Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31339 Striga asiatica HOM05D005536 ORTHO05D006999 0.0e+00 1370.9 697 100.0
Migut.B00813 Erythranthe guttata HOM05D005536 ORTHO05D006999 1.4e-213 746.9 669 62.5
MSTRG.20308 Avicennia marina HOM05D005536 ORTHO05D006999 8.8e-208 727.6 672 59.4
SalBow8G1128 Salvia bowleyana HOM05D005536 ORTHO05D004100 1.5e-199 700.3 622 62.7
Oeu049828.1 Olea europaea HOM05D005536 ORTHO05D006999 2.4e-197 693.0 624 61.5
Solyc01g103950.4 Solanum lycopersicum HOM05D005536 ORTHO05D006999 4.3e-194 682.2 682 56.7
Nitab4.5_0000948g0240 Nicotiana tabacum HOM05D005536 ORTHO05D006999 8.0e-193 677.9 618 60.4
CAN.G798.23 Capsicum annuum HOM05D005536 ORTHO05D006999 2.0e-191 673.3 619 59.6
Peaxi162Scf00011g00635 Petunia axillaris HOM05D005536 ORTHO05D006999 2.0e-191 673.3 674 56.8
Sopen01g046340 Solanum pennellii HOM05D005536 ORTHO05D006999 4.4e-191 672.2 641 58.7
PGSC0003DMG401023772 Solanum tuberosum HOM05D005536 ORTHO05D006999 9.8e-191 671.0 677 56.3
Dinv19387 Davidia involucrata HOM05D005536 ORTHO05D006999 7.0e-189 664.8 633 58.6
unitig_749.g13511 Utricularia gibba HOM05D005536 ORTHO05D006999 1.0e-187 661.0 645 56.9
Manes.10G122900 Manihot esculenta HOM05D005536 ORTHO05D006999 8.6e-187 657.9 630 57.3
Hma1.2p1_1108F.1_g257740 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 7.3e-186 654.8 624 58.3
Thecc.02G089300 Theobroma cacao HOM05D005536 ORTHO05D006999 1.2e-185 654.1 673 55.3
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 1.1e-184 651.0 638 56.4
Cc02_g22780 Coffea canephora HOM05D005536 ORTHO05D006999 1.4e-184 650.6 620 58.9
QL02p099453 Quercus lobata HOM05D005536 ORTHO05D006999 5.2e-184 648.7 628 57.0
GSVIVG01023338001 Vitis vinifera HOM05D005536 ORTHO05D006999 7.5e-183 644.8 610 58.5
Gorai.013G038700 Gossypium raimondii HOM05D005536 ORTHO05D006999 1.7e-182 643.7 638 56.0
arahy.Tifrunner.gnm1.ann1.CHH5X5 Arachis hypogaea HOM05D005536 ORTHO05D006999 2.2e-182 643.3 626 56.1
MBI06_g20964_MAGBIO Magnolia biondii HOM05D005536 ORTHO05D006999 2.2e-182 643.3 632 56.6
Prupe.1G573200 Prunus persica HOM05D005536 ORTHO05D006999 2.2e-182 643.3 685 54.0
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 6.4e-182 641.7 656 54.6
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 6.4e-182 641.7 631 57.2
RcHm_v2.0_Chr7g0221201 Rosa chinensis HOM05D005536 ORTHO05D006999 1.9e-181 640.2 617 57.2
Lalb_Chr20g0123601 Lupinus albus HOM05D005536 ORTHO05D006999 2.4e-181 639.8 617 57.1
Haze_01749 Corylus avellana HOM05D005536 ORTHO05D006999 5.4e-181 638.6 626 56.7
ECA236G1742 Erigeron canadensis HOM05D005536 ORTHO05D006999 5.4e-181 638.6 626 56.4
arahy.Tifrunner.gnm1.ann1.DFQ1AC Arachis hypogaea HOM05D005536 ORTHO05D006999 7.1e-181 638.3 626 55.8
DCAR_025347 Daucus carota HOM05D005536 ORTHO05D006999 7.1e-181 638.3 652 56.3
Gohir.D13G034200 Gossypium hirsutum HOM05D005536 ORTHO05D006999 7.1e-181 638.3 638 55.8
Cfa005500 Carpinus fangiana HOM05D005536 ORTHO05D006999 9.2e-181 637.9 625 56.5
