Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39044 Striga asiatica HOM05D005775 ORTHO05D000023 6.6e-221 770.8 505 100.0
Migut.N02129 Erythranthe guttata HOM05D005775 ORTHO05D000023 4.4e-140 502.3 502 73.9
MSTRG.12583 Avicennia marina HOM05D005775 ORTHO05D000023 3.0e-125 453.0 505 68.3
Oeu047904.1 Olea europaea HOM05D005775 ORTHO05D000023 4.7e-118 429.1 490 68.6
Peaxi162Scf00517g00426 Petunia axillaris HOM05D005775 ORTHO05D000023 1.0e-117 427.9 458 64.2
SalBow2G0958 Salvia bowleyana HOM05D005775 ORTHO05D000023 3.5e-113 412.9 510 63.3
CAN.G438.46 Capsicum annuum HOM05D005775 ORTHO05D000023 1.3e-112 411.0 451 70.5
PGSC0003DMG400026158 Solanum tuberosum HOM05D005775 ORTHO05D000023 6.6e-112 408.7 440 71.6
Solyc07g053060.3 Solanum lycopersicum HOM05D005775 ORTHO05D000023 6.2e-110 402.1 451 67.6
Sopen07g026610 Solanum pennellii HOM05D005775 ORTHO05D000023 1.8e-109 400.6 440 70.7
Migut.O00883 Erythranthe guttata HOM05D005775 ORTHO05D000023 2.0e-108 397.1 390 78.2
Cc01_g19990 Coffea canephora HOM05D005775 ORTHO05D000023 3.4e-108 396.4 478 66.9
GSVIVG01011040001 Vitis vinifera HOM05D005775 ORTHO05D000023 1.1e-103 381.3 485 63.3
CSS0012831 Camellia sinensis var. sinensis HOM05D005775 ORTHO05D000023 1.5e-103 380.9 515 57.1
Haze_04786 Corylus avellana HOM05D005775 ORTHO05D000023 9.5e-103 378.3 480 58.1
Dinv32979 Davidia involucrata HOM05D005775 ORTHO05D000023 1.1e-101 374.8 515 63.1
Dinv11278 Davidia involucrata HOM05D005775 ORTHO05D000023 3.8e-99 366.3 510 60.0
Rhsim01G0278600 Rhododendron simsii HOM05D005775 ORTHO05D000023 6.4e-99 365.5 475 56.6
QL12p023176 Quercus lobata HOM05D005775 ORTHO05D000023 1.4e-98 364.4 472 64.2
Hma1.2p1_0209F.1_g089290 Hydrangea macrophylla HOM05D005775 ORTHO05D000023 2.7e-97 360.1 458 65.1
CiPaw.09G181700 Carya illinoinensis HOM05D005775 ORTHO05D000023 4.6e-97 359.4 450 66.0
Lj2C1182T1 Lonicera japonica HOM05D005775 ORTHO05D000023 6.0e-97 359.0 438 61.4
Prupe.8G249700 Prunus persica HOM05D005775 ORTHO05D000023 1.5e-95 354.4 476 55.9
Ciclev10019759m.g Citrus clementina HOM05D005775 ORTHO05D000023 3.6e-94 349.7 501 54.3
unitig_21.g20288 Utricularia gibba HOM05D005775 ORTHO05D000023 4.7e-94 349.4 483 61.7
Actinidia24301 Actinidia chinensis HOM05D005775 ORTHO05D000023 1.1e-93 348.2 502 54.4
Cpa.g.sc731.2 Carica papaya HOM05D005775 ORTHO05D000023 1.1e-93 348.2 499 58.9
Thecc.01G287300 Theobroma cacao HOM05D005775 ORTHO05D000023 5.2e-93 345.9 527 52.4
Sed0017897 Sechium edule HOM05D005775 ORTHO05D000023 6.4e-91 339.0 479 61.8
RcHm_v2.0_Chr6g0292231 Rosa chinensis HOM05D005775 ORTHO05D000023 1.4e-90 337.8 467 58.7
TAR365G0919 Trochodendron aralioides HOM05D005775 ORTHO05D000023 1.4e-90 337.8 511 58.9
Manes.01G212200 Manihot esculenta HOM05D005775 ORTHO05D000023 9.3e-90 335.1 453 58.7
ClCG00G000240 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.2e-89 334.7 471 62.4
ClCG10G003500 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.2e-89 334.7 471 62.4
Sc17g0003740 Simmondsia chinensis HOM05D005775 ORTHO05D000023 1.2e-89 334.7 506 56.5
