Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26695 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 5.2e-93 344.4 171 100.0
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 6.4e-27 124.8 151 41.7
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 8.4e-27 124.4 88 61.4
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 8.4e-27 124.4 152 42.8
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 8.4e-27 124.4 153 41.2
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 8.4e-27 124.4 85 63.5
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 1.1e-26 124.0 85 62.4
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 1.4e-26 123.6 85 61.2
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.4e-26 123.6 93 55.9
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 1.4e-26 123.6 147 42.9
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 1.9e-26 123.2 147 42.2
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 2.4e-26 122.9 147 42.9
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 2.4e-26 122.9 152 43.4
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 2.4e-26 122.9 151 41.7
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 2.4e-26 122.9 152 40.1
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 3.2e-26 122.5 151 41.1
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 3.2e-26 122.5 148 39.9
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 4.2e-26 122.1 147 41.5
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 4.2e-26 122.1 90 58.9
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 5.4e-26 121.7 152 39.5
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-26 121.7 154 40.3
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-26 121.7 154 40.3
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-26 121.7 154 40.3
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.2e-25 120.6 145 42.1
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.2e-25 120.6 151 40.4
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.2e-25 120.6 99 54.5
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.6e-25 120.2 152 42.1
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 1.6e-25 120.2 152 42.1
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 2.1e-25 119.8 90 58.9
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 2.1e-25 119.8 151 41.1
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 2.1e-25 119.8 89 56.2
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 2.1e-25 119.8 154 39.0
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 2.7e-25 119.4 81 60.5
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 2.7e-25 119.4 145 42.8
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.5e-25 119.0 79 62.0
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 3.5e-25 119.0 144 40.3
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 3.5e-25 119.0 90 60.0
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 4.6e-25 118.6 152 41.4
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 4.6e-25 118.6 162 39.5
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 6.0e-25 118.2 141 40.4
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.0e-25 118.2 79 62.0
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 6.0e-25 118.2 148 40.5
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 6.0e-25 118.2 152 40.8
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 7.9e-25 117.9 150 40.7
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 7.9e-25 117.9 141 41.8
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 7.9e-25 117.9 148 39.9
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 7.9e-25 117.9 152 40.8
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 7.9e-25 117.9 152 41.4
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 1.0e-24 117.5 152 41.4
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.0e-24 117.5 155 36.8
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 1.3e-24 117.1 157 38.2
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.3e-24 117.1 149 38.9
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 1.3e-24 117.1 141 41.1
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 2.3e-24 116.3 145 38.6
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 2.3e-24 116.3 90 60.0
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 2.3e-24 116.3 147 40.1
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 3.0e-24 115.9 87 52.9
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 3.0e-24 115.9 85 60.0
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 3.0e-24 115.9 152 38.8
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 3.0e-24 115.9 145 42.1
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 3.9e-24 115.5 90 55.6
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 3.9e-24 115.5 150 39.3
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 3.9e-24 115.5 147 40.1
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 5.1e-24 115.2 89 58.4
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 5.1e-24 115.2 152 40.8
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 5.1e-24 115.2 147 41.5
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 6.7e-24 114.8 150 39.3
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 6.7e-24 114.8 147 40.1
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 8.7e-24 114.4 147 40.8
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 1.5e-23 113.6 152 40.8
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 1.9e-23 113.2 154 38.3
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 2.5e-23 112.8 147 40.1
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 4.3e-23 112.1 82 56.1
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 4.3e-23 112.1 85 56.5
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 4.3e-23 112.1 90 54.4
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 9.6e-23 110.9 150 38.0
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 9.6e-23 110.9 87 54.0
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 1.3e-22 110.5 85 55.3
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 1.6e-22 110.2 150 37.3
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 1.6e-22 110.2 150 37.3
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 1.6e-22 110.2 150 37.3
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.6e-22 110.2 149 37.6
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 2.1e-22 109.8 85 52.9
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 2.1e-22 109.8 147 38.1
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 2.1e-22 109.8 157 38.2
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 2.1e-22 109.8 153 37.9
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 2.8e-22 109.4 160 37.5
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 4.8e-22 108.6 83 53.0
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 4.8e-22 108.6 78 56.4
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 6.2e-22 108.2 153 35.9
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 8.1e-22 107.8 147 36.7
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 8.1e-22 107.8 85 52.9
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 1.1e-21 107.5 89 50.6
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 1.1e-21 107.5 90 55.6
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 2.4e-21 106.3 150 36.0
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.4e-21 106.3 78 55.1
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 3.1e-21 105.9 93 51.6
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 4.0e-21 105.5 79 53.2
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 5.3e-21 105.1 76 59.2
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 9.0e-21 104.4 85 52.9
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 9.0e-21 104.4 152 38.8
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 9.0e-21 104.4 153 34.6
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 1.2e-20 104.0 173 32.4
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 2.0e-20 103.2 148 35.1
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 1.3e-19 100.5 147 40.8
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 2.9e-19 99.4 124 41.1
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 4.9e-19 98.6 89 47.2
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 6.5e-19 98.2 78 53.8
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 1.4e-18 97.1 152 36.2
SEGI_09265 Sequoiadendron giganteum HOM05D004647 ORTHO05D387083 2.5e-18 96.3 52 96.2
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 3.2e-18 95.9 73 60.3
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 4.2e-18 95.5 127 37.8
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 4.2e-18 95.5 115 41.7
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 5.5e-18 95.1 62 61.3
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 2.8e-14 82.8 142 35.9
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 8.2e-14 81.3 62 53.2
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 1.1e-13 80.9 53 64.2
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 2.6e-12 76.3 116 36.2
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 5.0e-11 72.0 64 54.7
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 1.9e-10 70.1 113 33.6
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 1.3e-08 63.9 105 35.2
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 1.8e-08 63.5 152 28.3
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 5.1e-08 62.0 42 66.7
Cc00_g18100 Coffea canephora HOM05D004647 ORTHO05D005349 8.7e-08 61.2 36 69.4
Cc00_g25260 Coffea canephora HOM05D004647 ORTHO05D005349 1.9e-07 60.1 36 69.4


User provided reference genes

Program Settings