Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 0.0e+00 1189.5 604 100.0
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 2.6e-91 340.5 595 35.1
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 7.9e-88 328.9 601 34.8
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 2.0e-86 324.3 601 34.8
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.7e-85 321.2 604 36.8
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 7.7e-83 312.4 595 34.5
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 1.4e-81 308.1 596 37.8
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.6e-80 304.7 612 35.6
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 4.7e-80 303.1 600 34.8
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.0e-79 302.0 599 35.4
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 2.3e-79 300.8 590 33.1
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 3.9e-79 300.1 595 35.6
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 3.9e-79 300.1 587 33.2
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 5.2e-79 299.7 594 35.2
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 5.2e-79 299.7 592 34.8
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 2.0e-78 297.7 592 33.8
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.3e-77 295.0 575 35.3
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 1.3e-77 295.0 580 33.6
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.3e-77 292.7 597 34.8
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 8.2e-77 292.4 595 35.1
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.8e-76 291.2 593 33.1
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.8e-76 291.2 594 33.0
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 4.1e-76 290.0 593 33.1
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 9.1e-76 288.9 603 33.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.5e-75 287.0 600 35.3
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 4.5e-75 286.6 593 34.2
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 5.9e-75 286.2 595 32.8
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 7.7e-75 285.8 593 33.7
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.0e-74 285.4 596 32.9
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.0e-74 285.4 593 34.4
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.3e-74 285.0 584 33.9
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.3e-74 285.0 594 34.0
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 2.9e-74 283.9 585 35.2
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.1e-73 282.0 600 34.8
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.5e-73 281.6 597 33.8
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.5e-73 281.6 597 32.5
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.9e-73 281.2 599 33.6
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.5e-73 280.8 597 33.8
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.2e-73 280.4 563 32.5
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 5.5e-73 279.6 400 40.8
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.5e-73 279.6 569 36.4
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 7.2e-73 279.3 592 34.1
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.2e-72 278.5 568 33.3
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 2.1e-72 277.7 594 33.2
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 2.7e-72 277.3 593 32.0
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 2.7e-72 277.3 602 31.7
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 3.6e-72 276.9 593 33.4
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 6.1e-72 276.2 576 34.2
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 8.0e-72 275.8 598 32.8
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.4e-71 275.0 572 33.7
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 6.8e-71 272.7 596 33.2
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 8.8e-71 272.3 573 34.0
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 1.5e-70 271.6 599 34.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.5e-70 271.6 609 31.9
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 1.5e-70 271.6 532 34.4
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 3.4e-70 270.4 608 31.7
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 4.4e-70 270.0 609 30.9
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.3e-69 268.5 600 33.2
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.8e-69 267.3 611 31.4
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 4.8e-69 266.5 593 32.7
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.1e-68 265.4 594 31.3
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 2.4e-68 264.2 594 32.2
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.3e-68 263.1 564 33.3
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 7.0e-68 262.7 584 32.7
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 9.1e-68 262.3 593 31.7
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 9.1e-68 262.3 587 31.5
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 3.5e-67 260.4 595 31.9
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 7.7e-67 259.2 595 31.1
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.9e-66 257.3 596 31.9
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.5e-65 255.0 595 31.4
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.9e-65 254.6 594 31.1
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 4.2e-65 253.4 595 30.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 2.1e-64 251.1 602 31.2
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 4.7e-64 250.0 586 31.2
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 4.7e-64 250.0 594 32.8
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 4.0e-63 246.9 734 27.8
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 5.2e-63 246.5 581 31.3
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.2e-62 245.4 537 32.6
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 2.0e-62 244.6 594 31.6
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 9.8e-62 242.3 538 32.3
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 1.3e-61 241.9 614 31.1
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 8.3e-61 239.2 671 29.1
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.4e-60 238.4 597 31.3
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.8e-60 238.0 615 31.2
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 2.7e-59 234.2 595 30.1
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 4.5e-59 233.4 527 32.3
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 7.7e-59 232.6 611 30.6
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.7e-58 231.5 596 32.0
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 8.6e-58 229.2 631 30.7
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-57 228.8 617 30.8
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 8.0e-56 222.6 343 39.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 4.5e-51 206.8 343 35.3
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 4.7e-48 196.8 335 36.1
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.6e-46 191.0 467 31.9
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.2e-43 182.2 444 32.0
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.6e-43 180.3 454 31.5
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.6e-40 171.8 192 41.7
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.3e-39 167.9 448 30.8
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 2.2e-37 161.4 422 29.6
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 4.9e-37 160.2 210 39.0
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 4.1e-36 157.1 520 29.0
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 8.6e-34 149.4 442 29.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 1.6e-32 145.2 165 39.4
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.8e-30 136.7 215 37.2
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 3.2e-28 131.0 589 26.7
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 6.2e-24 116.7 148 40.5
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.4e-23 115.5 370 32.4
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.1e-23 114.4 127 44.1
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.0e-22 111.7 138 41.3
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 3.8e-21 107.5 184 33.2
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.2e-20 104.4 119 46.2
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 8.7e-18 96.3 88 55.7
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.1e-16 91.7 80 56.2
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.4e-12 79.0 153 34.6
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.9e-12 78.6 303 30.4
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 1.9e-12 78.6 121 36.4
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.4e-07 62.4 61 49.2
MCO11G052 Micromonas commoda HOM05D006560 ORTHO05D008164 3.4e-06 57.8 155 28.4


User provided reference genes

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