Gene: PGR044G0725
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G0725
- Transcript Identifier PGR044G0725.01
- Gene Type Coding gene
- Location NC_045134.1 : 5313633-5318808 : negative
Gene Family Information
- ID HOM05D000246
- #Genes/#Species 1713/100
- Phylogenetic origin
- ID ORTHO05D002923
- #Genes/#Species 254/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031374911.1
- name LOC116189400
- name XM_031519051.1
- id gene-LOC116189400
- uniprot A0A6P8C0I0
Descriptions
- product ATP-dependent DNA helicase Q-like 3, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc07g042010.4 |
| GO:0006310 | IEA | GOA Database | DNA recombination | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0032508 | IEA | GOA Database | DNA duplex unwinding |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0043138 | ISO | PLAZA Integrative Orthology | 3'-5' DNA helicase activity | AT4G35740 |
| GO:0009378 | ISO | PLAZA Integrative Orthology | four-way junction helicase activity | AT4G35740 |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc07g042010.4 |
| GO:0036310 | ISO | PLAZA Integrative Orthology | annealing activity | AT4G35740 |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003678 | IEA | GOA Database | DNA helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR001650 | Helicase, C-terminal |
| IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain |
| IPR004589 | DNA helicase, ATP-dependent, RecQ type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |