Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.3e-176 622.1 302 100.0
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.2e-33 145.6 96 69.8
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.5e-31 141.0 93 69.9
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.5e-31 139.4 108 61.1
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 4.5e-31 139.4 89 71.9
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 7.6e-31 138.7 89 73.0
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 7.6e-31 138.7 89 73.0
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 7.6e-31 138.7 89 70.8
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 9.9e-31 138.3 89 71.9
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 9.9e-31 138.3 89 71.9
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 9.9e-31 138.3 89 71.9
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.3e-30 137.9 109 61.5
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-30 137.1 89 70.8
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-30 137.1 88 71.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-30 137.1 88 71.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 2.2e-30 137.1 88 71.6
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 2.2e-30 137.1 89 73.0
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.2e-30 137.1 88 71.6
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 2.9e-30 136.7 89 69.7
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 3.8e-30 136.3 89 71.9
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 4.9e-30 136.0 88 71.6
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 4.9e-30 136.0 89 69.7
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 8.4e-30 135.2 89 68.5
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 8.4e-30 135.2 89 67.4
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 8.4e-30 135.2 89 68.5
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 8.4e-30 135.2 89 69.7
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 8.4e-30 135.2 89 69.7
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 1.1e-29 134.8 88 69.3
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.1e-29 134.8 108 61.1
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.4e-29 134.4 88 70.5
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.4e-29 134.4 88 69.3
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.4e-29 134.4 119 54.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 1.4e-29 134.4 89 70.8
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.9e-29 134.0 89 68.5
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 1.9e-29 134.0 89 69.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 2.4e-29 133.7 107 60.7
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.4e-29 133.7 97 63.9
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.4e-29 133.7 89 69.7
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 2.4e-29 133.7 108 60.2
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.4e-29 133.7 89 67.4
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 2.4e-29 133.7 108 60.2
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 3.2e-29 133.3 89 69.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 3.2e-29 133.3 89 66.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 3.2e-29 133.3 108 60.2
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.2e-29 132.9 108 61.1
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 4.2e-29 132.9 89 67.4
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 5.5e-29 132.5 91 67.0
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 5.5e-29 132.5 88 69.3
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 5.5e-29 132.5 89 71.9
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 5.5e-29 132.5 89 68.5
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 5.5e-29 132.5 89 66.3
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 7.1e-29 132.1 89 66.3
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 7.1e-29 132.1 89 67.4
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 7.1e-29 132.1 89 65.2
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 9.3e-29 131.7 108 58.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 9.3e-29 131.7 89 67.4
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 9.3e-29 131.7 89 67.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 9.3e-29 131.7 89 68.5
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 9.3e-29 131.7 108 59.3
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.2e-28 131.3 88 68.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.2e-28 131.3 88 67.0
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.2e-28 131.3 89 68.5
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.2e-28 131.3 89 66.3
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.2e-28 131.3 88 70.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.6e-28 131.0 92 70.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 2.7e-28 130.2 89 68.5
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 2.7e-28 130.2 89 67.4
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.7e-28 130.2 89 68.5
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 2.7e-28 130.2 89 67.4
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 3.5e-28 129.8 89 67.4
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 4.6e-28 129.4 89 65.2
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 4.6e-28 129.4 89 67.4
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 4.6e-28 129.4 89 68.5
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 6.0e-28 129.0 89 68.5
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 6.0e-28 129.0 89 68.5
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 7.9e-28 128.6 89 68.5
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 7.9e-28 128.6 89 67.4
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 7.9e-28 128.6 89 68.5
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.3e-27 127.9 89 65.2
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.3e-27 127.9 89 64.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.3e-27 127.9 89 67.4
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 1.3e-27 127.9 89 67.4
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.8e-27 127.5 89 67.4
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.3e-27 127.1 89 67.4
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.3e-27 127.1 89 67.4
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.3e-27 127.1 88 68.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 2.3e-27 127.1 89 64.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.0e-27 126.7 89 67.4
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 3.0e-27 126.7 89 66.3
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 3.9e-27 126.3 97 61.9
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 5.1e-27 125.9 121 52.1
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 8.7e-27 125.2 89 66.3
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.1e-26 124.8 97 60.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.9e-26 124.0 89 64.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.5e-26 123.6 89 68.5
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 3.3e-26 123.2 88 64.8
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 9.6e-26 121.7 88 64.8
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 9.6e-26 121.7 88 64.8
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 9.6e-26 121.7 89 65.2
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 6.2e-25 119.0 89 59.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.4e-24 117.9 89 65.2
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.4e-24 117.9 113 53.1
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 6.9e-24 115.5 89 64.0
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.2e-22 110.5 89 61.8
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.2e-22 110.5 89 61.8
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.6e-20 104.4 98 55.1
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 3.9e-19 99.8 91 56.0
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-18 98.2 108 47.2
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.1e-18 98.2 101 52.5


User provided reference genes

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