Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20924 Sequoiadendron giganteum HOM05D001075 ORTHO05D003859 0.0e+00 2171.0 1190 100.0
Mapoly0042s0123 Marchantia polymorpha HOM05D001075 ORTHO05D003859 9.6e-53 213.4 573 33.5
Pp3c15_22110 Physcomitrium patens HOM05D001075 ORTHO05D003859 1.8e-51 209.1 352 42.6
Pp3c15_22112 Physcomitrium patens HOM05D001075 ORTHO05D003859 1.8e-51 209.1 352 42.6
SMO139G0084 Selaginella moellendorffii HOM05D001075 ORTHO05D003859 2.0e-50 205.7 304 45.4
Pp3c9_18590 Physcomitrium patens HOM05D001075 ORTHO05D003859 3.2e-48 198.4 314 42.7
ATR0564G189 Amborella trichopoda HOM05D001075 ORTHO05D003859 1.9e-45 189.1 306 45.1
Cpa.g.sc231.10 Carica papaya HOM05D001075 ORTHO05D003859 9.6e-45 186.8 308 42.2
Glyma.11G237500 Glycine max HOM05D001075 ORTHO05D003859 2.1e-44 185.7 292 42.1
ATR0307G099 Amborella trichopoda HOM05D001075 ORTHO05D003859 2.8e-44 185.3 345 42.0
Nn1g05255 Nelumbo nucifera HOM05D001075 ORTHO05D003859 3.6e-44 184.9 310 40.0
TAR625G0559 Trochodendron aralioides HOM05D001075 ORTHO05D003859 4.8e-44 184.5 314 39.2
Ca_16549_v3 Cicer arietinum L. HOM05D001075 ORTHO05D003859 2.4e-43 182.2 294 42.5
HanXRQChr15g0485441 Helianthus annuus HOM05D001075 ORTHO05D003859 2.4e-43 182.2 353 38.0
Lalb_Chr11g0075221 Lupinus albus HOM05D001075 ORTHO05D003859 2.4e-43 182.2 290 40.3
TWI74G0010 Tripterygium wilfordii HOM05D001075 ORTHO05D003859 3.1e-43 181.8 316 41.1
MBI02_g37835_MAGBIO Magnolia biondii HOM05D001075 ORTHO05D003859 5.3e-43 181.0 325 40.0
Hund13649 Selenicereus undatus HOM05D001075 ORTHO05D003859 5.3e-43 181.0 312 39.1
TAR376G0571 Trochodendron aralioides HOM05D001075 ORTHO05D003859 5.3e-43 181.0 315 40.0
TPR.G21050 Trifolium pratense HOM05D001075 ORTHO05D003859 1.2e-42 179.9 290 41.4
QL06p050576 Quercus lobata HOM05D001075 ORTHO05D003859 1.5e-42 179.5 495 32.3
CANSAT01G1571 Cannabis sativa HOM05D001075 ORTHO05D003859 2.6e-42 178.7 516 31.6
Dinv13050 Davidia involucrata HOM05D001075 ORTHO05D003859 2.6e-42 178.7 213 46.9
AagrBONN_evm.TU.Sc2ySwM_368.3400 Anthoceros agrestis HOM05D001075 ORTHO05D003859 3.4e-42 178.3 253 44.7
Lalb_Chr23g0277271 Lupinus albus HOM05D001075 ORTHO05D003859 3.4e-42 178.3 302 42.1
THA.LOC104807709 Tarenaya hassleriana HOM05D001075 ORTHO05D003859 7.6e-42 177.2 478 32.6
VMungo1383G2292 Vigna mungo HOM05D001075 ORTHO05D003859 1.3e-41 176.4 505 33.7
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 2.2e-41 175.6 489 34.4
Glyma.18G019700 Glycine max HOM05D001075 ORTHO05D003859 2.9e-41 175.3 317 39.7
Aa31LG6G15590 Aethionema arabicum HOM05D001075 ORTHO05D003859 4.9e-41 174.5 497 32.4
Lsat_1_v5_gn_4_139660 Lactuca sativa HOM05D001075 ORTHO05D003859 4.9e-41 174.5 415 34.9
Migut.L00096 Erythranthe guttata HOM05D001075 ORTHO05D003859 8.4e-41 173.7 250 43.6
Hund13648 Selenicereus undatus HOM05D001075 ORTHO05D003859 8.4e-41 173.7 304 40.1
