Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27972 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 1.6e-135 486.1 245 100.0
MBI11_g09466_MAGBIO Magnolia biondii HOM05D004387 ORTHO05D005218 6.4e-36 155.2 146 58.2
Aqoxy2G02875 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 3.9e-33 146.0 137 58.4
COL.COLO4_28283 Corchorus olitorius HOM05D004387 ORTHO05D005218 5.0e-33 145.6 180 49.4
Manes.08G050500 Manihot esculenta HOM05D004387 ORTHO05D005218 8.6e-33 144.8 177 48.0
CANSAT21G1698 Cannabis sativa HOM05D004387 ORTHO05D005218 1.9e-32 143.7 177 48.6
RcHm_v2.0_Chr3g0482341 Rosa chinensis HOM05D004387 ORTHO05D005218 1.9e-32 143.7 137 56.9
TAR633G2397 Trochodendron aralioides HOM05D004387 ORTHO05D005218 2.5e-32 143.3 166 48.8
Duzib093G1767 Durio zibethinus HOM05D004387 ORTHO05D005218 3.3e-32 142.9 137 55.5
Potri.016G055600 Populus trichocarpa HOM05D004387 ORTHO05D005218 3.3e-32 142.9 139 54.0
Thecc.05G153400 Theobroma cacao HOM05D004387 ORTHO05D005218 7.3e-32 141.7 166 50.6
Lalb_Chr20g0110501 Lupinus albus HOM05D004387 ORTHO05D005218 9.5e-32 141.4 139 52.5
Potri.006G051200 Populus trichocarpa HOM05D004387 ORTHO05D005218 9.5e-32 141.4 141 53.2
QL02p103266 Quercus lobata HOM05D004387 ORTHO05D005218 9.5e-32 141.4 140 54.3
MELO3C023136.2 Cucumis melo HOM05D004387 ORTHO05D005218 1.2e-31 141.0 146 54.1
CsaV3_4G011700 Cucumis sativus L. HOM05D004387 ORTHO05D005218 1.6e-31 140.6 150 52.0
FAN02G2904 Fragaria x ananassa HOM05D004387 ORTHO05D005218 1.6e-31 140.6 137 56.2
FAN05G1657 Fragaria x ananassa HOM05D004387 ORTHO05D005218 1.6e-31 140.6 137 56.2
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 2.1e-31 140.2 137 56.2
FAN14G1242 Fragaria x ananassa HOM05D004387 ORTHO05D005218 2.1e-31 140.2 132 57.6
Haze_19856 Corylus avellana HOM05D004387 ORTHO05D005218 2.8e-31 139.8 150 54.7
FvH4_6g23810 Fragaria vesca HOM05D004387 ORTHO05D005218 3.6e-31 139.4 137 56.2
Lalb_Chr01g0017301 Lupinus albus HOM05D004387 ORTHO05D005218 3.6e-31 139.4 139 53.2
Prupe.7G061000 Prunus persica HOM05D004387 ORTHO05D005218 3.6e-31 139.4 137 53.3
Rhsim09G0155500 Rhododendron simsii HOM05D004387 ORTHO05D005218 3.6e-31 139.4 179 45.3
TWI77G0383 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 3.6e-31 139.4 139 54.0
GSVIVG01033276001 Vitis vinifera HOM05D004387 ORTHO05D005218 3.6e-31 139.4 146 52.7
Actinidia17236 Actinidia chinensis HOM05D004387 ORTHO05D005218 4.7e-31 139.0 177 47.5
CiPaw.09G038200 Carya illinoinensis HOM05D004387 ORTHO05D005218 4.7e-31 139.0 139 52.5
Gohir.D01G090600 Gossypium hirsutum HOM05D004387 ORTHO05D005218 4.7e-31 139.0 137 55.5
ECA248G3203 Erigeron canadensis HOM05D004387 ORTHO05D005218 6.2e-31 138.7 177 46.3
Sed0012804 Sechium edule HOM05D004387 ORTHO05D005218 6.2e-31 138.7 146 54.1
Nitab4.5_0009442g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 8.1e-31 138.3 137 54.0
Gohir.D01G008666 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.1e-30 137.9 144 53.5
ClCG04G000120 Citrullus lanatus HOM05D004387 ORTHO05D005218 1.4e-30 137.5 125 57.6
