Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 1.3e-249 865.9 428 100.0
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 1.3e-185 653.3 382 82.5
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 1.1e-184 650.2 382 83.5
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 1.1e-184 650.2 382 83.0
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.9e-184 649.4 382 81.7
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 2.5e-184 649.0 382 81.4
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 2.5e-184 649.0 382 81.9
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 4.2e-184 648.3 382 81.4
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 9.3e-184 647.1 382 81.4
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 9.3e-184 647.1 382 81.4
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 1.2e-183 646.7 382 82.2
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 2.1e-183 646.0 382 80.6
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 4.6e-183 644.8 382 81.4
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 7.9e-183 644.0 382 80.9
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 2.3e-182 642.5 382 80.4
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 2.3e-182 642.5 402 78.6
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 5.1e-182 641.3 393 79.1
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 6.7e-182 641.0 382 80.6
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 6.7e-182 641.0 382 80.6
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 8.7e-182 640.6 382 80.6
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 8.7e-182 640.6 383 81.7
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 1.5e-181 639.8 382 81.2
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 4.3e-181 638.3 382 80.9
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 4.3e-181 638.3 382 80.6
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 5.7e-181 637.9 382 79.8
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 9.7e-181 637.1 382 80.1
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 2.2e-180 636.0 382 80.1
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 4.8e-180 634.8 382 79.8
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 6.3e-180 634.4 382 79.6
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 1.1e-179 633.6 382 79.6
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 1.4e-179 633.3 382 80.9
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 1.4e-179 633.3 382 79.6
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 1.8e-179 632.9 382 80.6
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 2.4e-179 632.5 382 79.6
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 3.1e-179 632.1 382 79.3
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 3.1e-179 632.1 382 80.6
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 3.1e-179 632.1 382 80.6
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 4.1e-179 631.7 382 80.6
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 4.1e-179 631.7 382 79.6
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 5.3e-179 631.3 382 79.3
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 5.3e-179 631.3 382 80.1
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 5.3e-179 631.3 382 78.8
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 6.9e-179 630.9 382 80.1
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 9.0e-179 630.6 382 79.3
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 1.2e-178 630.2 389 79.2
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 1.2e-178 630.2 389 79.2
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 2.6e-178 629.0 382 79.1
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 3.4e-178 628.6 382 79.6
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 5.9e-178 627.9 372 81.5
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 7.7e-178 627.5 382 78.3
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 1.0e-177 627.1 382 79.6
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 1.3e-177 626.7 382 78.0
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 2.2e-177 625.9 372 81.5
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 2.2e-177 625.9 382 78.3
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 5.0e-177 624.8 382 79.1
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 5.0e-177 624.8 382 79.1
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 6.5e-177 624.4 382 79.1
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 8.5e-177 624.0 382 78.8
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 8.5e-177 624.0 415 75.2
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 1.9e-176 622.9 382 79.3
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 1.6e-175 619.8 382 77.5
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 4.6e-175 618.2 392 76.3
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 6.1e-175 617.8 387 78.0
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 6.7e-174 614.4 382 78.3
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 1.5e-173 613.2 382 78.0
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 3.3e-173 612.1 382 78.0
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 4.3e-173 611.7 382 78.0
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 2.2e-172 609.4 385 76.4
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 4.8e-172 608.2 382 76.4
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 8.2e-172 607.4 382 76.4
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 1.4e-171 606.7 420 71.4
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 1.4e-171 606.7 382 75.9
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 3.1e-171 605.5 382 76.2
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 3.1e-171 605.5 400 75.8
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.2e-170 603.6 382 77.0
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 5.9e-170 601.3 382 75.4
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 7.7e-170 600.9 382 75.1
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 1.3e-169 600.1 380 75.3
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 1.7e-169 599.7 382 74.9
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 3.8e-169 598.6 382 74.6
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 6.5e-169 597.8 380 74.7
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 1.9e-168 596.3 382 75.9
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 2.5e-168 595.9 390 75.4
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 2.1e-167 592.8 388 73.7
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 8.8e-166 587.4 402 70.9
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.8e-163 579.7 392 74.0
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 5.9e-162 574.7 382 73.6
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 7.7e-162 574.3 398 72.1
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 3.6e-159 565.5 382 72.0
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 6.7e-158 561.2 382 71.7
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 1.3e-153 547.0 395 70.4
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 3.3e-149 532.3 382 70.7
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 3.7e-148 528.9 326 79.4
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 3.7e-148 528.9 301 83.4
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 6.8e-134 481.5 285 82.5
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 7.5e-133 478.0 382 63.9
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 1.4e-131 473.8 285 80.7
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.4e-131 473.8 382 63.9
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 3.9e-129 465.7 286 78.3
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 6.6e-121 438.3 293 74.1
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 8.6e-121 438.0 256 79.7
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 1.2e-119 434.1 305 71.5
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.2e-116 423.3 419 55.8
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 7.8e-114 414.8 394 54.8
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.1e-112 411.0 419 53.7
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 7.5e-109 398.3 389 54.0
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 2.5e-104 383.3 386 52.3
Lj1A366T12 Lonicera japonica HOM05D004763 ORTHO05D007492 7.3e-104 381.7 317 64.0
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 2.4e-99 366.7 430 47.4
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 4.6e-82 309.3 342 50.9
Lsat_1_v5_gn_1_126981 Lactuca sativa HOM05D004763 ORTHO05D007492 7.6e-69 265.4 374 43.0
Oeu036968.1 Olea europaea HOM05D004763 ORTHO05D007492 7.0e-46 189.1 104 79.8
TPR.G29742 Trifolium pratense HOM05D004763 ORTHO05D007492 7.7e-45 185.7 180 57.2
Lju1319A4T15 Lonicera japonica HOM05D004763 ORTHO05D007492 2.7e-42 177.2 96 84.4
CAN.G442.1 Capsicum annuum HOM05D004763 ORTHO05D007492 2.3e-41 174.1 98 82.7
PGSC0003DMG402029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 3.9e-41 173.3 96 84.4
Lj1C366G5 Lonicera japonica HOM05D004763 ORTHO05D007492 2.6e-37 160.6 88 84.1
Lsat_1_v5_gn_1_127201 Lactuca sativa HOM05D004763 ORTHO05D007492 3.2e-35 153.7 135 57.8
MBI09_g40619_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D019264 2.6e-32 144.1 106 69.8
MBI04_g09599_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 3.4e-32 143.7 106 69.8
MBI02_g24793_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 2.8e-31 140.6 106 68.9
Thecc.03G073800 Theobroma cacao HOM05D004763 ORTHO05D019264 1.5e-27 128.3 97 62.9
Lju1319C4G3 Lonicera japonica HOM05D004763 ORTHO05D014896 4.0e-25 120.2 183 44.8
PGSC0003DMG401017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 2.4e-22 110.9 113 51.3
Aa31LG8G7550 Aethionema arabicum HOM05D004763 ORTHO05D007492 3.5e-21 107.1 348 30.7
Lju1319A4T14 Lonicera japonica HOM05D004763 ORTHO05D019264 2.3e-17 94.4 54 83.3
Lsat_1_v5_gn_1_125620 Lactuca sativa HOM05D004763 ORTHO05D007492 4.1e-14 83.6 197 33.5
Lsat_1_v5_gn_1_126960 Lactuca sativa HOM05D004763 ORTHO05D012314 1.5e-11 75.1 68 51.5
PGSC0003DMG400026817 Solanum tuberosum HOM05D004763 ORTHO05D026177 1.2e-10 72.0 81 53.1
PGSC0003DMG400019106 Solanum tuberosum HOM05D004763 ORTHO05D007492 3.1e-09 67.4 37 83.8
Solyc11g028310.3 Solanum lycopersicum HOM05D004763 ORTHO05D026177 6.8e-09 66.2 63 61.9
Lsat_1_v5_gn_1_126941 Lactuca sativa HOM05D004763 ORTHO05D007492 4.4e-08 63.5 61 49.2
Solyc12g036030.1 Solanum lycopersicum HOM05D004763 ORTHO05D026177 4.4e-08 63.5 101 43.6
Solyc11g028340.3 Solanum lycopersicum HOM05D004763 ORTHO05D019264 4.9e-07 60.1 48 58.3
Ca_01269_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 1.4e-06 58.5 35 77.1


User provided reference genes

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