Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36284 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 8.5e-82 307.4 207 100.0
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 2.1e-24 116.7 57 98.2
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 1.8e-15 87.0 61 68.9
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.8e-15 87.0 61 68.9
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.8e-15 87.0 61 68.9
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 2.4e-15 86.7 63 66.7
Mapoly0080s0050 Marchantia polymorpha HOM05D001724 ORTHO05D007284 2.4e-15 86.7 74 59.5
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 4.0e-15 85.9 61 67.2
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 5.2e-15 85.5 61 67.2
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 5.2e-15 85.5 61 67.2
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 6.8e-15 85.1 61 67.2
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 6.8e-15 85.1 61 65.6
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 8.9e-15 84.7 61 67.2
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 1.2e-14 84.3 61 65.6
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 1.2e-14 84.3 61 67.2
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 1.2e-14 84.3 61 65.6
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 1.2e-14 84.3 61 63.9
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 1.5e-14 84.0 61 65.6
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 1.5e-14 84.0 61 65.6
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 2.0e-14 83.6 61 65.6
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 62.3
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 65.6
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 65.6
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 65.6
Potri.001G368500 Populus trichocarpa HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 67.2
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 68.9
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 2.6e-14 83.2 61 65.6
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 62.3
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 63.9
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 62.3
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 62.3
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 65.6
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 65.6
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 63.9
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 65.6
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 65.6
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 67.2
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 3.4e-14 82.8 74 54.1
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 67.2
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 3.4e-14 82.8 61 65.6
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 4.4e-14 82.4 61 65.6
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 4.4e-14 82.4 61 63.9
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 4.4e-14 82.4 61 62.3
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 4.4e-14 82.4 61 67.2
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 5.8e-14 82.0 61 62.3
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 5.8e-14 82.0 61 62.3
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 5.8e-14 82.0 61 62.3
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 5.8e-14 82.0 61 62.3
HPP92_018204 Vanilla planifolia HOM05D001724 ORTHO05D007284 5.8e-14 82.0 61 62.3
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis HOM05D001724 ORTHO05D007284 7.6e-14 81.6 62 64.5
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 7.6e-14 81.6 61 62.3
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 7.6e-14 81.6 61 62.3
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 7.6e-14 81.6 61 60.7
arahy.Tifrunner.gnm1.ann1.AFR4D1 Arachis hypogaea HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 67.2
arahy.Tifrunner.gnm1.ann1.HGG2PG Arachis hypogaea HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 67.2
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 63.9
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 67.2
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 67.2
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 67.2
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 63.9
Sc03g0011450 Simmondsia chinensis HOM05D001724 ORTHO05D007284 9.9e-14 81.3 61 60.7
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 1.3e-13 80.9 61 65.6
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 1.3e-13 80.9 61 67.2
Nitab4.5_0010137g0010 Nicotiana tabacum HOM05D001724 ORTHO05D007284 1.3e-13 80.9 76 55.3
Sc03g0011370 Simmondsia chinensis HOM05D001724 ORTHO05D007284 1.3e-13 80.9 60 61.7
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 1.3e-13 80.9 61 62.3
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 1.7e-13 80.5 61 62.3
unitig_746.g26709 Utricularia gibba HOM05D001724 ORTHO05D007284 1.7e-13 80.5 61 63.9
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 62.3
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 2.2e-13 80.1 61 60.7
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 2.9e-13 79.7 61 62.3
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 2.9e-13 79.7 61 65.6
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 2.9e-13 79.7 61 65.6
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 3.8e-13 79.3 61 62.3
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 3.8e-13 79.3 61 62.3
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 4.9e-13 79.0 61 60.7
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 6.4e-13 78.6 61 62.3
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 6.4e-13 78.6 61 62.3
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 6.4e-13 78.6 61 62.3
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 6.4e-13 78.6 61 62.3
CAN.G325.2 Capsicum annuum HOM05D001724 ORTHO05D007284 8.4e-13 78.2 60 60.0
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 8.4e-13 78.2 61 60.7
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 1.1e-12 77.8 61 60.7
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 1.1e-12 77.8 61 62.3
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 1.1e-12 77.8 61 59.0
Os09g0477900 Oryza sativa ssp. japonica HOM05D001724 ORTHO05D007284 1.4e-12 77.4 61 62.3
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 1.9e-12 77.0 61 59.0
Zm00001eb101440 Zea mays HOM05D001724 ORTHO05D007284 1.9e-12 77.0 61 62.3
CDE02G1840 Ceratophyllum demersum HOM05D001724 ORTHO05D007284 5.4e-12 75.5 60 60.0
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 2.7e-11 73.2 67 58.2
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 3.5e-11 72.8 62 51.6
FvH4_3g43140 Fragaria vesca HOM05D001724 ORTHO05D007284 1.0e-10 71.2 89 44.9
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.1e-09 67.8 89 39.3


User provided reference genes

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