MD03G1273200 Malus domestica HOM05D005775 ORTHO05D000023 6.0e-89 332.4 455 64.0
MELO3C014018.2 Cucumis melo HOM05D005775 ORTHO05D000023 6.6e-88 328.9 464 61.4
Gorai.004G084600 Gossypium raimondii HOM05D005775 ORTHO05D000023 1.5e-87 327.8 463 55.3
MBI18_g06533_MAGBIO Magnolia biondii HOM05D005775 ORTHO05D000023 3.3e-87 326.6 432 64.4
Rhsim13G0020300 Rhododendron simsii HOM05D005775 ORTHO05D000023 3.3e-87 326.6 507 58.0
Gohir.D08G079600 Gossypium hirsutum HOM05D005775 ORTHO05D000023 4.3e-87 326.2 463 55.1
Lalb_Chr17g0335721 Lupinus albus HOM05D005775 ORTHO05D000023 7.3e-87 325.5 452 55.8
Gohir.A08G071400 Gossypium hirsutum HOM05D005775 ORTHO05D000023 9.6e-87 325.1 463 55.1
vmacro02530 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 1.8e-85 320.9 426 56.6
Lj1g0019119 Lotus japonicus HOM05D005775 ORTHO05D000023 1.2e-84 318.2 458 54.4
Aqoxy2G03167 Aquilegia oxysepala HOM05D005775 ORTHO05D000023 3.4e-84 316.6 471 52.7
CANSAT25G1854 Cannabis sativa HOM05D005775 ORTHO05D000023 2.2e-83 313.9 452 63.1
FAN24G2890 Fragaria x ananassa HOM05D005775 ORTHO05D000023 8.4e-83 312.0 520 54.6
FAN15G0955 Fragaria x ananassa HOM05D005775 ORTHO05D000023 2.4e-82 310.5 443 59.8
FAN20G1843 Fragaria x ananassa HOM05D005775 ORTHO05D000023 3.2e-82 310.1 490 52.2
Hund05366 Selenicereus undatus HOM05D005775 ORTHO05D000023 3.2e-82 310.1 452 53.5
Glyma.03G148400 Glycine max HOM05D005775 ORTHO05D000023 4.2e-82 309.7 477 50.9
TWI14G1024 Tripterygium wilfordii HOM05D005775 ORTHO05D000023 4.2e-82 309.7 499 50.7
TAR636G1825 Trochodendron aralioides HOM05D005775 ORTHO05D000023 4.6e-81 306.2 434 63.4
COL.COLO4_08057 Corchorus olitorius HOM05D005775 ORTHO05D000023 6.0e-81 305.8 434 60.8
Eucgr.H01610 Eucalyptus grandis HOM05D005775 ORTHO05D000023 1.8e-80 304.3 430 60.5
Sed0008104 Sechium edule HOM05D005775 ORTHO05D000023 4.3e-79 299.7 497 55.5
Glyma.19G151700 Glycine max HOM05D005775 ORTHO05D000023 5.6e-79 299.3 477 50.5
CsaV3_3G003500 Cucumis sativus L. HOM05D005775 ORTHO05D000023 3.6e-78 296.6 448 60.7
DCAR_005831 Daucus carota HOM05D005775 ORTHO05D000023 6.2e-78 295.8 450 50.9
HanXRQChr09g0252061 Helianthus annuus HOM05D005775 ORTHO05D000023 8.1e-78 295.4 507 49.3
DCAR_002776 Daucus carota HOM05D005775 ORTHO05D000023 3.1e-77 293.5 441 53.1
AUR62037928 Chenopodium quinoa HOM05D005775 ORTHO05D000023 4.0e-77 293.1 384 60.4
Phvul.001G146400 Phaseolus vulgaris HOM05D005775 ORTHO05D000023 1.2e-76 291.6 464 55.0
Ah.08g220410 Amaranthus hybridus HOM05D005775 ORTHO05D000023 1.5e-76 291.2 447 58.2
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 3.4e-76 290.0 471 39.1
FAN27G3110 Fragaria x ananassa HOM05D005775 ORTHO05D000023 4.9e-75 286.2 487 50.5
VMungo1383G3055 Vigna mungo HOM05D005775 ORTHO05D000023 1.1e-74 285.0 496 51.0
Potri.016G119600 Populus trichocarpa HOM05D005775 ORTHO05D000023 2.4e-74 283.9 416 52.9
Ca_02584_v3 Cicer arietinum L. HOM05D005775 ORTHO05D000023 1.2e-73 281.6 491 55.8
Psat1g018400 Pisum sativum HOM05D005775 ORTHO05D000023 1.2e-73 281.6 431 58.2
arahy.Tifrunner.gnm1.ann1.84DKWJ Arachis hypogaea HOM05D005775 ORTHO05D000023 2.1e-73 280.8 476 55.9
Sabra16G0115500 Salix brachista HOM05D005775 ORTHO05D000023 3.5e-73 280.0 496 48.8
ATR0487G016 Amborella trichopoda HOM05D005775 ORTHO05D000023 7.9e-73 278.9 435 51.5
AUR62043492 Chenopodium quinoa HOM05D005775 ORTHO05D006285 3.0e-72 276.9 360 61.9
Atru.chr5.1309 Acer truncatum HOM05D005775 ORTHO05D000023 3.9e-72 276.6 426 63.1
Carub.0004s1199 Capsella rubella HOM05D005775 ORTHO05D000023 1.5e-71 274.6 420 51.9
HanXRQChr12g0362741 Helianthus annuus HOM05D005775 ORTHO05D000023 1.5e-71 274.6 427 52.9
THA.LOC104817539 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 1.9e-71 274.2 508 46.5
arahy.Tifrunner.gnm1.ann1.9RSW73 Arachis hypogaea HOM05D005775 ORTHO05D000023 1.3e-70 271.6 476 53.2
Aa31LG5G6080 Aethionema arabicum HOM05D005775 ORTHO05D000023 2.1e-70 270.8 421 52.5
CARHR124250 Cardamine hirsuta HOM05D005775 ORTHO05D000023 2.1e-70 270.8 421 51.3
Medtr5g076010 Medicago truncatula HOM05D005775 ORTHO05D000023 2.1e-70 270.8 431 50.8
BraA04t17874Z Brassica rapa HOM05D005775 ORTHO05D000023 3.7e-70 270.0 420 51.2
A04p23470 Brassica napus HOM05D005775 ORTHO05D000023 4.8e-70 269.6 420 51.9
TPR.G17547 Trifolium pratense HOM05D005775 ORTHO05D000023 6.2e-70 269.2 474 55.5
Medtr2g049540 Medicago truncatula HOM05D005775 ORTHO05D000023 8.1e-70 268.9 431 50.6
EL10Ac7g17159 Beta vulgaris HOM05D005775 ORTHO05D000023 1.1e-69 268.5 368 56.0
BolC4t27488H Brassica oleracea HOM05D005775 ORTHO05D000023 2.4e-69 267.3 420 51.2
C04p59780 Brassica napus HOM05D005775 ORTHO05D000023 3.1e-69 266.9 420 51.4
AT2G30780 Arabidopsis thaliana HOM05D005775 ORTHO05D000023 9.0e-69 265.4 445 48.8
ECA234G1745 Erigeron canadensis HOM05D005775 ORTHO05D000023 9.0e-69 265.4 442 49.8
THA.LOC104800814 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 1.5e-68 264.6 446 49.3
Aa31LG1G29420 Aethionema arabicum HOM05D005775 ORTHO05D000023 1.3e-67 261.5 487 50.9
Sp4g13280 Schrenkiella parvula HOM05D005775 ORTHO05D000023 1.3e-67 261.5 420 50.2
Thhalv10016605m.g Eutrema salsugineum HOM05D005775 ORTHO05D000023 2.2e-67 260.8 423 50.1
TPR.G16641 Trifolium pratense HOM05D005775 ORTHO05D000023 4.9e-67 259.6 431 56.8
PSO541G6072 Papaver somniferum HOM05D005775 ORTHO05D000023 2.5e-66 257.3 426 58.7
AL4G25710 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 5.5e-66 256.1 426 50.0
Atru.BG.65.p Acer truncatum HOM05D005775 ORTHO05D000023 1.0e-64 251.9 351 68.7
FvH4_2g24360 Fragaria vesca HOM05D005775 ORTHO05D000023 5.1e-64 249.6 440 58.6
Lsat_1_v5_gn_6_117561 Lactuca sativa HOM05D005775 ORTHO05D000023 5.7e-63 246.1 492 44.3
SHI15422 Sapria himalayana HOM05D005775 ORTHO05D000023 9.6e-63 245.4 366 38.5
AL4G25690 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 3.7e-62 243.4 397 51.1
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 3.7e-62 243.4 433 50.1
vmacro14952 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 6.3e-62 242.7 385 55.8
C04p19810 Brassica napus HOM05D005775 ORTHO05D000023 2.0e-60 237.7 422 35.1
PSO302G0009 Papaver somniferum HOM05D005775 ORTHO05D000023 4.2e-58 229.9 372 61.0
Os05g0407900 Oryza sativa ssp. japonica HOM05D005775 ORTHO05D000023 7.4e-55 219.2 438 45.7
Carub.0004s3072 Capsella rubella HOM05D005775 ORTHO05D000023 2.8e-54 217.2 464 37.7
Zm00001eb287820 Zea mays HOM05D005775 ORTHO05D000023 8.2e-54 215.7 434 50.0
AT2G48000 Arabidopsis thaliana HOM05D005775 ORTHO05D000023 1.4e-53 214.9 426 48.6
CARHR143390 Cardamine hirsuta HOM05D005775 ORTHO05D000023 3.4e-52 210.3 408 49.3
MD11G1295800 Malus domestica HOM05D005775 ORTHO05D000023 2.2e-51 207.6 207 54.6
Nn5g27607 Nelumbo nucifera HOM05D005775 ORTHO05D000023 1.2e-44 185.3 344 62.5
HPP92_003166 Vanilla planifolia HOM05D005775 ORTHO05D000023 2.0e-44 184.5 435 38.9
BcaB02g10341 Brassica carinata HOM05D005775 ORTHO05D000023 3.8e-43 180.3 422 40.3
PSO675G7470 Papaver somniferum HOM05D005775 ORTHO05D000023 6.5e-43 179.5 316 63.3
ClCG00G000230 Citrullus lanatus HOM05D005775 ORTHO05D000023 2.7e-41 174.1 156 55.1
CDE10G1068 Ceratophyllum demersum HOM05D005775 ORTHO05D000023 4.2e-34 150.2 182 46.7
MD11G1295900 Malus domestica HOM05D005775 ORTHO05D000023 1.2e-28 132.1 126 53.2
BolC4t23514H Brassica oleracea HOM05D005775 ORTHO05D000023 7.7e-28 129.4 119 52.1
Actinidia00716 Actinidia chinensis HOM05D005775 ORTHO05D000023 1.3e-27 128.6 248 37.1
Actinidia24862 Actinidia chinensis HOM05D005775 ORTHO05D000023 6.1e-25 119.8 316 28.8
AL4G47600 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 7.0e-21 106.3 140 42.1
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 3.7e-14 84.0 425 41.2
Nitab4.5_0006715g0010 Nicotiana tabacum HOM05D005775 ORTHO05D000023 4.5e-12 77.0 120 44.2
Pp3c2_3210 Physcomitrium patens HOM05D005775 ORTHO05D000023 3.6e-09 67.4 431 39.7
Solyc04g054270.4 Solanum lycopersicum HOM05D006414 ORTHO05D007780 6.1e-09 66.6 124 35.5
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 8.0e-09 66.2 125 34.4
Sopen04g023860 Solanum pennellii HOM05D006414 ORTHO05D007780 8.0e-09 66.2 124 35.5
PGSC0003DMG400012802 Solanum tuberosum HOM05D006414 ORTHO05D007780 8.0e-09 66.2 124 35.5
Pp3c1_37670 Physcomitrium patens HOM05D005775 ORTHO05D000023 1.4e-08 65.5 158 28.5
CAN.G382.6 Capsicum annuum HOM05D006414 ORTHO05D007780 1.8e-08 65.1 124 34.7
Oeu028531.1 Olea europaea HOM05D006414 ORTHO05D007780 4.0e-08 63.9 123 35.8
DCAR_000987 Daucus carota HOM05D006414 ORTHO05D007780 5.2e-08 63.5 129 39.5
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 5.2e-08 63.5 123 32.5
Lj3g0021087 Lotus japonicus HOM05D001779 ORTHO05D001753 6.8e-08 63.2 224 29.5
Nitab4.5_0002133g0010 Nicotiana tabacum HOM05D006414 ORTHO05D007780 6.8e-08 63.2 134 32.1
SalBow6G2882 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.2e-07 62.4 123 34.1
SalBow6G7209 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.2e-07 62.4 123 34.1
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 1.2e-07 62.4 123 34.1
