Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35711 Sequoiadendron giganteum HOM05D001266 ORTHO05D001105 1.5e-65 252.7 126 100.0
SEGI_09322 Sequoiadendron giganteum HOM05D001266 ORTHO05D001105 6.4e-24 114.4 76 77.6
SEGI_21554 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 9.9e-17 90.5 53 79.2
SEGI_09049 Sequoiadendron giganteum HOM05D001266 ORTHO05D001105 3.5e-14 82.0 75 61.3
SEGI_18277 Sequoiadendron giganteum HOM05D002483 ORTHO05D012017 1.5e-12 76.6 206 35.0
Lj1g0010181 Lotus japonicus HOM05D001266 ORTHO05D001105 6.9e-10 67.8 73 54.8
Migut.H00209 Erythranthe guttata HOM05D001266 ORTHO05D001105 9.0e-10 67.4 74 55.4
Oeu050370.2 Olea europaea HOM05D001266 ORTHO05D001105 9.0e-10 67.4 72 52.8
Dinv21100 Davidia involucrata HOM05D001266 ORTHO05D001105 2.0e-09 66.2 75 56.0
Lj3A1017G47 Lonicera japonica HOM05D001266 ORTHO05D001105 2.6e-09 65.9 75 56.0
Potri.017G114000 Populus trichocarpa HOM05D001266 ORTHO05D001105 3.4e-09 65.5 73 54.8
ECA232G3592 Erigeron canadensis HOM05D001266 ORTHO05D001105 5.8e-09 64.7 74 48.6
Hma1.2p1_0061F.1_g034090 Hydrangea macrophylla HOM05D001266 ORTHO05D001105 5.8e-09 64.7 78 52.6
Migut.L00311 Erythranthe guttata HOM05D001266 ORTHO05D001105 7.6e-09 64.3 74 52.7
THA.LOC104820952 Tarenaya hassleriana HOM05D001266 ORTHO05D001105 7.6e-09 64.3 73 49.3
AL7G52100 Arabidopsis lyrata HOM05D001266 ORTHO05D001105 1.3e-08 63.5 75 52.0
Potri.010G126200 Populus trichocarpa HOM05D001266 ORTHO05D001105 1.7e-08 63.2 75 52.0
Lj2C443G8 Lonicera japonica HOM05D001266 ORTHO05D001105 2.9e-08 62.4 74 52.7
Lsat_1_v5_gn_4_84860 Lactuca sativa HOM05D001266 ORTHO05D001105 3.8e-08 62.0 73 50.7
Nn3g17814 Nelumbo nucifera HOM05D001266 ORTHO05D001105 3.8e-08 62.0 73 45.2
Nitab4.5_0000280g0260 Nicotiana tabacum HOM05D001266 ORTHO05D001105 3.8e-08 62.0 76 47.4
Peaxi162Scf00501g00129 Petunia axillaris HOM05D001266 ORTHO05D001105 3.8e-08 62.0 73 46.6
THA.LOC104803002 Tarenaya hassleriana HOM05D001266 ORTHO05D001105 3.8e-08 62.0 73 46.6
arahy.Tifrunner.gnm1.ann1.PSQ86Q Arachis hypogaea HOM05D001266 ORTHO05D001105 4.9e-08 61.6 73 53.4
arahy.Tifrunner.gnm1.ann1.TCIE48 Arachis hypogaea HOM05D001266 ORTHO05D001105 4.9e-08 61.6 73 53.4
CiPaw.03G060800 Carya illinoinensis HOM05D001266 ORTHO05D001105 4.9e-08 61.6 73 50.7
Nn4g23813 Nelumbo nucifera HOM05D001266 ORTHO05D001105 4.9e-08 61.6 73 47.9
Hund16138 Selenicereus undatus HOM05D001266 ORTHO05D001105 4.9e-08 61.6 75 50.7
Solyc04g007120.4 Solanum lycopersicum HOM05D001266 ORTHO05D001105 4.9e-08 61.6 76 48.7
Sopen04g002210 Solanum pennellii HOM05D001266 ORTHO05D001105 4.9e-08 61.6 76 48.7
Manes.02G067800 Manihot esculenta HOM05D001266 ORTHO05D001105 6.4e-08 61.2 73 52.1
Solyc03g117780.2 Solanum lycopersicum HOM05D001266 ORTHO05D001105 6.4e-08 61.2 73 52.1