Sopen04g028870 Solanum pennellii HOM05D001075 ORTHO05D003859 1.1e-40 173.3 359 35.1
Lj2A557T53 Lonicera japonica HOM05D001075 ORTHO05D003859 3.2e-40 171.8 309 39.2
Dinv16322 Davidia involucrata HOM05D001075 ORTHO05D003859 5.4e-40 171.0 307 39.7
PSO210G5101 Papaver somniferum HOM05D001075 ORTHO05D003859 7.1e-40 170.6 326 39.6
Potri.005G080500 Populus trichocarpa HOM05D001075 ORTHO05D003859 7.1e-40 170.6 341 39.0
vmacro12932 Vaccinium macrocarpon HOM05D001075 ORTHO05D003859 9.3e-40 170.2 307 39.1
TWI77G0890 Tripterygium wilfordii HOM05D001075 ORTHO05D003859 1.2e-39 169.9 314 40.8
CiPaw.03G137800 Carya illinoinensis HOM05D001075 ORTHO05D003859 1.6e-39 169.5 507 31.8
THA.LOC104824862 Tarenaya hassleriana HOM05D001075 ORTHO05D003859 1.6e-39 169.5 468 32.7
Hma1.2p1_0308F.1_g120050 Hydrangea macrophylla HOM05D001075 ORTHO05D003859 2.1e-39 169.1 309 38.8
Os07g0626200 Oryza sativa ssp. japonica HOM05D001075 ORTHO05D003859 2.7e-39 168.7 307 38.8
PGSC0003DMG402027531 Solanum tuberosum HOM05D001075 ORTHO05D003859 2.7e-39 168.7 359 34.8
SGA_v2.0_scaffold34G13609 Striga asiatica HOM05D001075 ORTHO05D003859 2.7e-39 168.7 211 46.4
Atru.chr4.269 Acer truncatum HOM05D001075 ORTHO05D003859 3.5e-39 168.3 545 31.9
BraA08t34299Z Brassica rapa HOM05D001075 ORTHO05D003859 3.5e-39 168.3 469 32.6
GSVIVG01022190001 Vitis vinifera HOM05D001075 ORTHO05D003859 3.5e-39 168.3 343 37.9
Gohir.D12G094500 Gossypium hirsutum HOM05D001075 ORTHO05D003859 4.6e-39 167.9 191 50.8
Sabra05G0066000 Salix brachista HOM05D001075 ORTHO05D003859 4.6e-39 167.9 339 36.9
SEGI_35400 Sequoiadendron giganteum HOM05D001075 ORTHO05D003859 4.6e-39 167.9 674 29.4
Thecc.01G108000 Theobroma cacao HOM05D001075 ORTHO05D003859 4.6e-39 167.9 476 33.6
arahy.Tifrunner.gnm1.ann1.CPIQ3I Arachis hypogaea HOM05D001075 ORTHO05D003859 7.9e-39 167.2 476 31.1
Psat5g088640 Pisum sativum HOM05D001075 ORTHO05D003859 7.9e-39 167.2 508 32.7
Potri.007G086900 Populus trichocarpa HOM05D001075 ORTHO05D003859 1.3e-38 166.4 467 33.8
Prupe.6G178400 Prunus persica HOM05D001075 ORTHO05D003859 1.3e-38 166.4 247 42.5
TAR628G0181 Trochodendron aralioides HOM05D001075 ORTHO05D003859 1.3e-38 166.4 519 31.4
A08p23450 Brassica napus HOM05D001075 ORTHO05D003859 1.8e-38 166.0 469 32.4
CAN.G535.16 Capsicum annuum HOM05D001075 ORTHO05D003859 1.8e-38 166.0 407 34.9
Rhsim08G0008500 Rhododendron simsii HOM05D001075 ORTHO05D003859 1.8e-38 166.0 549 30.1
BraA01t00064Z Brassica rapa HOM05D001075 ORTHO05D003859 2.3e-38 165.6 511 33.1
Haze_25002 Corylus avellana HOM05D001075 ORTHO05D003859 2.3e-38 165.6 514 30.2
Sed0027467 Sechium edule HOM05D001075 ORTHO05D003859 2.3e-38 165.6 339 36.0
Dinv44736 Davidia involucrata HOM05D001075 ORTHO05D003859 3.9e-38 164.9 422 34.6
Sp7g36210 Schrenkiella parvula HOM05D001075 ORTHO05D003859 3.9e-38 164.9 448 33.3