Ca_00061_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 1.2e-180 637.5 616 55.8
Ciclev10000782m.g Citrus clementina HOM05D005536 ORTHO05D006999 1.2e-180 637.5 625 56.0
Rhsim11G0127400 Rhododendron simsii HOM05D005536 ORTHO05D006999 1.2e-180 637.5 627 56.6
Psat1g222160 Pisum sativum HOM05D005536 ORTHO05D006999 2.7e-180 636.3 637 54.6
FvH4_5g28860 Fragaria vesca HOM05D005536 ORTHO05D006999 7.8e-180 634.8 625 56.3
CANSAT11G0651 Cannabis sativa HOM05D005536 ORTHO05D006999 1.0e-179 634.4 623 56.2
Lj5A254G85 Lonicera japonica HOM05D005536 ORTHO05D006999 1.0e-179 634.4 640 56.6
Medtr2g006350 Medicago truncatula HOM05D005536 ORTHO05D006999 2.3e-179 633.3 617 55.1
Atru.BG.35.p Acer truncatum HOM05D005536 ORTHO05D006999 3.0e-179 632.9 608 57.2
HanXRQChr16g0512011 Helianthus annuus HOM05D005536 ORTHO05D006999 3.0e-179 632.9 625 56.0
CiPaw.05G049900 Carya illinoinensis HOM05D005536 ORTHO05D006999 3.9e-179 632.5 622 56.6
Sabra03G0008600 Salix brachista HOM05D005536 ORTHO05D006999 5.1e-179 632.1 653 54.5
DCAR_006692 Daucus carota HOM05D005536 ORTHO05D006999 8.6e-179 631.3 627 56.3
Nn1g08381 Nelumbo nucifera HOM05D005536 ORTHO05D006999 9.5e-178 627.9 615 56.6
vmacro01743 Vaccinium macrocarpon HOM05D005536 ORTHO05D006999 9.5e-178 627.9 624 56.9
FAN04G2224 Fragaria x ananassa HOM05D005536 ORTHO05D006999 1.2e-177 627.5 625 55.7
Lsat_1_v5_gn_7_79100 Lactuca sativa HOM05D005536 ORTHO05D006999 1.6e-177 627.1 625 55.7
FAN08G1062 Fragaria x ananassa HOM05D005536 ORTHO05D006999 2.1e-177 626.7 625 55.7
VMungo0540G0609 Vigna mungo HOM05D005536 ORTHO05D006999 2.1e-177 626.7 610 56.6
Glyma.08G188200 Glycine max HOM05D005536 ORTHO05D006999 3.6e-177 625.9 661 52.8
Lj6g0001247 Lotus japonicus HOM05D005536 ORTHO05D006999 6.2e-177 625.2 622 55.5
ClCG11G000890 Citrullus lanatus HOM05D005536 ORTHO05D006999 1.1e-176 624.4 638 55.2
TPR.G2082 Trifolium pratense HOM05D005536 ORTHO05D006999 1.1e-176 624.4 617 54.6
PSO170G4094 Papaver somniferum HOM05D005536 ORTHO05D006999 1.8e-176 623.6 623 55.9
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 1.8e-176 623.6 616 55.4
FAN13G0194 Fragaria x ananassa HOM05D005536 ORTHO05D006999 2.3e-176 623.2 650 54.0
PSO017G0725 Papaver somniferum HOM05D005536 ORTHO05D006999 6.8e-176 621.7 621 55.9
TWI59G0084 Tripterygium wilfordii HOM05D005536 ORTHO05D006999 1.5e-175 620.5 616 56.7
Eucgr.G00559 Eucalyptus grandis HOM05D005536 ORTHO05D006999 2.9e-174 616.3 635 54.5
Glyma.12G169900 Glycine max HOM05D005536 ORTHO05D006999 1.1e-173 614.4 613 54.3
Phvul.006G216300 Phaseolus vulgaris HOM05D005536 ORTHO05D006999 1.9e-173 613.6 614 55.4
CSS0004244 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 1.0e-171 607.8 609 56.3
Aqoxy5G01212 Aquilegia oxysepala HOM05D005536 ORTHO05D006999 1.3e-171 607.4 616 55.5
MELO3C022605.2 Cucumis melo HOM05D005536 ORTHO05D006999 1.3e-171 607.4 636 53.8
Sc18g0006730 Simmondsia chinensis HOM05D005536 ORTHO05D006999 1.3e-171 607.4 630 53.5