TPR.G9716 Trifolium pratense HOM05D001266 ORTHO05D001105 6.4e-08 61.2 73 47.9
ATR0171G001 Amborella trichopoda HOM05D001266 ORTHO05D001105 8.4e-08 60.8 73 47.9
BcaC09g47707 Brassica carinata HOM05D001266 ORTHO05D001105 8.4e-08 60.8 73 49.3
Hma1.2p1_0136F.1_g062210 Hydrangea macrophylla HOM05D001266 ORTHO05D001105 8.4e-08 60.8 75 50.7
Lj6A760T49 Lonicera japonica HOM05D001266 ORTHO05D001105 8.4e-08 60.8 77 48.1
Nitab4.5_0003189g0010 Nicotiana tabacum HOM05D001266 ORTHO05D001105 8.4e-08 60.8 76 46.1
CSS0032032 Camellia sinensis var. sinensis HOM05D001266 ORTHO05D001105 1.1e-07 60.5 73 54.8
Duzib268G1583 Durio zibethinus HOM05D001266 ORTHO05D001105 1.1e-07 60.5 75 50.7
Medtr7g407040 Medicago truncatula HOM05D001266 ORTHO05D001105 1.1e-07 60.5 73 49.3
Potri.008G119700 Populus trichocarpa HOM05D001266 ORTHO05D001105 1.1e-07 60.5 75 50.7
Thecc.02G356500 Theobroma cacao HOM05D001266 ORTHO05D001105 1.1e-07 60.5 76 48.7
vmacro05562 Vaccinium macrocarpon HOM05D001266 ORTHO05D001105 1.1e-07 60.5 73 50.7
DCAR_026729 Daucus carota HOM05D001266 ORTHO05D001105 1.4e-07 60.1 74 51.4
Mapoly0002s0249 Marchantia polymorpha HOM05D001266 ORTHO05D001105 1.4e-07 60.1 78 47.4
Peaxi162Scf00086g00916 Petunia axillaris HOM05D001266 ORTHO05D001105 1.4e-07 60.1 76 46.1
Ah.16g101860 Amaranthus hybridus HOM05D001266 ORTHO05D001105 1.9e-07 59.7 79 45.6
ECA234G1519 Erigeron canadensis HOM05D001266 ORTHO05D001105 1.9e-07 59.7 82 47.6
Lalb_Chr17g0342101 Lupinus albus HOM05D001266 ORTHO05D001105 1.9e-07 59.7 74 51.4
Aqoxy3G00319 Aquilegia oxysepala HOM05D001266 ORTHO05D001105 2.4e-07 59.3 74 51.4
Gohir.A13G054700 Gossypium hirsutum HOM05D001266 ORTHO05D001105 2.4e-07 59.3 75 48.0
Psat3g205600 Pisum sativum HOM05D001266 ORTHO05D001105 2.4e-07 59.3 73 47.9
Sopen03g036690 Solanum pennellii HOM05D001266 ORTHO05D001105 2.4e-07 59.3 73 52.1
Actinidia26299 Actinidia chinensis HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 49.3
AT5G38470 Arabidopsis thaliana HOM05D001266 ORTHO05D001105 3.2e-07 58.9 76 48.7
CSS0037316 Camellia sinensis var. sinensis HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 49.3
CAN.G953.9 Capsicum annuum HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 47.9
Cc07_g08860 Coffea canephora HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 52.1
Thhalv10020817m.g Eutrema salsugineum HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 49.3
Nitab4.5_0005437g0030 Nicotiana tabacum HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 52.1
Pp3c10_8490 Physcomitrium patens HOM05D001266 ORTHO05D001105 3.2e-07 58.9 73 49.3
Sabra10G0095900 Salix brachista HOM05D001266 ORTHO05D001105 3.2e-07 58.9 75 49.3
vmacro01376 Vaccinium macrocarpon HOM05D001266 ORTHO05D001105 3.2e-07 58.9 75 49.3
HanXRQChr16g0499511 Helianthus annuus HOM05D001266 ORTHO05D001105 4.2e-07 58.5 73 45.2
