Gene: AT2G30780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G30780
  • Transcript Identifier AT2G30780.1
  • Gene Type Coding gene
  • Location Chr2 : 13116547-13118059 : positive

Gene Family Information

  • ID HOM05D005775
  • #Genes/#Species 135/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G30780.1
  • uniprot O49343

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G48000.1); Has 13236 Blast hits to 5853 proteins in 219 species: Archae - 0; Bacteria - 7; Metazoa - 110; Fungi - 117; Plants - 12711; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0003729
IEA
InterPromRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR044179 Pentatricopeptide repeat-containing protein PPR5-like
Mapman id Description
35.1 not assigned.annotated