Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 6.7e-202 708.0 648 100.0
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 1.6e-115 421.0 656 79.0
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.5e-111 407.1 648 75.9
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 2.5e-95 354.0 676 69.1
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 4.2e-95 353.2 564 79.3
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.6e-94 351.3 708 67.5
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 2.7e-94 350.5 679 70.1
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 3.6e-94 350.1 680 70.0
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 8.0e-94 349.0 664 71.1
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 3.9e-93 346.7 642 72.6
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 5.2e-93 346.3 677 69.3
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 8.8e-93 345.5 680 69.7
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 5.7e-92 342.8 632 76.6
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.7e-91 340.1 722 53.6
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 1.4e-90 338.2 645 71.3
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 4.5e-89 333.2 660 69.5
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 5.9e-89 332.8 655 70.5
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 1.5e-87 328.2 587 75.1
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 3.2e-87 327.0 649 70.3
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 7.2e-87 325.9 663 69.1
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.2e-86 325.1 571 76.4
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 1.6e-86 324.7 661 69.0
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 2.7e-86 323.9 657 68.6
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.0e-85 322.0 555 76.4
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 1.4e-85 321.6 610 73.1
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 4.0e-85 320.1 659 69.3
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 5.2e-85 319.7 632 70.7
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 5.2e-85 319.7 667 68.7
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.5e-84 318.2 630 71.3
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 2.6e-84 317.4 552 77.9
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 3.3e-84 317.0 661 70.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 9.7e-84 315.5 662 69.0
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.7e-83 314.7 614 71.3
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 2.2e-83 314.3 606 72.8
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.2e-83 314.3 675 68.6
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 2.8e-83 313.9 661 69.0
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.8e-83 313.9 664 68.2
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 8.2e-83 312.4 665 68.4
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.1e-82 312.0 627 70.5
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 7.0e-82 309.3 648 68.8
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.6e-81 308.1 574 65.9
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.0e-81 307.8 601 73.2
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 2.7e-81 307.4 662 68.0
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 5.9e-81 306.2 649 68.9
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.0e-80 305.4 665 67.5
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 1.3e-80 305.1 708 45.9
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.7e-80 304.7 607 71.2
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 2.2e-80 304.3 644 68.3
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 5.0e-80 303.1 589 72.7
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 8.5e-80 302.4 552 75.7
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.5e-79 301.6 552 75.7
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.5e-79 301.6 605 72.9
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.9e-79 301.2 553 75.4
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.9e-79 301.2 553 75.4
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.9e-79 301.2 646 68.9
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 3.2e-79 300.4 552 75.5
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 5.5e-79 299.7 610 70.3
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 1.2e-78 298.5 587 72.2
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.2e-78 298.5 522 80.1
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 1.6e-78 298.1 535 77.4
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.7e-78 297.4 522 79.9
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 6.1e-78 296.2 645 68.4
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 8.0e-78 295.8 644 67.7
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 8.0e-78 295.8 647 66.9
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.0e-77 295.4 638 69.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 1.4e-77 295.0 646 68.4
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 1.4e-77 295.0 652 66.9
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.4e-77 295.0 608 70.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.4e-77 295.0 270 68.5
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.4e-77 295.0 661 67.6
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 2.3e-77 294.3 550 75.3
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 3.0e-77 293.9 611 68.6
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 5.2e-77 293.1 644 67.4
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 6.8e-77 292.7 191 92.7
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.7e-76 289.7 638 68.2
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 9.8e-76 288.9 653 66.8
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 1.3e-75 288.5 646 67.5
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 2.8e-75 287.3 598 70.6
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 3.7e-75 287.0 653 66.5
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.1e-74 285.4 641 67.9
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 2.4e-74 284.3 549 40.4
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 3.1e-74 283.9 548 75.7
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 4.1e-74 283.5 529 76.2
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 9.1e-74 282.3 646 67.3
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 1.2e-73 282.0 532 75.6
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.0e-73 281.2 638 67.9
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.0e-72 278.9 616 69.5
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.5e-71 275.0 682 63.8
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 4.7e-70 270.0 653 66.0
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 1.8e-69 268.1 601 58.2
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.2e-67 261.2 534 74.3
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 5.4e-66 256.5 525 73.9
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.0e-65 254.6 231 61.9
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 3.8e-64 250.4 653 60.3
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 3.6e-62 243.8 267 52.1
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.7e-59 235.0 685 56.9
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 6.2e-54 216.5 263 51.0
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 2.6e-52 211.1 279 47.7
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 1.1e-47 195.7 518 69.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 2.3e-45 188.0 143 59.4
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 1.4e-37 162.2 123 65.0
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.2e-36 159.1 176 65.3
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 7.1e-34 149.8 110 63.6
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.6e-33 148.7 211 42.7
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.5e-31 142.1 120 55.0
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 6.2e-30 136.7 110 60.0
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 9.0e-29 132.9 161 42.9
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 6.4e-27 126.7 194 43.8
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.2e-26 124.0 80 75.0
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.5e-25 120.9 112 57.1
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.6e-25 120.6 80 72.5
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 4.2e-18 97.4 123 39.8
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 5.1e-16 90.5 113 53.1
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.5e-15 89.0 199 38.7
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 1.3e-14 85.9 119 42.9
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.5e-12 79.0 75 89.3
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 1.9e-10 72.0 112 32.1


User provided reference genes

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