Gene: FAN18G3948
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN18G3948
- Transcript Identifier FAN18G3948.1
- Gene Type Coding gene
- Location Fvb5-1 : 21478439-21484292 : negative
Gene Family Information
- ID HOM05D005536
- #Genes/#Species 139/97
- Phylogenetic origin
- ID ORTHO05D006999
- #Genes/#Species 135/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id snap_masked-Fvb5-1-processed-gene-214.44.v1.0.a1
- pacid 50496060
Descriptions
- Description 2.5.1.3//2.7.1.49 - Thiamine-phosphate diphosphorylase / TMP pyrophosphorylase // Hydroxymethylpyrimidine kinase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009228 | IEA | InterPro | thiamine biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008972 | IEA | InterPro | phosphomethylpyrimidine kinase activity | |
| GO:0004789 | IEA | InterPro | thiamine-phosphate diphosphorylase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0008902 | ISO | PLAZA Integrative Orthology | hydroxymethylpyrimidine kinase activity | AT1G22940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G22940 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G22940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR022998 | Thiamine phosphate synthase/TenI |
| IPR045029 | Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase |
| IPR034291 | Thiamine phosphate synthase |
| IPR013749 | Pyridoxamine kinase/Phosphomethylpyrimidine kinase |
| IPR036206 | Thiamin phosphate synthase superfamily |
| IPR013785 | Aldolase-type TIM barrel |
| IPR004399 | Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain |
| IPR029056 | Ribokinase-like |
| Mapman id | Description |
|---|---|
| 7.2.1.2 | Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.bifunctional hydroxymethylpyrimidine kinase and thiamine-phosphate diphosphorylase (Th1) |