Gene: FAN01G0835

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN01G0835
  • Transcript Identifier FAN01G0835.1
  • Gene Type Coding gene
  • Location Fvb7-4 : 17901948-17904832 : negative

Gene Family Information

  • ID HOM05D000835
  • #Genes/#Species 712/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb7-4-augustus-gene-179.11.v1.0.a1
  • pacid 50542768

Descriptions

  • Description PF00009//PF03144//PF16004 - Elongation factor Tu GTP binding domain (GTP_EFTU) // Elongation factor Tu domain 2 (GTP_EFTU_D2) // 116 kDa U5 small nuclear ribonucleoprotein component N-terminus (EFTUD2)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045694
ISO
PLAZA Integrative Orthologyregulation of embryo sac egg cell differentiation AT1G06220
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G06220
GO:0048437
ISO
PLAZA Integrative Orthologyfloral organ development AT1G06220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G06220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G25230
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G06220
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G06220
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G25230
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G06220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR000795 Translational (tr)-type GTP-binding domain
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR044121 Snu114, GTP-binding domain
IPR005225 Small GTP-binding protein domain
IPR031950 116kDa U5 small nuclear ribonucleoprotein component, N-terminal
IPR035647 EF-G domain III/V-like
Mapman id Description
16.2.1.4.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (SNU114/U5-116kDa)