Duzib187G0230 Durio zibethinus HOM05D001075 ORTHO05D003859 5.1e-38 164.5 437 34.3
COL.COLO4_11045 Corchorus olitorius HOM05D001075 ORTHO05D003859 6.7e-38 164.1 496 32.5
Zm00001eb018610 Zea mays HOM05D001075 ORTHO05D003859 6.7e-38 164.1 321 37.1
A01p00570 Brassica napus HOM05D001075 ORTHO05D003859 1.1e-37 163.3 512 32.8
ClCG07G009410 Citrullus lanatus HOM05D001075 ORTHO05D003859 1.1e-37 163.3 299 39.1
Eucgr.I00375 Eucalyptus grandis HOM05D001075 ORTHO05D003859 1.1e-37 163.3 535 29.9
Phvul.001G250000 Phaseolus vulgaris HOM05D001075 ORTHO05D003859 1.1e-37 163.3 504 32.3
AL7G11880 Arabidopsis lyrata HOM05D001075 ORTHO05D003859 1.5e-37 162.9 295 40.3
AT4G39680 Arabidopsis thaliana HOM05D001075 ORTHO05D003859 1.5e-37 162.9 462 34.4
Sc16g0003070 Simmondsia chinensis HOM05D001075 ORTHO05D003859 1.5e-37 162.9 452 31.2
CSS0032066 Camellia sinensis var. sinensis HOM05D001075 ORTHO05D003859 1.9e-37 162.5 368 33.7
MSTRG.15735 Avicennia marina HOM05D001075 ORTHO05D003859 3.3e-37 161.8 260 41.9
Ciclev10025009m.g Citrus clementina HOM05D001075 ORTHO05D003859 3.3e-37 161.8 393 34.1
PGR004G1876 Punica granatum HOM05D001075 ORTHO05D003859 3.3e-37 161.8 473 33.2
arahy.Tifrunner.gnm1.ann1.ELEM58 Arachis hypogaea HOM05D001075 ORTHO05D003859 4.3e-37 161.4 500 31.2
Sabra07G0071900 Salix brachista HOM05D001075 ORTHO05D003859 4.3e-37 161.4 309 38.5
PSO541G5252 Papaver somniferum HOM05D001075 ORTHO05D003859 7.4e-37 160.6 358 34.6
PSO675G1873 Papaver somniferum HOM05D001075 ORTHO05D003859 7.4e-37 160.6 311 37.9
Gohir.A12G091100 Gossypium hirsutum HOM05D001075 ORTHO05D003859 9.6e-37 160.2 191 47.6
Lsat_1_v5_gn_2_67741 Lactuca sativa HOM05D001075 ORTHO05D003859 9.6e-37 160.2 250 40.4
Gorai.008G102900 Gossypium raimondii HOM05D001075 ORTHO05D003859 1.3e-36 159.8 191 47.6
BcaNung00890 Brassica carinata HOM05D001075 ORTHO05D003859 2.1e-36 159.1 499 32.1
Lalb_Chr08g0231231 Lupinus albus HOM05D001075 ORTHO05D003859 2.1e-36 159.1 493 32.0
Oeu040742.1 Olea europaea HOM05D001075 ORTHO05D003859 2.1e-36 159.1 336 35.1
BcaC01g00310 Brassica carinata HOM05D001075 ORTHO05D003859 2.8e-36 158.7 439 33.5
C01p00700 Brassica napus HOM05D001075 ORTHO05D003859 2.8e-36 158.7 508 32.1
C03p78120 Brassica napus HOM05D001075 ORTHO05D003859 2.8e-36 158.7 439 33.5
BcaB03g12267 Brassica carinata HOM05D001075 ORTHO05D003859 3.7e-36 158.3 504 32.5
Gohir.D03G044400 Gossypium hirsutum HOM05D001075 ORTHO05D003859 3.7e-36 158.3 247 40.5
Gohir.A02G133100 Gossypium hirsutum HOM05D001075 ORTHO05D003859 4.8e-36 157.9 251 41.0
CsaV3_UNG186460 Cucumis sativus L. HOM05D001562 ORTHO05D001437 6.2e-36 157.5 310 38.4
SalBow5G5124 Salvia bowleyana HOM05D001075 ORTHO05D003859 6.2e-36 157.5 252 41.3
BolC3t20075H Brassica oleracea HOM05D001075 ORTHO05D003859 8.1e-36 157.1 443 33.0
AUR62003753 Chenopodium quinoa HOM05D001075 ORTHO05D003859 1.4e-35 156.4 503 30.4