Gohir.A02G158900 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.4e-30 137.5 137 54.7
MD12G1073800 Malus domestica HOM05D004387 ORTHO05D005218 1.4e-30 137.5 166 48.8
CSS0003189 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.8e-30 137.1 139 54.0
Cc07_g20870 Coffea canephora HOM05D004387 ORTHO05D005218 1.8e-30 137.1 178 47.2
Dinv39602 Davidia involucrata HOM05D004387 ORTHO05D005218 1.8e-30 137.1 139 53.2
Gorai.002G116000 Gossypium raimondii HOM05D004387 ORTHO05D005218 1.8e-30 137.1 137 54.7
Aqoxy5G00267 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 2.3e-30 136.7 137 53.3
Gohir.A01G009000 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.3e-30 136.7 137 54.0
Atru.chr1.1097 Acer truncatum HOM05D004387 ORTHO05D005218 3.1e-30 136.3 137 50.4
Cfa016818 Carpinus fangiana HOM05D004387 ORTHO05D005218 3.1e-30 136.3 179 46.9
Hma1.2p1_0953F.1_g241060 Hydrangea macrophylla HOM05D004387 ORTHO05D005218 4.0e-30 136.0 137 52.6
Sabra06G0035900 Salix brachista HOM05D004387 ORTHO05D005218 4.0e-30 136.0 183 46.4
CAN.G1001.5 Capsicum annuum HOM05D004387 ORTHO05D005218 5.2e-30 135.6 146 52.1
Cc06_g17110 Coffea canephora HOM05D004387 ORTHO05D005218 5.2e-30 135.6 146 52.1
PSO357G0544 Papaver somniferum HOM05D004387 ORTHO05D005218 5.2e-30 135.6 178 47.2
Sopen06g031800 Solanum pennellii HOM05D004387 ORTHO05D005218 5.2e-30 135.6 146 52.7
Ciclev10005512m.g Citrus clementina HOM05D004387 ORTHO05D005218 6.8e-30 135.2 137 54.7
Dinv12482 Davidia involucrata HOM05D004387 ORTHO05D005218 6.8e-30 135.2 137 53.3
CAN.G128.9 Capsicum annuum HOM05D004387 ORTHO05D005218 8.9e-30 134.8 137 53.3
Cpa.g.sc3.336 Carica papaya HOM05D004387 ORTHO05D005218 8.9e-30 134.8 137 54.7
Peaxi162Scf00354g00222 Petunia axillaris HOM05D004387 ORTHO05D005218 8.9e-30 134.8 137 49.6
Sc13g0001760 Simmondsia chinensis HOM05D004387 ORTHO05D005218 8.9e-30 134.8 177 44.1
Lju124A41T49 Lonicera japonica HOM05D004387 ORTHO05D005218 1.5e-29 134.0 137 51.8
Nitab4.5_0004587g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 1.5e-29 134.0 137 52.6
PGSC0003DMG400007507 Solanum tuberosum HOM05D004387 ORTHO05D005218 1.5e-29 134.0 146 52.1
PSO170G6628 Papaver somniferum HOM05D004387 ORTHO05D005218 2.0e-29 133.7 178 46.6
Psat6g037480 Pisum sativum HOM05D004387 ORTHO05D005218 2.6e-29 133.3 179 43.6
Hund05284 Selenicereus undatus HOM05D004387 ORTHO05D005218 2.6e-29 133.3 137 54.0
Solyc06g075390.4 Solanum lycopersicum HOM05D004387 ORTHO05D005218 2.6e-29 133.3 146 52.7
Solyc10g080130.3 Solanum lycopersicum HOM05D004387 ORTHO05D005218 2.6e-29 133.3 137 51.8
SGA_v2.0_scaffold94G28486 Striga asiatica HOM05D004387 ORTHO05D005218 2.6e-29 133.3 179 45.3
Lsat_1_v5_gn_5_161440 Lactuca sativa HOM05D004387 ORTHO05D005218 3.4e-29 132.9 179 41.9
Glyma.18G267600 Glycine max HOM05D004387 ORTHO05D005218 5.8e-29 132.1 139 50.4
TPR.G24500 Trifolium pratense HOM05D004387 ORTHO05D005218 5.8e-29 132.1 180 42.8
Sopen10g030740 Solanum pennellii HOM05D004387 ORTHO05D005218 9.9e-29 131.3 137 51.1
PGSC0003DMG400023725 Solanum tuberosum HOM05D004387 ORTHO05D005218 9.9e-29 131.3 137 51.8
