Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32344 Sequoiadendron giganteum HOM05D018713 ORTHO05D004825 1.3e-191 672.9 361 100.0
SEGI_03682 Sequoiadendron giganteum HOM05D000143 ORTHO05D000072 2.1e-59 233.8 389 46.8
SEGI_35064 Sequoiadendron giganteum HOM05D018713 ORTHO05D000093 1.6e-51 207.6 209 58.4
SEGI_36116 Sequoiadendron giganteum HOM05D000835 ORTHO05D004825 2.1e-35 154.1 360 35.3
SEGI_28126 Sequoiadendron giganteum HOM05D002886 ORTHO05D000093 5.2e-34 149.4 353 35.7
SEGI_06440 Sequoiadendron giganteum HOM05D018713 ORTHO05D000093 5.9e-30 136.0 117 64.1
SEGI_11131 Sequoiadendron giganteum HOM05D018713 ORTHO05D000093 6.1e-27 125.9 70 84.3
SEGI_29204 Sequoiadendron giganteum HOM05D000835 ORTHO05D004825 5.2e-18 96.3 52 90.4
SEGI_15935 Sequoiadendron giganteum HOM05D059367 ORTHO05D384589 4.4e-17 93.2 367 28.9
SEGI_08225 Sequoiadendron giganteum HOM05D000832 ORTHO05D015138 2.5e-12 77.4 64 67.2
SEGI_28270 Sequoiadendron giganteum HOM05D000278 ORTHO05D004673 1.6e-11 74.7 75 50.7
SEGI_15133 Sequoiadendron giganteum HOM05D000140 ORTHO05D000087 1.0e-10 72.0 55 70.9
SEGI_26194 Sequoiadendron giganteum HOM05D000426 ORTHO05D000979 2.3e-10 70.9 44 79.5
SEGI_07777 Sequoiadendron giganteum HOM05D022645 ORTHO05D018503 3.0e-10 70.5 46 73.9
SEGI_13256 Sequoiadendron giganteum HOM05D000835 ORTHO05D004825 6.8e-10 69.3 48 66.7
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 8.8e-10 68.9 44 79.5
SEGI_40149 Sequoiadendron giganteum HOM05D000835 ORTHO05D004825 3.4e-09 67.0 37 83.8
SEGI_03740 Sequoiadendron giganteum HOM05D018713 ORTHO05D000093 1.4e-07 61.6 71 52.1
Migut.J00851 Erythranthe guttata HOM05D000835 ORTHO05D004825 4.1e-07 60.1 43 72.1
SalBow3G2439 Salvia bowleyana HOM05D000835 ORTHO05D004825 4.1e-07 60.1 43 72.1
Pp3c27_6340 Physcomitrium patens HOM05D000835 ORTHO05D004825 5.4e-07 59.7 43 67.4
AL1G16200 Arabidopsis lyrata HOM05D000835 ORTHO05D004825 7.0e-07 59.3 34 79.4
SEGI_02019 Sequoiadendron giganteum HOM05D000140 ORTHO05D000087 7.0e-07 59.3 62 50.0
SGA_v2.0_scaffold14G07042 Striga asiatica HOM05D000835 ORTHO05D004825 7.0e-07 59.3 34 79.4
HPP92_020496 Vanilla planifolia HOM05D000835 ORTHO05D004825 7.0e-07 59.3 39 76.9
HPP92_020500 Vanilla planifolia HOM05D000835 ORTHO05D004825 7.0e-07 59.3 39 76.9
FvH4_7g03790 Fragaria vesca HOM05D000835 ORTHO05D004825 9.2e-07 58.9 34 79.4
FAN01G0835 Fragaria x ananassa HOM05D000835 ORTHO05D004825 9.2e-07 58.9 34 79.4
FAN03G3509 Fragaria x ananassa HOM05D000835 ORTHO05D004825 9.2e-07 58.9 34 79.4
FAN06G2977 Fragaria x ananassa HOM05D000835 ORTHO05D004825 9.2e-07 58.9 34 79.4
FAN10G2975 Fragaria x ananassa HOM05D000835 ORTHO05D004825 9.2e-07 58.9 34 79.4
Cc05_g02310 Coffea canephora HOM05D000835 ORTHO05D004825 1.2e-06 58.5 42 69.0
Lsat_1_v5_gn_5_94361 Lactuca sativa HOM05D000835 ORTHO05D004825 1.2e-06 58.5 33 81.8
MD02G1013600 Malus domestica HOM05D000835 ORTHO05D004825 1.2e-06 58.5 34 76.5
Mapoly0008s0107 Marchantia polymorpha HOM05D000835 ORTHO05D004825 1.2e-06 58.5 39 69.2
PSO017G2591 Papaver somniferum HOM05D000835 ORTHO05D004825 1.2e-06 58.5 33 81.8
PSO063G0608 Papaver somniferum HOM05D000835 ORTHO05D004825 1.2e-06 58.5 33 81.8
RcHm_v2.0_Chr1g0327101 Rosa chinensis HOM05D000835 ORTHO05D004825 1.2e-06 58.5 34 76.5
RcHm_v2.0_Chr2g0127751 Rosa chinensis HOM05D000835 ORTHO05D004825 1.2e-06 58.5 34 76.5
SMO116G0243 Selaginella moellendorffii HOM05D000835 ORTHO05D004825 1.2e-06 58.5 44 65.9
