Gene: Sed0011036
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0011036
- Transcript Identifier Sed0011036.6
- Gene Type Coding gene
- Location LG03 : 12158608-12166000 : negative
Gene Family Information
- ID HOM05D000246
- #Genes/#Species 1713/100
- Phylogenetic origin
- ID ORTHO05D002923
- #Genes/#Species 254/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sed0011036.6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006310 | IEA | InterPro | DNA recombination | |
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc07g042010.4 |
GO:0032508 | ISO | PLAZA Integrative Orthology | DNA duplex unwinding | AT4G35740 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004386 | IEA | InterPro | helicase activity | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0036310 | ISO | PLAZA Integrative Orthology | annealing activity | AT4G35740 |
GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc07g042010.4 |
GO:0009378 | ISO | PLAZA Integrative Orthology | four-way junction helicase activity | AT4G35740 |
GO:0043138 | ISO | PLAZA Integrative Orthology | 3'-5' DNA helicase activity | AT4G35740 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR004589 | DNA helicase, ATP-dependent, RecQ type |
IPR001650 | Helicase, C-terminal |
IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain |
IPR011545 | DEAD/DEAH box helicase domain |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |