Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 0.0e+00 1328.9 646 100.0
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 0.0e+00 1152.1 647 85.8
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 0.0e+00 1141.3 649 84.7
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 0.0e+00 1134.4 646 84.5
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 0.0e+00 1121.3 649 84.3
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1117.8 651 82.3
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 0.0e+00 1115.9 651 83.1
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 0.0e+00 1111.3 651 82.3
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1109.0 650 81.7
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 0.0e+00 1108.2 651 82.0
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 0.0e+00 1107.0 649 82.3
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1107.0 651 82.0
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 0.0e+00 1105.9 650 81.8
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 0.0e+00 1105.9 649 82.3
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1105.9 651 82.0
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 0.0e+00 1105.9 648 82.3
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 0.0e+00 1104.7 651 81.7
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1104.0 649 81.4
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1102.8 649 81.7
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 0.0e+00 1101.7 651 81.1
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1101.3 651 81.7
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 0.0e+00 1101.3 652 81.3
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1100.9 650 81.4
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1100.9 647 82.2
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1100.9 652 81.6
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 0.0e+00 1100.9 649 81.5
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1099.7 652 81.4
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 0.0e+00 1099.7 647 81.9
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 0.0e+00 1099.3 650 81.5
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1099.3 648 81.2
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1099.0 648 81.3
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1099.0 649 82.1
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1098.2 651 81.0
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 0.0e+00 1098.2 650 80.6
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 0.0e+00 1098.2 650 80.6
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1097.8 650 81.4
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1097.8 648 81.5
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 0.0e+00 1097.0 649 81.2
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1097.0 648 81.3
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 0.0e+00 1097.0 648 81.3
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1096.3 648 81.6
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 0.0e+00 1094.7 647 80.5
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1094.7 647 80.8
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 0.0e+00 1094.3 645 80.8
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 0.0e+00 1094.0 647 81.6
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 0.0e+00 1094.0 650 80.6
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 0.0e+00 1093.6 646 81.3
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1093.6 648 80.6
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 0.0e+00 1091.6 649 80.7
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 0.0e+00 1090.9 648 80.9
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 0.0e+00 1090.5 652 80.5
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1090.5 651 80.8
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 0.0e+00 1090.1 651 79.7
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 0.0e+00 1089.7 643 81.2
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1089.7 650 80.2
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 0.0e+00 1089.3 648 80.6
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 0.0e+00 1089.3 631 81.6
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 0.0e+00 1088.9 645 80.2
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 0.0e+00 1088.9 631 81.5
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 0.0e+00 1088.6 652 81.1
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1087.0 612 83.7
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1087.0 648 80.2
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 0.0e+00 1087.0 645 80.8
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1086.6 651 80.5
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 0.0e+00 1085.1 648 79.6
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1085.1 652 80.7
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1085.1 652 80.7
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 0.0e+00 1084.7 647 79.6
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 0.0e+00 1084.3 647 79.3
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1083.6 647 80.4
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 0.0e+00 1083.2 644 81.1
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1082.4 651 80.0
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 0.0e+00 1081.6 642 81.2
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 0.0e+00 1079.7 649 79.8
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1079.3 648 80.7
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1078.9 719 74.5
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 0.0e+00 1077.0 649 79.0
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 4.4e-312 1074.7 648 80.6
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 4.4e-312 1074.3 653 79.5
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 4.4e-312 1073.9 651 79.1
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 4.4e-312 1073.5 651 79.3
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 4.4e-312 1073.5 650 78.5
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 8.8e-312 1073.2 648 79.0
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 1.3e-311 1072.4 646 80.3
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 1.8e-311 1072.0 642 81.2
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 4.0e-311 1070.8 650 79.1
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 8.8e-311 1069.7 651 79.0
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 1.1e-310 1069.3 643 79.6
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 1.5e-310 1068.9 648 79.5
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 3.4e-310 1067.8 653 78.7
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 4.4e-310 1067.4 650 79.2
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 4.4e-310 1067.4 650 79.2
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 1.7e-309 1065.4 650 79.4
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 4.8e-309 1063.9 650 79.2
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 1.1e-308 1062.8 650 78.8
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 1.4e-308 1062.4 597 83.4
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 7.7e-307 1056.6 591 85.1
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 1.0e-306 1056.2 640 79.2
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 6.5e-306 1053.5 649 78.6
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 8.5e-306 1053.1 591 83.2
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 2.7e-304 1048.1 649 78.4
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 5.7e-302 1040.4 595 84.0
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.2e-296 1022.7 584 82.4
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 4.8e-293 1010.7 595 80.0
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 3.1e-292 1008.1 586 81.7
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 3.5e-291 1004.6 646 76.6
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 1.5e-289 999.2 608 78.6
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 5.7e-286 987.3 542 85.6
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 2.8e-285 984.9 674 72.0
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 4.9e-285 984.2 570 81.1
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 4.5e-283 977.6 647 74.3
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 2.9e-282 974.9 557 82.4
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 4.0e-263 911.4 615 73.5
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 7.6e-246 854.0 476 85.5
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 4.9e-229 798.1 513 73.7
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 6.7e-194 681.4 582 59.5
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 5.7e-185 651.7 418 75.1
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 3.5e-182 642.5 388 79.4
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 2.7e-142 510.0 266 88.7
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.3e-123 448.0 557 47.4
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 2.2e-72 277.7 227 61.2
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 4.8e-67 260.0 125 92.8
Nn2g11394 Nelumbo nucifera HOM05D006184 ORTHO05D049308 1.1e-39 169.1 101 79.2
RcHm_v2.0_Chr5g0068691 Rosa chinensis HOM05D006184 ORTHO05D049308 9.5e-39 166.0 94 86.2
Nn2g11392 Nelumbo nucifera HOM05D006184 ORTHO05D007862 1.1e-37 162.5 152 53.3
Actinidia16074 Actinidia chinensis HOM05D006184 ORTHO05D007862 2.1e-30 138.3 153 54.9
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 1.0e-16 92.8 53 84.9
Hma1.2p1_0315F.1_g122560 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 1.1e-15 89.4 53 83.0
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 8.7e-08 63.2 32 84.4


User provided reference genes

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