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea HOM05D004387 ORTHO05D005218 1.3e-28 131.0 179 41.9
Medtr1g007060 Medicago truncatula HOM05D004387 ORTHO05D005218 1.3e-28 131.0 148 48.0
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea HOM05D004387 ORTHO05D005218 1.7e-28 130.6 179 41.3
Glyma.08G246800 Glycine max HOM05D004387 ORTHO05D005218 1.7e-28 130.6 137 52.6
Phvul.011G181200 Phaseolus vulgaris HOM05D004387 ORTHO05D005218 1.7e-28 130.6 148 47.3
Migut.K00090 Erythranthe guttata HOM05D004387 ORTHO05D005218 2.2e-28 130.2 137 50.4
VMungo0331G1303 Vigna mungo HOM05D004387 ORTHO05D005218 2.2e-28 130.2 137 51.8
Pp3c19_14820 Physcomitrium patens HOM05D004387 ORTHO05D005218 3.7e-28 129.4 151 49.7
Eucgr.A00263 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.9e-28 129.0 137 48.2
Glyma.14G145600 Glycine max HOM05D004387 ORTHO05D005218 6.4e-28 128.6 137 48.9
TWI74G1664 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 6.4e-28 128.6 168 47.0
Eucgr.A00059 Eucalyptus grandis HOM05D004387 ORTHO05D005218 8.3e-28 128.3 177 41.2
PGR142G2016 Punica granatum HOM05D004387 ORTHO05D005218 1.1e-27 127.9 179 43.0
SGA_v2.0_scaffold273G46436 Striga asiatica HOM05D004387 ORTHO05D005218 1.1e-27 127.9 137 48.9
Ca_03365_v3 Cicer arietinum L. HOM05D004387 ORTHO05D005218 1.4e-27 127.5 179 40.8
Lj6g0019382 Lotus japonicus HOM05D004387 ORTHO05D005218 1.4e-27 127.5 172 41.9
HanXRQChr06g0178491 Helianthus annuus HOM05D004387 ORTHO05D005218 4.1e-27 125.9 177 40.7
MSTRG.10813 Avicennia marina HOM05D004387 ORTHO05D005218 1.2e-26 124.4 137 49.6
HanXRQChr01g0008751 Helianthus annuus HOM05D004387 ORTHO05D005218 1.2e-26 124.4 177 41.2
Lj4g0008518 Lotus japonicus HOM05D004387 ORTHO05D005218 1.2e-26 124.4 173 40.5
Oeu017945.1 Olea europaea HOM05D004387 ORTHO05D005218 1.2e-26 124.4 182 45.1
ATR0626G351 Amborella trichopoda HOM05D004387 ORTHO05D005218 2.1e-26 123.6 140 47.1
DCAR_013603 Daucus carota HOM05D004387 ORTHO05D005218 2.1e-26 123.6 140 47.1
Eucgr.A00069 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.5e-26 122.9 177 42.4
HPP92_019752 Vanilla planifolia HOM05D004387 ORTHO05D005218 3.5e-26 122.9 146 50.0
vmacro09074 Vaccinium macrocarpon HOM05D004387 ORTHO05D005218 6.0e-26 122.1 169 42.6
Mapoly0071s0030 Marchantia polymorpha HOM05D004387 ORTHO05D005218 1.3e-25 120.9 169 46.2
AT1G60080 Arabidopsis thaliana HOM05D004387 ORTHO05D005218 3.9e-25 119.4 173 41.0
CSS0024704 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 5.1e-25 119.0 142 50.7
Carub.0002s0514 Capsella rubella HOM05D004387 ORTHO05D005218 5.1e-25 119.0 173 41.6
Thhalv10023611m.g Eutrema salsugineum HOM05D004387 ORTHO05D005218 8.6e-25 118.2 162 43.8
A09p17690 Brassica napus HOM05D004387 ORTHO05D005218 2.5e-24 116.7 175 42.3
BcaC04g22217 Brassica carinata HOM05D004387 ORTHO05D005218 3.3e-24 116.3 172 39.5
BraA09t37397Z Brassica rapa HOM05D004387 ORTHO05D005218 3.3e-24 116.3 172 39.5
Sp2g04520 Schrenkiella parvula HOM05D004387 ORTHO05D005218 3.3e-24 116.3 164 42.1
AL2G16570 Arabidopsis lyrata HOM05D004387 ORTHO05D005218 5.6e-24 115.5 173 40.5