SalBow5G4266 Salvia bowleyana HOM05D001075 ORTHO05D003859 1.4e-35 156.4 252 40.9
Sed0002631 Sechium edule HOM05D001075 ORTHO05D003859 1.4e-35 156.4 292 37.7
PGSC0003DMG401027531 Solanum tuberosum HOM05D001075 ORTHO05D003859 1.4e-35 156.4 368 33.7
unitig_32.g10692 Utricularia gibba HOM05D001075 ORTHO05D003859 1.4e-35 156.4 492 30.3
CARHR247040 Cardamine hirsuta HOM05D001075 ORTHO05D003859 1.8e-35 156.0 497 30.4
HanXRQChr15g0471691 Helianthus annuus HOM05D001075 ORTHO05D003859 1.8e-35 156.0 275 38.5
Rhsim10G0156100 Rhododendron simsii HOM05D001075 ORTHO05D003859 1.8e-35 156.0 314 36.6
FAN28G0934 Fragaria x ananassa HOM05D001075 ORTHO05D003859 2.4e-35 155.6 505 29.9
Lj4g0008481 Lotus japonicus HOM05D001075 ORTHO05D003859 2.4e-35 155.6 516 30.6
PSO447G0249 Papaver somniferum HOM05D001075 ORTHO05D003859 3.1e-35 155.2 547 30.3
Gohir.D03G044500 Gossypium hirsutum HOM05D001075 ORTHO05D003859 4.0e-35 154.8 255 39.6
Lj6g0021202 Lotus japonicus HOM05D001075 ORTHO05D003859 4.0e-35 154.8 515 29.9
Manes.13G077700 Manihot esculenta HOM05D001075 ORTHO05D003859 4.0e-35 154.8 515 31.8
Gorai.003G045500 Gossypium raimondii HOM05D001075 ORTHO05D003859 6.9e-35 154.1 239 40.6
Nitab4.5_0006636g0030 Nicotiana tabacum HOM05D001075 ORTHO05D003859 6.9e-35 154.1 278 38.8
PSO541G0363 Papaver somniferum HOM05D001075 ORTHO05D003859 6.9e-35 154.1 306 35.0
HPP92_010948 Vanilla planifolia HOM05D001075 ORTHO05D003859 6.9e-35 154.1 449 31.8
BolC1t00073H Brassica oleracea HOM05D001075 ORTHO05D003859 1.2e-34 153.3 490 31.0
Manes.13G090100 Manihot esculenta HOM05D001075 ORTHO05D003859 2.0e-34 152.5 438 32.4
Oeu024564.1 Olea europaea HOM05D001075 ORTHO05D003859 2.0e-34 152.5 711 29.5
Carub.0007s0156 Capsella rubella HOM05D001075 ORTHO05D003859 2.6e-34 152.1 446 31.2
MELO3C017577.2 Cucumis melo HOM05D001075 ORTHO05D003859 2.6e-34 152.1 416 35.1
Duzib147G1252 Durio zibethinus HOM05D001075 ORTHO05D003859 2.6e-34 152.1 462 31.0
ECA232G4146 Erigeron canadensis HOM05D001075 ORTHO05D003859 2.6e-34 152.1 486 29.8
Cfa002724 Carpinus fangiana HOM05D001075 ORTHO05D003859 3.4e-34 151.8 516 28.9
Gohir.A02G133000 Gossypium hirsutum HOM05D001075 ORTHO05D003859 3.4e-34 151.8 351 33.9
Gorai.N021200 Gossypium raimondii HOM05D001075 ORTHO05D003859 3.4e-34 151.8 361 33.5
Medtr3g087830 Medicago truncatula HOM05D001075 ORTHO05D003859 3.4e-34 151.8 505 30.9
Nn5g28992 Nelumbo nucifera HOM05D001075 ORTHO05D003859 3.4e-34 151.8 648 28.7
arahy.Tifrunner.gnm1.ann1.D1K6PT Arachis hypogaea HOM05D001075 ORTHO05D003859 5.8e-34 151.0 633 27.0
Actinidia20419 Actinidia chinensis HOM05D001075 ORTHO05D003859 1.0e-33 150.2 621 29.5
arahy.Tifrunner.gnm1.ann1.WI3M6V Arachis hypogaea HOM05D001075 ORTHO05D003859 1.3e-33 149.8 619 27.8
Cc00_g21700 Coffea canephora HOM05D001075 ORTHO05D003859 1.7e-33 149.4 619 28.4
