Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21661 Sequoiadendron giganteum HOM05D000246 ORTHO05D002923 1.2e-194 682.9 344 100.0
SEGI_40381 Sequoiadendron giganteum HOM05D000246 ORTHO05D002923 1.4e-102 377.1 194 99.5
FAN19G0632 Fragaria x ananassa HOM05D000246 ORTHO05D002923 2.2e-50 203.8 334 39.5
FvH4_1g08920 Fragaria vesca HOM05D000246 ORTHO05D002923 3.7e-50 203.0 335 40.0
QL11p001087 Quercus lobata HOM05D000246 ORTHO05D002923 2.1e-48 197.2 334 38.9
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 1.7e-47 194.1 337 35.9
FAN26G3144 Fragaria x ananassa HOM05D000246 ORTHO05D002923 3.9e-47 193.0 332 36.7
Haze_26028 Corylus avellana HOM05D000246 ORTHO05D002923 5.1e-47 192.6 351 36.8
RcHm_v2.0_Chr2g0095381 Rosa chinensis HOM05D000246 ORTHO05D002923 5.1e-47 192.6 335 36.7
FAN26G1353 Fragaria x ananassa HOM05D000246 ORTHO05D002923 8.6e-47 191.8 336 36.0
Dinv42407 Davidia involucrata HOM05D000246 ORTHO05D002923 7.3e-46 188.7 330 36.7
COL.COLO4_22511 Corchorus olitorius HOM05D000246 ORTHO05D002923 1.6e-45 187.6 335 37.0
PSO135G0853 Papaver somniferum HOM05D000246 ORTHO05D002923 1.6e-45 187.6 340 37.4
Gorai.007G190100 Gossypium raimondii HOM05D000246 ORTHO05D002923 2.1e-45 187.2 334 35.6
Psat1g134880 Pisum sativum HOM05D000246 ORTHO05D002923 8.1e-45 185.3 234 39.7
Rhsim03G0226800 Rhododendron simsii HOM05D000246 ORTHO05D002923 8.1e-45 185.3 329 36.2
EL10Ac8g19041 Beta vulgaris HOM05D000246 ORTHO05D002923 1.1e-44 184.9 323 38.7
Gohir.D11G178301 Gossypium hirsutum HOM05D000246 ORTHO05D002923 1.1e-44 184.9 334 35.9
AUR62025265 Chenopodium quinoa HOM05D000246 ORTHO05D002923 3.1e-44 183.3 341 36.7
Aqoxy4G00036 Aquilegia oxysepala HOM05D000246 ORTHO05D002923 6.8e-44 182.2 327 37.3
Prupe.7G196400 Prunus persica HOM05D000246 ORTHO05D002923 8.9e-44 181.8 337 36.2
Nn8g38604 Nelumbo nucifera HOM05D000246 ORTHO05D002923 2.0e-43 180.6 341 34.6
Hund08824 Selenicereus undatus HOM05D000246 ORTHO05D002923 2.0e-43 180.6 262 40.5
Gohir.A11G171400 Gossypium hirsutum HOM05D000246 ORTHO05D002923 2.6e-43 180.3 334 35.0
PGR044G0725 Punica granatum HOM05D000246 ORTHO05D002923 4.4e-43 179.5 334 34.1
AUR62028268 Chenopodium quinoa HOM05D000246 ORTHO05D002923 7.6e-43 178.7 331 37.2
MD02G1094600 Malus domestica HOM05D000246 ORTHO05D002923 7.6e-43 178.7 331 36.3
Medtr2g042440 Medicago truncatula HOM05D000246 ORTHO05D002923 7.6e-43 178.7 330 35.2
Potri.005G107400 Populus trichocarpa HOM05D000246 ORTHO05D002923 1.3e-42 177.9 239 40.6
Ca_02198_v3 Cicer arietinum L. HOM05D000246 ORTHO05D002923 1.7e-42 177.6 331 35.0
Eucgr.C03309 Eucalyptus grandis HOM05D000246 ORTHO05D002923 1.7e-42 177.6 331 34.7
Lj6g0009623 Lotus japonicus HOM05D000246 ORTHO05D002923 2.2e-42 177.2 334 35.0
Lj7A688T78 Lonicera japonica HOM05D000246 ORTHO05D002923 3.7e-42 176.4 334 36.5
TWI73G0392 Tripterygium wilfordii HOM05D000246 ORTHO05D002923 4.9e-42 176.0 252 40.5
