Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 5.7e-118 427.6 211 100.0
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.5e-113 412.1 208 98.6
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 1.6e-48 196.8 143 62.9
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 3.7e-48 195.7 150 62.7
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 8.2e-48 194.5 142 59.9
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 6.9e-47 191.4 140 62.9
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 6.9e-47 191.4 140 62.9
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 9.0e-47 191.0 132 65.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 9.0e-47 191.0 131 66.4
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 1.2e-46 190.7 177 52.0
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 1.2e-46 190.7 125 68.8
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 1.2e-46 190.7 136 62.5
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 1.5e-46 190.3 136 61.8
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 2.6e-46 189.5 197 50.3
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 3.4e-46 189.1 202 49.5
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 4.5e-46 188.7 144 59.0
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 5.8e-46 188.3 131 66.4
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 7.6e-46 188.0 121 68.6
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 1.7e-45 186.8 185 50.3
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 1.7e-45 186.8 131 64.1
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 2.9e-45 186.0 186 51.1
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 2.9e-45 186.0 186 51.1
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 2.9e-45 186.0 151 58.9
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 3.8e-45 185.7 143 58.7
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 5.0e-45 185.3 123 65.0
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 5.0e-45 185.3 134 64.9
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 5.0e-45 185.3 131 64.1
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 6.5e-45 184.9 121 66.1
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 6.5e-45 184.9 134 61.2
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 8.4e-45 184.5 131 64.1
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 8.4e-45 184.5 121 66.1
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 1.1e-44 184.1 160 53.8
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 1.1e-44 184.1 185 49.7
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 1.1e-44 184.1 185 49.7
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 1.1e-44 184.1 185 49.7
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.4e-44 183.7 192 50.5
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.4e-44 183.7 137 61.3
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 1.9e-44 183.3 109 72.5
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 2.5e-44 183.0 121 67.8
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 2.5e-44 183.0 137 60.6
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 2.5e-44 183.0 139 59.0
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 4.2e-44 182.2 134 59.7
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 4.2e-44 182.2 142 60.6
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 4.2e-44 182.2 121 66.9
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 4.2e-44 182.2 134 64.2
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 5.5e-44 181.8 187 49.7
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 5.5e-44 181.8 121 66.1
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 5.5e-44 181.8 132 63.6
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 7.1e-44 181.4 131 62.6
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 7.1e-44 181.4 187 50.3
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 7.1e-44 181.4 121 65.3
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 1.2e-43 180.6 131 62.6
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 1.2e-43 180.6 121 66.1
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 1.2e-43 180.6 131 62.6
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 2.1e-43 179.9 126 62.7
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 2.7e-43 179.5 121 66.1
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 6.1e-43 178.3 128 62.5
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 7.9e-43 177.9 134 62.7
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 7.9e-43 177.9 106 72.6
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 7.9e-43 177.9 149 56.4
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 7.9e-43 177.9 148 56.8
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 7.9e-43 177.9 115 67.8
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.3e-42 177.2 116 66.4
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 1.8e-42 176.8 118 66.9
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 1.8e-42 176.8 106 71.7
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.0e-42 176.0 152 55.3
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 3.9e-42 175.6 135 57.0
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 6.7e-42 174.9 195 46.7
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.5e-41 173.7 106 70.8
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 1.5e-41 173.7 128 61.7
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 1.9e-41 173.3 139 57.6
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 3.3e-41 172.6 128 61.7
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 3.3e-41 172.6 128 61.7
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.3e-40 170.6 121 62.8
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 3.7e-40 169.1 106 68.9
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 4.8e-40 168.7 119 64.7
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 8.2e-40 167.9 106 69.8
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 1.1e-39 167.5 121 59.5
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 1.4e-39 167.2 121 59.5
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 3.1e-39 166.0 159 50.3
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 4.1e-39 165.6 130 56.2
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 5.3e-39 165.2 126 59.5
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.4e-38 162.5 95 73.7
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 7.7e-38 161.4 97 71.1
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 3.8e-37 159.1 99 70.7
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 1.9e-36 156.8 141 49.6
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 4.2e-36 155.6 97 71.1
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 6.1e-35 151.8 155 49.0
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 8.2e-32 141.4 97 66.0
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 1.8e-31 140.2 95 66.3
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 4.1e-31 139.0 85 72.9
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 1.5e-30 137.1 95 66.3
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 4.5e-30 135.6 106 53.8
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 2.5e-28 129.8 112 56.2
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 7.9e-27 124.8 71 77.5
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 5.1e-26 122.1 66 78.8
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.7e-24 117.1 65 76.9
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 4.8e-24 115.5 65 75.4
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 1.4e-23 114.0 66 72.7
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 3.5e-22 109.4 77 64.9
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 2.5e-20 103.2 56 75.0
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 4.2e-20 102.4 56 75.0
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 4.2e-20 102.4 56 75.0
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 8.0e-19 98.2 60 75.0
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.7e-17 92.0 56 69.6
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 8.2e-16 88.2 92 45.7
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 7.0e-15 85.1 113 43.4
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.2e-13 80.1 106 39.6
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 2.5e-12 76.6 40 75.0
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 7.2e-12 75.1 64 51.6
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.1e-11 73.6 65 49.2
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.1e-11 73.6 65 49.2
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 4.7e-11 72.4 40 70.0
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 3.5e-06 56.2 95 35.8


User provided reference genes

Program Settings