-47 190.7 102 88.2
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 8.8e-47 190.3 102 89.2
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.1e-46 189.9 102 87.3
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 1.1e-46 189.9 102 85.3
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 1.1e-46 189.9 102 87.3
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 1.1e-46 189.9 102 87.3
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 1.1e-46 189.9 102 87.3
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.5e-46 189.5 99 88.9
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 85.3
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 1.5e-46 189.5 102 87.3
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.0e-46 189.1 102 87.3
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 2.0e-46 189.1 102 87.3
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 2.0e-46 189.1 102 88.2
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 2.0e-46 189.1 102 87.3
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 2.5e-46 188.7 102 86.3
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 3.3e-46 188.3 102 86.3
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 3.3e-46 188.3 102 87.3
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 4.3e-46 188.0 102 83.3
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 4.3e-46 188.0 102 86.3
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 4.3e-46 188.0 102 85.3
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 5.7e-46 187.6 102 86.3
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 5.7e-46 187.6 102 83.3
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 7.4e-46 187.2 102 86.3
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 7.4e-46 187.2 102 87.3
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 9.7e-46 186.8 102 86.3
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 9.7e-46 186.8 102 86.3
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 9.7e-46 186.8 102 84.3
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 9.7e-46 186.8 102 86.3
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 9.7e-46 186.8 101 86.1
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 1.3e-45 186.4 102 83.3
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 1.3e-45 186.4 102 86.3
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 1.3e-45 186.4 102 83.3
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 1.7e-45 186.0 102 85.3
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 1.7e-45 186.0 102 85.3
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 2.8e-45 185.3 102 86.3
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 3.7e-45 184.9 105 85.7
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 4.8e-45 184.5 99 84.8
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 4.8e-45 184.5 102 86.3
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 6.3e-45 184.1 102 82.4
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 6.3e-45 184.1 102 84.3
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 8.2e-45 183.7 132 69.7
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 1.1e-44 183.3 102 82.4
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.4e-44 182.2 102 84.3
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 2.4e-44 182.2 102 81.4
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 2.4e-44 182.2 102 85.3
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 4.1e-44 181.4 102 85.3
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 5.3e-44 181.0 102 81.4
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 9.1e-44 180.3 102 82.4
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 9.1e-44 180.3 102 83.3
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 2.6e-43 178.7 102 79.4
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 3.4e-43 178.3 102 82.4
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 1.3e-42 176.4 103 82.5
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 1.4e-41 172.9 102 76.5
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 1.9e-41 172.6 102 80.4
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 2.1e-40 169.1 102 76.5
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 3.9e-39 164.9 102 74.5
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 1.1e-38 163.3 102 77.5
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 1.5e-38 162.9 102 73.5
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 3.7e-37 158.3 102 72.5
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 4.5e-35 151.4 83 81.9
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 1.4e-31 139.8 103 68.0
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 3.6e-24 115.2 104 61.5
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 8.0e-24 114.0 57 91.2
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 7.5e-22 107.5 102 52.9
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 8.3e-21 104.0 56 83.9
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 5.9e-19 97.8 104 46.2
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 7.2e-17 90.9 108 48.1
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.0e-15 87.0 45 93.3
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 3.0e-15 85.5 103 43.7
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 5.7e-14 81.3 74 60.8
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 2.8e-13 79.0 67 62.7
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.1e-12 75.5 42 85.7
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 8.6e-10 67.4 34 85.3
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 4.2e-09 65.1 102 35.3
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 4.7e-08 61.6 36 83.3
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 4.7e-08 61.6 36 83.3


User provided reference genes

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