BraA08t34125Z Brassica rapa HOM05D000246 ORTHO05D002923 6.4e-42 175.6 265 40.4
A08p21730 Brassica napus HOM05D000246 ORTHO05D002923 8.4e-42 175.3 265 40.4
BolC3t20340H Brassica oleracea HOM05D000246 ORTHO05D002923 1.1e-41 174.9 253 40.3
CSS0034040 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D002923 1.1e-41 174.9 257 40.5
Lalb_Chr11g0074201 Lupinus albus HOM05D000246 ORTHO05D002923 1.1e-41 174.9 335 34.6
Ciclev10027001m.g Citrus clementina HOM05D000246 ORTHO05D002923 1.4e-41 174.5 335 34.9
Duzib187G0449 Durio zibethinus HOM05D000246 ORTHO05D002923 1.4e-41 174.5 332 35.5
arahy.Tifrunner.gnm1.ann1.RX7A3U Arachis hypogaea HOM05D000246 ORTHO05D002923 2.4e-41 173.7 331 33.8
CANSAT56G0484 Cannabis sativa HOM05D000246 ORTHO05D002923 2.4e-41 173.7 315 39.0
MELO3C004659.2 Cucumis melo HOM05D000246 ORTHO05D002923 2.4e-41 173.7 323 35.3
Phvul.009G226500 Phaseolus vulgaris HOM05D000246 ORTHO05D002923 2.4e-41 173.7 330 34.8
TPR.G29957 Trifolium pratense HOM05D000246 ORTHO05D002923 2.4e-41 173.7 335 36.1
CsaV3_2G001100 Cucumis sativus L. HOM05D000246 ORTHO05D002923 3.2e-41 173.3 323 35.3
GSVIVG01015057001 Vitis vinifera HOM05D000246 ORTHO05D002923 4.1e-41 172.9 292 35.3
Actinidia29938 Actinidia chinensis HOM05D000246 ORTHO05D002923 5.4e-41 172.6 332 34.0
Ah.09g229260 Amaranthus hybridus HOM05D000246 ORTHO05D002923 7.1e-41 172.2 346 36.4
C03p80860 Brassica napus HOM05D000246 ORTHO05D002923 7.1e-41 172.2 248 40.3
Solyc07g042010.4 Solanum lycopersicum HOM05D000246 ORTHO05D002923 7.1e-41 172.2 235 39.1
SGA_v2.0_scaffold210G42058 Striga asiatica HOM05D000246 ORTHO05D002923 7.1e-41 172.2 236 38.6
vmacro06349 Vaccinium macrocarpon HOM05D000246 ORTHO05D002923 7.1e-41 172.2 345 35.7
arahy.Tifrunner.gnm1.ann1.N72NG6 Arachis hypogaea HOM05D000246 ORTHO05D002923 9.2e-41 171.8 334 33.8
Cc06_g12320 Coffea canephora HOM05D000246 ORTHO05D002923 1.2e-40 171.4 332 35.8
AagrBONN_evm.TU.Sc2ySwM_228.1588 Anthoceros agrestis HOM05D000246 ORTHO05D002923 1.6e-40 171.0 242 39.7
Manes.01G152300 Manihot esculenta HOM05D000246 ORTHO05D002923 1.6e-40 171.0 332 34.6
Sp7g33500 Schrenkiella parvula HOM05D000246 ORTHO05D002923 3.5e-40 169.9 328 36.9
Sopen07g021600 Solanum pennellii HOM05D000246 ORTHO05D002923 6.0e-40 169.1 238 39.1
Glyma.09G070600 Glycine max HOM05D000246 ORTHO05D002923 7.8e-40 168.7 330 33.3
Nitab4.5_0003308g0080 Nicotiana tabacum HOM05D000246 ORTHO05D002923 7.8e-40 168.7 235 39.1
AL7G15360 Arabidopsis lyrata HOM05D000246 ORTHO05D002923 2.3e-39 167.2 239 42.3
VMungo1309G1501 Vigna mungo HOM05D000246 ORTHO05D002923 2.3e-39 167.2 327 34.6
Peaxi162Scf00348g00213 Petunia axillaris HOM05D000246 ORTHO05D002923 3.0e-39 166.8 334 33.8
Sc18g0002650 Simmondsia chinensis HOM05D000246 ORTHO05D002923 3.9e-39 166.4 334 36.2
AT4G35740 Arabidopsis thaliana HOM05D000246 ORTHO05D002923 6.6e-39 165.6 239 42.3