ATR0620G065 Amborella trichopoda HOM05D000835 ORTHO05D004825 1.6e-06 58.2 32 78.1
CDE02G3706 Ceratophyllum demersum HOM05D000835 ORTHO05D004825 1.6e-06 58.2 43 69.8
Eucgr.C04091 Eucalyptus grandis HOM05D000835 ORTHO05D004825 1.6e-06 58.2 33 78.8
HanXRQChr10g0315351 Helianthus annuus HOM05D000835 ORTHO05D004825 1.6e-06 58.2 33 81.8
Medtr4g116430 Medicago truncatula HOM05D000835 ORTHO05D004825 1.6e-06 58.2 38 76.3
Psat4g032760 Pisum sativum HOM05D000835 ORTHO05D004825 1.6e-06 58.2 40 70.0
PGR102G0588 Punica granatum HOM05D000835 ORTHO05D004825 1.6e-06 58.2 33 78.8
MSTRG.21107 Avicennia marina HOM05D000835 ORTHO05D004825 2.0e-06 57.8 43 69.8
Peaxi162Scf00391g00213 Petunia axillaris HOM05D000835 ORTHO05D004825 2.0e-06 57.8 43 67.4
Pp3c6_29320 Physcomitrium patens HOM05D000835 ORTHO05D004825 2.0e-06 57.8 33 78.8
Atru.chr1.3223 Acer truncatum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Aqoxy2G03921 Aquilegia oxysepala HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
CANSAT01G0568 Cannabis sativa HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Cpa.g.sc7.82 Carica papaya HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Cfa020900 Carpinus fangiana HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
CiPaw.16G118100 Carya illinoinensis HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
ClCG02G017230 Citrullus lanatus HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Ciclev10007342m.g Citrus clementina HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
COL.COLO4_19855 Corchorus olitorius HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Haze_20239 Corylus avellana HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
MELO3C004440.2 Cucumis melo HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
CsaV3_2G003560 Cucumis sativus L. HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Duzib168G1623 Durio zibethinus HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gohir.A09G095700 Gossypium hirsutum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gohir.A13G222500 Gossypium hirsutum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gohir.D04G153601 Gossypium hirsutum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gohir.D09G095400 Gossypium hirsutum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gohir.D13G227300 Gossypium hirsutum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gorai.006G112100 Gossypium raimondii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gorai.012G140400 Gossypium raimondii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Gorai.013G257800 Gossypium raimondii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Hma1.2p1_0518F.1_g171155 Hydrangea macrophylla HOM05D000835 ORTHO05D004825 2.7e-06 57.4 47 61.7
MBI17_g08177_MAGBIO Magnolia biondii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Manes.14G137900 Manihot esculenta HOM05D000835 ORTHO05D004825 2.7e-06 57.4 62 50.0
MCO11G411 Micromonas commoda HOM05D000835 ORTHO05D004825 2.7e-06 57.4 70 41.4
Nitab4.5_0001021g0120 Nicotiana tabacum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 43 67.4
Nitab4.5_0001555g0120 Nicotiana tabacum HOM05D000835 ORTHO05D004825 2.7e-06 57.4 43 67.4
QL02p037156 Quercus lobata HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