Sc11g0008270 Simmondsia chinensis HOM05D001266 ORTHO05D001105 4.2e-07 58.5 74 47.3
BcaC01g04440 Brassica carinata HOM05D001266 ORTHO05D001105 5.5e-07 58.2 73 47.9
C03p40140 Brassica napus HOM05D001266 ORTHO05D001105 5.5e-07 58.2 73 47.9
BolC3t16280H Brassica oleracea HOM05D001266 ORTHO05D001105 5.5e-07 58.2 73 47.9
CAN.G25.6 Capsicum annuum HOM05D001266 ORTHO05D001105 5.5e-07 58.2 76 44.7
CARHR291840 Cardamine hirsuta HOM05D001266 ORTHO05D001105 5.5e-07 58.2 77 48.1
Ciclev10011886m.g Citrus clementina HOM05D001266 ORTHO05D001105 5.5e-07 58.2 74 48.6
Manes.01G109600 Manihot esculenta HOM05D001266 ORTHO05D001105 5.5e-07 58.2 73 49.3
A03p33000 Brassica napus HOM05D001266 ORTHO05D001105 7.1e-07 57.8 73 47.9
CiPaw.04G041200 Carya illinoinensis HOM05D001266 ORTHO05D001105 7.1e-07 57.8 73 49.3
CiPaw.04G041600 Carya illinoinensis HOM05D001266 ORTHO05D001105 7.1e-07 57.8 73 49.3
Ca_04067_v3 Cicer arietinum L. HOM05D001266 ORTHO05D001105 7.1e-07 57.8 73 46.6
Sabra01G0026600 Salix brachista HOM05D001266 ORTHO05D001105 7.1e-07 57.8 75 49.3
TPR.G26274 Trifolium pratense HOM05D001266 ORTHO05D001105 7.1e-07 57.8 76 47.4
HPP92_013218 Vanilla planifolia HOM05D001266 ORTHO05D001105 7.1e-07 57.8 76 44.7
HPP92_013260 Vanilla planifolia HOM05D001266 ORTHO05D001105 7.1e-07 57.8 76 44.7
Sed0024821 Sechium edule HOM05D001266 ORTHO05D001105 9.3e-07 57.4 78 48.7
BraA03t12468Z Brassica rapa HOM05D001266 ORTHO05D001105 1.2e-06 57.0 73 47.9
Cfa018605 Carpinus fangiana HOM05D001266 ORTHO05D001105 1.2e-06 57.0 82 47.6
Haze_17469 Corylus avellana HOM05D001266 ORTHO05D001105 1.2e-06 57.0 82 47.6
Nitab4.5_0002540g0100 Nicotiana tabacum HOM05D001266 ORTHO05D001105 1.2e-06 57.0 73 49.3
Hund25077 Selenicereus undatus HOM05D001266 ORTHO05D001105 1.2e-06 57.0 77 49.4
SGA_v2.0_scaffold14G06852 Striga asiatica HOM05D001266 ORTHO05D001105 1.2e-06 57.0 75 52.0
TAR622G0705 Trochodendron aralioides HOM05D001266 ORTHO05D001105 1.2e-06 57.0 73 47.9
ATR0580G066 Amborella trichopoda HOM05D001266 ORTHO05D001105 1.6e-06 56.6 73 49.3
Glyma.10G275100 Glycine max HOM05D001266 ORTHO05D001105 1.6e-06 56.6 77 50.6
Gohir.A13G054500 Gossypium hirsutum HOM05D001266 ORTHO05D001105 1.6e-06 56.6 123 36.6
Lalb_Chr10g0091191 Lupinus albus HOM05D001266 ORTHO05D001105 1.6e-06 56.6 71 50.7
Nn3g17285 Nelumbo nucifera HOM05D001266 ORTHO05D001105 1.6e-06 56.6 73 49.3
Nitab4.5_0004781g0010 Nicotiana tabacum HOM05D001266 ORTHO05D001105 1.6e-06 56.6 79 46.8
Potri.001G038000 Populus trichocarpa HOM05D001266 ORTHO05D001105 1.6e-06 56.6 75 48.0
THA.LOC104822643 Tarenaya hassleriana HOM05D001266 ORTHO05D001105 1.6e-06 56.6 75 46.7
CANSAT64G1121 Cannabis sativa HOM05D001266 ORTHO05D001105 2.1e-06 56.2 76 47.4
DCAR_023665 Daucus carota HOM05D001266 ORTHO05D001105 2.1e-06 56.2 75 46.7