ClCG11G001380 Citrullus lanatus HOM05D000246 ORTHO05D002923 1.5e-38 164.5 339 33.6
Carub.0007s0451 Capsella rubella HOM05D000246 ORTHO05D002923 2.5e-38 163.7 331 35.0
Nitab4.5_0000343g0300 Nicotiana tabacum HOM05D000246 ORTHO05D002923 3.3e-38 163.3 253 37.5
HanXRQChr04g0125951 Helianthus annuus HOM05D000246 ORTHO05D002923 4.3e-38 162.9 344 34.3
CARHR244080 Cardamine hirsuta HOM05D000246 ORTHO05D002923 1.2e-37 161.4 239 41.0
ECA236G3173 Erigeron canadensis HOM05D000246 ORTHO05D002923 3.6e-37 159.8 332 37.3
Thhalv10024545m.g Eutrema salsugineum HOM05D000246 ORTHO05D002923 3.6e-37 159.8 347 33.1
TAR383G0457 Trochodendron aralioides HOM05D000246 ORTHO05D002923 1.2e-35 154.8 314 31.8
DCAR_028481 Daucus carota HOM05D000246 ORTHO05D002923 1.5e-35 154.5 235 35.3
Lsat_1_v5_gn_8_85621 Lactuca sativa HOM05D000246 ORTHO05D002923 5.8e-35 152.5 267 34.5
unitig_26.g9412 Utricularia gibba HOM05D000246 ORTHO05D002923 5.8e-35 152.5 275 33.5
Zm00001eb257010 Zea mays HOM05D000246 ORTHO05D002923 5.8e-35 152.5 341 33.4
Aa31LG6G12690 Aethionema arabicum HOM05D000246 ORTHO05D002923 7.6e-35 152.1 332 32.8
CDE07G0069 Ceratophyllum demersum HOM05D000246 ORTHO05D002923 1.7e-34 151.0 327 34.9
Eucgr.C03312 Eucalyptus grandis HOM05D000246 ORTHO05D002923 1.7e-34 151.0 338 30.8
CBR_g12756 Chara braunii HOM05D000246 ORTHO05D002923 2.2e-34 150.6 237 36.3
Mapoly0051s0018 Marchantia polymorpha HOM05D000246 ORTHO05D002923 1.9e-33 147.5 334 32.3
Migut.K00583 Erythranthe guttata HOM05D000246 ORTHO05D002923 7.1e-33 145.6 253 33.6
BcaC01g00516 Brassica carinata HOM05D000246 ORTHO05D002923 2.1e-32 144.1 211 40.8
THA.LOC104819729 Tarenaya hassleriana HOM05D000246 ORTHO05D002923 5.1e-31 139.4 239 38.5
SMO244G0100 Selaginella moellendorffii HOM05D000246 ORTHO05D002923 2.5e-30 137.1 235 37.4
Cpa.g.sc6.338 Carica papaya HOM05D000246 ORTHO05D002923 3.4e-27 126.7 325 30.8
Sed0011036 Sechium edule HOM05D000246 ORTHO05D002923 2.9e-26 123.6 184 41.3
Thecc.01G009800 Theobroma cacao HOM05D000246 ORTHO05D002923 8.4e-26 122.1 184 39.1
FAN28G0117 Fragaria x ananassa HOM05D000246 ORTHO05D002923 7.9e-24 115.5 263 32.3
Cfa002973 Carpinus fangiana HOM05D000246 ORTHO05D002923 2.0e-19 100.9 109 45.0
CiPaw.03G204400 Carya illinoinensis HOM05D000246 ORTHO05D002923 1.1e-17 95.1 197 34.5
PGSC0003DMG400027884 Solanum tuberosum HOM05D000246 ORTHO05D002923 7.4e-14 82.4 106 39.6
HPP92_019116 Vanilla planifolia HOM05D000246 ORTHO05D002923 2.8e-13 80.5 67 55.2
HPP92_019117 Vanilla planifolia HOM05D000246 ORTHO05D002923 8.1e-13 79.0 195 29.7
Psat3g173400 Pisum sativum HOM05D000557 ORTHO05D014714 2.9e-10 70.5 87 39.1
PSO724G0110 Papaver somniferum HOM05D000246 ORTHO05D002923 3.2e-09 67.0 57 56.1
Duzib147G0203 Durio zibethinus HOM05D000246 ORTHO05D002923 1.1e-06 58.5 74 36.5


User provided reference genes

Program Settings