Sed0010884 Sechium edule HOM05D005536 ORTHO05D006999 2.3e-171 606.7 656 52.7
CsaV3_5G012850 Cucumis sativus L. HOM05D005536 ORTHO05D006999 1.1e-170 604.4 625 54.1
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 1.1e-170 604.4 641 53.4
Ah.03g139170 Amaranthus hybridus HOM05D005536 ORTHO05D006999 1.5e-170 604.0 617 55.1
Actinidia39023 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.2e-167 594.3 616 55.7
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 1.5e-167 594.0 627 53.1
MD15G1428400 Malus domestica HOM05D005536 ORTHO05D006999 4.4e-167 592.4 711 50.9
AUR62003134 Chenopodium quinoa HOM05D005536 ORTHO05D006999 7.6e-167 591.7 630 54.0
Carub.0001s2244 Capsella rubella HOM05D005536 ORTHO05D006999 1.3e-166 590.9 616 53.7
THA.LOC104806870 Tarenaya hassleriana HOM05D005536 ORTHO05D006999 1.1e-165 587.8 616 53.7
BraA09t39668Z Brassica rapa HOM05D005536 ORTHO05D006999 1.4e-165 587.4 629 53.3
Zm00001eb138710 Zea mays HOM05D005536 ORTHO05D006999 1.4e-165 587.4 665 50.7
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 1.9e-165 587.0 624 52.9
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 1.9e-165 587.0 626 53.7
Thhalv10007358m.g Eutrema salsugineum HOM05D005536 ORTHO05D006999 2.4e-165 586.6 616 53.6
ATR1136G209 Amborella trichopoda HOM05D005536 ORTHO05D006999 9.3e-165 584.7 645 51.5
C05p22080 Brassica napus HOM05D005536 ORTHO05D006999 9.3e-165 584.7 638 52.7
BolC5t30904H Brassica oleracea HOM05D005536 ORTHO05D006999 2.7e-164 583.2 638 52.5
Aa31LG7G6950 Aethionema arabicum HOM05D005536 ORTHO05D006999 3.5e-164 582.8 643 51.3
BcaB07g32292 Brassica carinata HOM05D005536 ORTHO05D006999 4.6e-164 582.4 625 52.5
BcaC05g26200 Brassica carinata HOM05D005536 ORTHO05D006999 6.0e-164 582.0 638 52.5
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 2.3e-163 580.1 615 52.4
CARHR023320 Cardamine hirsuta HOM05D005536 ORTHO05D006999 1.5e-162 577.4 629 52.9
AUR62007953 Chenopodium quinoa HOM05D005536 ORTHO05D006999 1.4e-160 570.9 604 53.6
SEGI_00443 Sequoiadendron giganteum HOM05D005536 ORTHO05D006999 2.3e-155 553.5 636 49.1
HPP92_027057 Vanilla planifolia HOM05D005536 ORTHO05D006999 3.0e-155 553.1 650 48.9
Atru.chr6.551 Acer truncatum HOM05D005536 ORTHO05D006999 8.7e-155 551.6 560 53.8
COL.COLO4_11769 Corchorus olitorius HOM05D005536 ORTHO05D006999 4.3e-154 549.3 651 48.5
Nitab4.5_0002698g0120 Nicotiana tabacum HOM05D005536 ORTHO05D006999 1.4e-152 544.3 592 52.7
HPP92_011418 Vanilla planifolia HOM05D005536 ORTHO05D006999 4.2e-149 532.7 607 49.6
Pp3c1_39340 Physcomitrium patens HOM05D005536 ORTHO05D006999 9.6e-146 521.5 614 47.6
Mapoly0071s0067 Marchantia polymorpha HOM05D005536 ORTHO05D006999 2.4e-136 490.3 629 46.4
SMO244G0051 Selaginella moellendorffii HOM05D005536 ORTHO05D006999 2.4e-136 490.3 612 46.7
FAN18G3948 Fragaria x ananassa HOM05D005536 ORTHO05D006999 7.6e-135 485.3 517 51.3
CDE04G3554 Ceratophyllum demersum HOM05D005536 ORTHO05D006999 2.8e-121 440.3 614 41.7