QL02p091140 Quercus lobata HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Thecc.09G282500 Theobroma cacao HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
TWI34G0205 Tripterygium wilfordii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
TWI63G1100 Tripterygium wilfordii HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
TAR626G0627 Trochodendron aralioides HOM05D000835 ORTHO05D004825 2.7e-06 57.4 33 78.8
Actinidia31056 Actinidia chinensis HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 78.8
arahy.Tifrunner.gnm1.ann1.6LFK0V Arachis hypogaea HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 75.8
A06p43370 Brassica napus HOM05D000835 ORTHO05D004825 3.5e-06 57.0 111 36.9
BraA06t27223Z Brassica rapa HOM05D000835 ORTHO05D004825 3.5e-06 57.0 111 36.9
CSS0040726 Camellia sinensis var. sinensis HOM05D000835 ORTHO05D004825 3.5e-06 57.0 43 67.4
DCAR_014922 Daucus carota HOM05D000835 ORTHO05D004825 3.5e-06 57.0 44 65.9
Dinv37182 Davidia involucrata HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 78.8
Glyma.13G165400 Glycine max HOM05D000835 ORTHO05D004825 3.5e-06 57.0 34 73.5
Glyma.17G105700 Glycine max HOM05D000835 ORTHO05D004825 3.5e-06 57.0 34 73.5
MD15G1160400 Malus domestica HOM05D000835 ORTHO05D004825 3.5e-06 57.0 34 73.5
Phvul.003G174100 Phaseolus vulgaris HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 75.8
Prupe.3G036300 Prunus persica HOM05D000835 ORTHO05D004825 3.5e-06 57.0 34 73.5
Rhsim09G0132100 Rhododendron simsii HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 78.8
Hund26921 Selenicereus undatus HOM05D000835 ORTHO05D004825 3.5e-06 57.0 42 66.7
PGSC0003DMG400030733 Solanum tuberosum HOM05D000835 ORTHO05D004825 3.5e-06 57.0 43 65.1
vmacro10387 Vaccinium macrocarpon HOM05D000835 ORTHO05D004825 3.5e-06 57.0 33 78.8
AT1G06220 Arabidopsis thaliana HOM05D000835 ORTHO05D004825 4.5e-06 56.6 34 76.5
Carub.0006s3241 Capsella rubella HOM05D000835 ORTHO05D004825 4.5e-06 56.6 34 76.5
CAN.G518.24 Capsicum annuum HOM05D000835 ORTHO05D004825 4.5e-06 56.6 43 65.1
CARHR005750 Cardamine hirsuta HOM05D000835 ORTHO05D004825 4.5e-06 56.6 34 76.5
CDE02G4178 Ceratophyllum demersum HOM05D000835 ORTHO05D004825 4.5e-06 56.6 43 67.4
Thhalv10006688m.g Eutrema salsugineum HOM05D000835 ORTHO05D004825 4.5e-06 56.6 34 76.5
Lalb_Chr07g0179481 Lupinus albus HOM05D000835 ORTHO05D004825 4.5e-06 56.6 40 67.5
Lalb_Chr13g0301221 Lupinus albus HOM05D000835 ORTHO05D004825 4.5e-06 56.6 40 67.5
Sp1g05030 Schrenkiella parvula HOM05D000835 ORTHO05D004825 4.5e-06 56.6 34 76.5
Solyc07g007210.3 Solanum lycopersicum HOM05D000835 ORTHO05D004825 4.5e-06 56.6 43 65.1
Sopen07g003260 Solanum pennellii HOM05D000835 ORTHO05D004825 4.5e-06 56.6 43 65.1
Aa31LG9G5170 Aethionema arabicum HOM05D000835 ORTHO05D004825 5.9e-06 56.2 34 73.5
ECA234G0529 Erigeron canadensis HOM05D000835 ORTHO05D004825 5.9e-06 56.2 33 75.8
Sed0019814 Sechium edule HOM05D000835 ORTHO05D004825 5.9e-06 56.2 33 75.8
THA.LOC104815391 Tarenaya hassleriana HOM05D000835 ORTHO05D004825 5.9e-06 56.2 33 75.8
TPR.G15808 Trifolium pratense HOM05D000835 ORTHO05D004825 5.9e-06 56.2 40 67.5
unitig_747.g21982 Utricularia gibba HOM05D000835 ORTHO05D004825 5.9e-06 56.2 43 67.4
Ca_21619_v3 Cicer arietinum L. HOM05D000835 ORTHO05D004825 7.8e-06 55.8 40 65.0
Lj4g0000935 Lotus japonicus HOM05D000835 ORTHO05D004825 7.8e-06 55.8 111 34.2


User provided reference genes

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