Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 0.0e+00 1385.5 752 100.0
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 0.0e+00 1114.4 752 79.1
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 0.0e+00 1086.6 744 80.9
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 5.1e-312 1074.3 736 76.9
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 5.1e-310 1067.4 750 78.9
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 4.0e-299 1031.2 744 73.1
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 5.3e-299 1030.8 746 75.1
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 2.0e-298 1028.9 750 73.1
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 7.6e-298 1026.9 698 76.4
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 6.4e-297 1023.8 747 75.1
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 1.8e-294 1015.8 742 73.5
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 3.0e-294 1015.0 745 73.4
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 9.6e-293 1010.0 745 73.8
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.6e-292 1009.2 745 72.9
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.6e-292 1009.2 744 72.3
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.6e-292 1009.2 758 73.9
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 2.4e-291 1005.4 740 74.5
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 3.1e-291 1005.0 735 73.9
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 3.4e-290 1001.5 749 71.2
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 3.8e-289 998.0 743 73.6
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.4e-288 996.1 762 73.1
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 7.1e-288 993.8 799 67.3
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 2.1e-287 992.3 748 71.3
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 1.1e-285 986.5 739 72.7
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 1.5e-285 986.1 691 76.3
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 3.3e-285 984.9 744 73.0
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 1.6e-284 982.6 751 70.3
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 2.8e-284 981.9 743 71.3
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.4e-283 979.5 744 72.7
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 6.9e-283 977.2 742 71.0
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 9.0e-283 976.9 744 71.4
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 4.5e-282 974.5 736 71.2
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 4.5e-282 974.5 746 71.3
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 8.5e-281 970.3 742 71.7
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 2.1e-279 965.7 700 74.4
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 2.7e-279 965.3 744 71.0
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 2.7e-279 965.3 741 71.0
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 4.6e-279 964.5 743 72.1
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 4.6e-279 964.5 743 72.1
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 6.1e-279 964.1 745 70.3
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 5.1e-278 961.1 675 74.7
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 6.7e-278 960.7 743 70.4
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 8.7e-278 960.3 735 70.9
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 4.3e-277 958.0 738 70.6
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 1.3e-276 956.4 696 72.8
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 1.6e-276 956.1 740 73.9
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 2.2e-276 955.7 746 68.6
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 6.3e-276 954.1 737 68.7
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 6.3e-276 954.1 739 73.7
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 1.1e-275 953.4 749 70.1
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 1.4e-275 953.0 742 70.8
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 4.1e-275 951.4 746 70.6
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 4.1e-275 951.4 743 69.9
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 4.1e-275 951.4 740 70.3
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 4.1e-275 951.4 741 69.6
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 1.5e-274 949.5 749 70.2
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 2.2e-273 945.7 743 68.8
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 3.8e-273 944.9 739 72.5
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 5.0e-273 944.5 639 75.7
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.9e-272 942.6 746 70.6
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 7.2e-272 940.6 690 72.0
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 3.6e-271 938.3 671 73.6
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 6.1e-271 937.6 593 79.6
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 2.3e-270 935.6 674 73.7
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 3.0e-270 935.3 623 76.9
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 1.1e-269 933.3 731 68.3
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 2.6e-269 932.2 669 73.1
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 3.7e-268 928.3 739 72.1
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 6.3e-268 927.5 720 72.4
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.8e-267 926.0 702 69.8
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 4.1e-267 924.9 739 72.1
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 2.6e-266 922.2 745 71.3
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 1.0e-265 920.2 745 71.4
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 8.5e-265 917.1 784 65.4
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 1.6e-263 912.9 630 77.0
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 3.0e-262 908.7 669 71.9
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 3.0e-262 908.7 749 69.7
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 5.2e-262 907.9 671 71.7
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 6.7e-262 907.5 673 70.3
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 8.8e-262 907.1 647 75.7
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 6.3e-260 901.0 728 67.2
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 8.2e-260 900.6 725 67.9
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 4.1e-259 898.3 521 83.5
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 1.7e-257 892.9 509 85.5
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.9e-257 892.1 744 64.7
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 3.0e-254 882.1 739 62.8
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.4e-246 856.7 748 64.8
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 1.4e-246 856.7 742 63.9
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 4.4e-245 851.7 738 63.1
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 4.4e-245 851.7 485 84.5
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-243 847.0 758 65.3
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 2.7e-242 842.4 761 61.1
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 8.0e-239 830.9 741 63.8
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 4.9e-228 795.0 530 75.5
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.2e-226 790.4 543 76.4
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.5e-221 773.5 755 61.7
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 2.3e-214 749.6 582 64.3
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 7.1e-211 738.0 710 57.0
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.5e-208 729.6 696 57.9
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 3.1e-198 696.0 525 65.5
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.9e-196 689.5 409 80.9
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 4.0e-190 669.1 695 58.1
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 8.7e-185 651.4 345 89.3
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 2.8e-175 619.8 564 55.1
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.3e-169 600.1 483 60.5
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 1.5e-168 597.4 483 59.2
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.8e-166 590.5 368 78.3
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 8.2e-159 565.1 498 65.5
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.6e-154 550.8 565 60.4
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 8.2e-135 485.3 514 49.6
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 2.8e-127 460.3 499 53.9
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 8.9e-121 438.7 541 44.4
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.8e-118 431.0 255 77.6
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 2.1e-106 391.0 693 38.1
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 7.8e-101 372.5 214 84.6
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 1.2e-98 365.2 518 38.2
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 1.1e-89 335.5 179 88.8
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 5.2e-89 333.2 360 58.3
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 6.0e-85 319.7 263 65.0
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.6e-69 268.5 157 79.6
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 2.0e-64 251.5 372 50.5
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.4e-57 228.8 172 65.7
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.5e-46 191.4 328 41.2
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 5.1e-44 183.7 100 87.0
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 4.2e-38 164.1 222 50.9
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 2.7e-37 161.4 219 51.1
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.1e-33 149.4 293 42.0
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.4e-25 121.7 102 63.7
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.6e-24 119.0 86 72.1
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 8.0e-21 106.7 261 44.4
Sopen00g013530 Solanum pennellii HOM05D005363 ORTHO05D006607 4.7e-13 80.9 96 62.5
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.0e-12 79.7 199 46.2
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.8e-12 79.0 214 33.6
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 3.0e-12 78.2 88 50.0
GSVIVG01002726001 Vitis vinifera HOM05D005363 ORTHO05D006607 6.3e-10 70.5 175 33.7
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 9.1e-09 66.6 175 32.6
GSVIVG01001483001 Vitis vinifera HOM05D005363 ORTHO05D006607 8.6e-07 60.1 77 45.5


User provided reference genes

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