MD17G1076200 Malus domestica HOM05D001266 ORTHO05D001105 2.1e-06 56.2 75 46.7
GSVIVG01031048001 Vitis vinifera HOM05D001266 ORTHO05D001105 2.1e-06 56.2 75 49.3
MSTRG.13520 Avicennia marina HOM05D001266 ORTHO05D001105 2.7e-06 55.8 75 46.7
DCAR_017203 Daucus carota HOM05D001266 ORTHO05D001105 2.7e-06 55.8 73 49.3
Duzib235G1178 Durio zibethinus HOM05D001266 ORTHO05D001105 2.7e-06 55.8 73 47.9
Gohir.D13G067200 Gossypium hirsutum HOM05D001266 ORTHO05D001105 2.7e-06 55.8 75 46.7
Gohir.D13G067300 Gossypium hirsutum HOM05D001266 ORTHO05D001105 2.7e-06 55.8 75 46.7
Nn8g40143 Nelumbo nucifera HOM05D001266 ORTHO05D001105 2.7e-06 55.8 74 51.4
Nitab4.5_0004194g0050 Nicotiana tabacum HOM05D001266 ORTHO05D001105 2.7e-06 55.8 73 49.3
PSO478G1116 Papaver somniferum HOM05D001266 ORTHO05D001105 2.7e-06 55.8 75 49.3
Gohir.A13G054400 Gossypium hirsutum HOM05D001266 ORTHO05D001105 3.5e-06 55.5 75 46.7
Gohir.D13G067400 Gossypium hirsutum HOM05D001266 ORTHO05D001105 3.5e-06 55.5 75 46.7
Gohir.D13G067500 Gossypium hirsutum HOM05D001266 ORTHO05D001105 3.5e-06 55.5 75 46.7
Gorai.013G076800 Gossypium raimondii HOM05D001266 ORTHO05D001105 3.5e-06 55.5 75 46.7
PGSC0003DMG400024190 Solanum tuberosum HOM05D001266 ORTHO05D001105 3.5e-06 55.5 73 47.9
Thecc.06G133500 Theobroma cacao HOM05D001266 ORTHO05D001105 3.5e-06 55.5 73 47.9
MSTRG.9388 Avicennia marina HOM05D001266 ORTHO05D001105 4.6e-06 55.1 73 45.2
Gorai.013G076500 Gossypium raimondii HOM05D001266 ORTHO05D001105 4.6e-06 55.1 75 46.7
HanXRQChr09g0274271 Helianthus annuus HOM05D001266 ORTHO05D001105 4.6e-06 55.1 73 42.5
Lalb_Chr10g0099971 Lupinus albus HOM05D001266 ORTHO05D001105 4.6e-06 55.1 73 47.9
Pp3c21_210 Physcomitrium patens HOM05D001266 ORTHO05D001105 4.6e-06 55.1 79 44.3
Prupe.1G309600 Prunus persica HOM05D001266 ORTHO05D001105 4.6e-06 55.1 77 48.1
Actinidia38382 Actinidia chinensis HOM05D001266 ORTHO05D001105 6.0e-06 54.7 79 46.8
Ciclev10031777m.g Citrus clementina HOM05D001266 ORTHO05D001105 6.0e-06 54.7 75 46.7
Gorai.013G076600 Gossypium raimondii HOM05D001266 ORTHO05D001105 6.0e-06 54.7 75 45.3
Rhsim08G0201400 Rhododendron simsii HOM05D001266 ORTHO05D001105 6.0e-06 54.7 74 52.7
SGA_v2.0_scaffold5G02834 Striga asiatica HOM05D001266 ORTHO05D001105 6.0e-06 54.7 71 43.7
CAN.G1008.16 Capsicum annuum HOM05D001266 ORTHO05D001105 7.9e-06 54.3 73 49.3
Dinv23262 Davidia involucrata HOM05D001266 ORTHO05D001105 7.9e-06 54.3 73 43.8
Glyma.20G114700 Glycine max HOM05D001266 ORTHO05D001105 7.9e-06 54.3 77 49.4
Lalb_Chr06g0166151 Lupinus albus HOM05D001266 ORTHO05D001105 7.9e-06 54.3 78 43.6
Oeu033731.3 Olea europaea HOM05D001266 ORTHO05D001105 7.9e-06 54.3 76 43.4
Solyc02g063130.4 Solanum lycopersicum HOM05D001266 ORTHO05D001105 7.9e-06 54.3 73 47.9


User provided reference genes

Program Settings