Hma1.2p1_1108F.1_g257730 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 5.3e-120 436.0 388 63.4
Hma1.2p1_3213F.1_g334040 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 1.1e-109 401.7 428 57.0
AagrBONN_evm.TU.Sc2ySwM_228.4801 Anthoceros agrestis HOM05D005536 ORTHO05D006999 9.4e-101 372.1 522 43.1
Cre08.g365600 Chlamydomonas reinhardtii HOM05D005536 ORTHO05D006999 3.5e-95 353.6 665 36.8
Hund15496 Selenicereus undatus HOM05D005536 ORTHO05D006999 2.0e-87 327.8 322 54.3
Zm00001eb264810 Zea mays HOM05D005536 ORTHO05D006999 7.3e-85 319.3 342 52.0
Cpa.g.c34456.1 Carica papaya HOM05D005536 ORTHO05D006999 9.5e-69 265.8 184 70.1
CsaV3_5G012700 Cucumis sativus L. HOM05D005536 ORTHO05D006999 5.8e-66 256.5 409 42.3
MD08G1236400 Malus domestica HOM05D005536 ORTHO05D006999 3.2e-64 250.8 346 44.2
Ca_00038_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 1.5e-58 231.9 231 52.4
PGR044G0806 Punica granatum HOM05D005536 ORTHO05D006999 2.2e-57 228.0 149 73.2
Actinidia27730 Actinidia chinensis HOM05D005536 ORTHO05D006999 2.4e-56 224.6 142 72.5
Actinidia00197 Actinidia chinensis HOM05D005536 ORTHO05D006999 7.1e-56 223.0 585 32.0
Cpa.g.sc31.109 Carica papaya HOM05D005536 ORTHO05D006999 1.7e-54 218.4 168 64.9
CBR_g6345 Chara braunii HOM05D005536 ORTHO05D006999 4.0e-43 180.6 159 57.9
MD15G1428300 Malus domestica HOM05D005536 ORTHO05D006999 6.4e-41 173.3 135 74.1
CBR_g6347 Chara braunii HOM05D000019 ORTHO05D000800 1.9e-40 171.8 262 40.8
Cpa.g.sc31.106 Carica papaya HOM05D005536 ORTHO05D006999 1.2e-39 169.1 129 72.9
EL10Ac6g14966 Beta vulgaris HOM05D005536 ORTHO05D006999 7.9e-39 166.4 118 66.9
Os12g0192500 Oryza sativa ssp. japonica HOM05D005536 ORTHO05D006999 1.6e-31 142.1 115 67.0
CsaV3_5G012690 Cucumis sativus L. HOM05D005536 ORTHO05D006999 6.7e-30 136.7 172 44.8
CSS0010000 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 1.1e-29 136.0 99 76.8
CSS0024456 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 1.1e-29 136.0 99 76.8
Actinidia27729 Actinidia chinensis HOM05D005536 ORTHO05D006999 7.4e-29 133.3 196 41.8
MD08G1236300 Malus domestica HOM05D005536 ORTHO05D006999 2.1e-28 131.7 131 61.1
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 6.9e-27 126.7 180 42.2
Cpa.g.sc31.103 Carica papaya HOM05D005536 ORTHO05D006999 7.1e-24 116.7 120 52.5
Actinidia02848 Actinidia chinensis HOM05D005536 ORTHO05D006999 4.1e-19 100.9 78 69.2
Actinidia02850 Actinidia chinensis HOM05D005536 ORTHO05D006999 2.6e-18 98.2 138 42.0
ECA236G5131 Erigeron canadensis HOM05D005536 ORTHO05D006999 6.5e-17 93.6 62 69.4
Haze_27076 Corylus avellana HOM05D005536 ORTHO05D006999 4.2e-16 90.9 144 36.8
Cpa.g.sc31.102 Carica papaya HOM05D005536 ORTHO05D006999 1.5e-10 72.4 50 74.0
Actinidia27731 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.1e-08 66.2 99 47.5
Medtr2g006225 Medicago truncatula HOM05D005536 ORTHO05D266164 7.9e-07 60.1 74 43.2


User provided reference genes

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