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus HOM05D004387 ORTHO05D005218 5.6e-24 115.5 175 42.3
C09p22030 Brassica napus HOM05D004387 ORTHO05D005218 5.6e-24 115.5 175 42.3
BolC9t55109H Brassica oleracea HOM05D004387 ORTHO05D005218 5.6e-24 115.5 175 42.3
BcaB07g31201 Brassica carinata HOM05D004387 ORTHO05D005218 9.5e-24 114.8 171 41.5
CSS0010572 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 9.5e-24 114.8 140 47.9
Ah.13g076470 Amaranthus hybridus HOM05D004387 ORTHO05D005218 1.2e-23 114.4 180 40.0
CARHR052860 Cardamine hirsuta HOM05D004387 ORTHO05D005218 2.1e-23 113.6 142 45.1
Aa31LG2G10160 Aethionema arabicum HOM05D004387 ORTHO05D005218 1.4e-22 110.9 170 36.5
Os11g0311300 Oryza sativa ssp. japonica HOM05D004387 ORTHO05D005218 1.2e-21 107.8 167 41.3
SMO169G0201 Selaginella moellendorffii HOM05D004387 ORTHO05D005218 1.5e-21 107.5 142 44.4
unitig_46.g18443 Utricularia gibba HOM05D004387 ORTHO05D005218 1.5e-21 107.5 142 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2801 Anthoceros agrestis HOM05D004387 ORTHO05D005218 2.6e-21 106.7 135 48.9
Cfa006454 Carpinus fangiana HOM05D004387 ORTHO05D005218 3.4e-21 106.3 152 44.7
EL10Ac3g07090 Beta vulgaris HOM05D004387 ORTHO05D005218 4.4e-21 105.9 100 57.0
THA.LOC104823663 Tarenaya hassleriana HOM05D004387 ORTHO05D005218 9.9e-21 104.8 135 44.4
CDE04G2438 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 2.2e-20 103.6 122 46.7
CSS0026699 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 3.8e-20 102.8 152 42.8
Zm00001eb175450 Zea mays HOM05D004387 ORTHO05D005218 6.4e-20 102.1 146 43.2
Actinidia38546 Actinidia chinensis HOM05D004387 ORTHO05D005218 1.9e-19 100.5 152 41.4
BcaC09g49432 Brassica carinata HOM05D004387 ORTHO05D005218 4.1e-19 99.4 139 43.9
C01p36790 Brassica napus HOM05D004387 ORTHO05D005218 7.1e-19 98.6 133 45.1
BolC1t03637H Brassica oleracea HOM05D004387 ORTHO05D005218 7.1e-19 98.6 133 45.1
AUR62024448 Chenopodium quinoa HOM05D004387 ORTHO05D005218 1.6e-18 97.4 141 43.3
Gorai.002G010400 Gossypium raimondii HOM05D004387 ORTHO05D005218 2.1e-18 97.1 138 43.5
Nitab4.5_0005483g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 1.1e-16 91.3 68 64.7
Nn2g15223 Nelumbo nucifera HOM05D004387 ORTHO05D005218 4.3e-16 89.4 137 40.1
AUR62026038 Chenopodium quinoa HOM05D004387 ORTHO05D005218 2.1e-15 87.0 166 38.0
Eucgr.A00266 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.1e-14 84.7 164 36.6
CSS0027602 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 2.4e-14 83.6 114 44.7
CSS0046204 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 4.4e-13 79.3 147 37.4
Eucgr.A00267 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.9e-12 75.9 76 48.7
Cre10.g440900 Chlamydomonas reinhardtii HOM05D004387 ORTHO05D005218 7.1e-11 72.0 82 42.7
CBR_g20981 Chara braunii HOM05D004387 ORTHO05D005218 1.9e-08 63.9 71 43.7
CBR_g41407 Chara braunii HOM05D004387 ORTHO05D005218 9.6e-08 61.6 133 30.8
MCO07G362 Micromonas commoda HOM05D004387 ORTHO05D005218 1.3e-07 61.2 143 30.8


User provided reference genes

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