PSO832G0330 Papaver somniferum HOM05D001779 ORTHO05D001753 1.5e-07 62.0 122 31.1
SalBow6G5148 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.5e-07 62.0 123 34.1
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 1.5e-07 62.0 123 34.1
SalBow6G2927 Salvia bowleyana HOM05D001779 ORTHO05D001753 3.4e-07 60.8 122 34.4
MSTRG.2541 Avicennia marina HOM05D006414 ORTHO05D007780 4.4e-07 60.5 123 33.3
Ciclev10020011m.g Citrus clementina HOM05D001779 ORTHO05D001753 4.4e-07 60.5 119 34.5
Lj2A560T64 Lonicera japonica HOM05D006414 ORTHO05D007780 4.4e-07 60.5 125 32.0
QL06p032569 Quercus lobata HOM05D006414 ORTHO05D007780 4.4e-07 60.5 125 32.8
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 5.7e-07 60.1 123 33.3
CiPaw.04G093800 Carya illinoinensis HOM05D006414 ORTHO05D007780 5.7e-07 60.1 123 33.3
Duzib138G0054 Durio zibethinus HOM05D001779 ORTHO05D001753 5.7e-07 60.1 122 32.8
MD03G1187700 Malus domestica HOM05D006414 ORTHO05D007780 7.5e-07 59.7 123 34.1
Potri.005G082400 Populus trichocarpa HOM05D006414 ORTHO05D007780 7.5e-07 59.7 124 32.3
CSS0011059 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 9.8e-07 59.3 123 31.7
CSS0026013 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 9.8e-07 59.3 123 31.7
Cc07_g15860 Coffea canephora HOM05D006414 ORTHO05D007780 9.8e-07 59.3 123 32.5
Dinv19510 Davidia involucrata HOM05D006414 ORTHO05D007780 1.3e-06 58.9 123 33.3
Migut.H02413 Erythranthe guttata HOM05D006414 ORTHO05D007780 1.3e-06 58.9 123 31.7
HanXRQChr07g0202341 Helianthus annuus HOM05D006414 ORTHO05D007780 1.3e-06 58.9 123 32.5
MD11G1203200 Malus domestica HOM05D006414 ORTHO05D007780 1.3e-06 58.9 122 34.4
Haze_14271 Corylus avellana HOM05D006414 ORTHO05D007780 1.7e-06 58.5 125 32.0
ECA232G3256 Erigeron canadensis HOM05D001779 ORTHO05D001753 1.7e-06 58.5 122 32.0
Ciclev10025440m.g Citrus clementina HOM05D006414 ORTHO05D007780 2.2e-06 58.2 123 33.3
ECA238G3570 Erigeron canadensis HOM05D006414 ORTHO05D007780 2.2e-06 58.2 123 33.3
Mapoly0072s0009 Marchantia polymorpha HOM05D005775 ORTHO05D000023 2.2e-06 58.2 111 32.4
Nitab4.5_0006715g0020 Nicotiana tabacum HOM05D005775 ORTHO05D000023 2.2e-06 58.2 53 54.7
Potri.002G243600 Populus trichocarpa HOM05D001779 ORTHO05D001753 2.9e-06 57.8 122 32.0
Sabra05G0067400 Salix brachista HOM05D006414 ORTHO05D007780 2.9e-06 57.8 124 31.5
HanXRQChr16g0501781 Helianthus annuus HOM05D001779 ORTHO05D001753 3.7e-06 57.4 226 27.9
EL10Ac6g14730 Beta vulgaris HOM05D006414 ORTHO05D007780 6.4e-06 56.6 124 33.1
AUR62003321 Chenopodium quinoa HOM05D006414 ORTHO05D007780 6.4e-06 56.6 123 30.9
AUR62016261 Chenopodium quinoa HOM05D006414 ORTHO05D007780 6.4e-06 56.6 123 30.9
AUR62043752 Chenopodium quinoa HOM05D006414 ORTHO05D007780 6.4e-06 56.6 123 30.9
unitig_28.g29440 Utricularia gibba HOM05D006414 ORTHO05D007780 6.4e-06 56.6 125 32.8
Nn1g05205 Nelumbo nucifera HOM05D006414 ORTHO05D007780 8.3e-06 56.2 120 31.7


User provided reference genes

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