Nitab4.5_0000214g0210 Nicotiana tabacum HOM05D001075 ORTHO05D003859 1.7e-33 149.4 390 34.9
DCAR_011493 Daucus carota HOM05D001075 ORTHO05D003859 2.9e-33 148.7 574 30.3
Thhalv10024660m.g Eutrema salsugineum HOM05D001075 ORTHO05D003859 2.9e-33 148.7 444 32.0
Solyc04g072670.4 Solanum lycopersicum HOM05D001075 ORTHO05D003859 2.9e-33 148.7 607 28.3
CBR_g12758 Chara braunii HOM05D001075 ORTHO05D003859 3.8e-33 148.3 204 43.6
Os03g0383800 Oryza sativa ssp. japonica HOM05D001075 ORTHO05D003859 4.9e-33 147.9 464 31.0
AUR62002042 Chenopodium quinoa HOM05D001075 ORTHO05D003859 6.5e-33 147.5 558 29.4
Aqoxy6G00535_Aqoxy6G00536 Aquilegia oxysepala HOM05D001075 ORTHO05D003859 8.4e-33 147.1 591 29.8
FAN26G1591 Fragaria x ananassa HOM05D001075 ORTHO05D003859 8.4e-33 147.1 490 29.2
Ah.02g122880 Amaranthus hybridus HOM05D001075 ORTHO05D003859 1.9e-32 146.0 548 29.4
CDE10G0491 Ceratophyllum demersum HOM05D001075 ORTHO05D003859 1.9e-32 146.0 541 29.9
Peaxi162Scf00168g00410 Petunia axillaris HOM05D001075 ORTHO05D003859 1.9e-32 146.0 573 27.2
SHI11631 Sapria himalayana HOM05D001075 ORTHO05D003859 1.9e-32 146.0 356 34.8
Zm00001eb392330 Zea mays HOM05D001075 ORTHO05D003859 1.9e-32 146.0 359 33.1
Peaxi162Scf00168g00311 Petunia axillaris HOM05D001075 ORTHO05D003859 2.5e-32 145.6 613 28.4
ECA238G4732 Erigeron canadensis HOM05D001075 ORTHO05D003859 4.2e-32 144.8 544 27.2
HPP92_019110 Vanilla planifolia HOM05D001075 ORTHO05D003859 4.2e-32 144.8 509 30.5
MD15G1329800 Malus domestica HOM05D001075 ORTHO05D003859 5.5e-32 144.4 472 29.0
CAN.G535.15 Capsicum annuum HOM05D001075 ORTHO05D003859 1.2e-31 143.3 578 27.9
MBI19_g28106_MAGBIO Magnolia biondii HOM05D001075 ORTHO05D003859 1.2e-31 143.3 437 32.3
Dinv21954 Davidia involucrata HOM05D001075 ORTHO05D003859 1.0e-30 140.2 569 27.6
Zm00001eb327960 Zea mays HOM05D001075 ORTHO05D003859 1.0e-30 140.2 516 30.2
CiPaw.04G095100 Carya illinoinensis HOM05D001075 ORTHO05D003859 2.3e-30 139.0 225 39.6
FAN23G2259 Fragaria x ananassa HOM05D001075 ORTHO05D003859 3.0e-30 138.7 515 29.5
Medtr8g091530 Medicago truncatula HOM05D001075 ORTHO05D003859 3.9e-30 138.3 587 28.3
FAN19G1171 Fragaria x ananassa HOM05D001075 ORTHO05D003859 6.7e-30 137.5 517 29.2
unitig_88.g27730 Utricularia gibba HOM05D001075 ORTHO05D003859 8.7e-30 137.1 213 39.9
CsaV3_4G004840 Cucumis sativus L. HOM05D001075 ORTHO05D003859 1.5e-29 136.3 305 35.7
HanXRQChr14g0445991 Helianthus annuus HOM05D001075 ORTHO05D003859 3.3e-29 135.2 551 28.1
Nitab4.5_0006636g0020 Nicotiana tabacum HOM05D001075 ORTHO05D003859 4.3e-29 134.8 512 28.5
DCAR_001011 Daucus carota HOM05D001075 ORTHO05D003859 2.1e-28 132.5 616 28.6
CDE10G1172 Ceratophyllum demersum HOM05D001075 ORTHO05D003859 4.8e-28 131.3 553 27.8
SGA_v2.0_scaffold47G17746 Striga asiatica HOM05D001075 ORTHO05D003859 8.2e-28 130.6 158 46.8
GSVIVG01008977001 Vitis vinifera HOM05D001075 ORTHO05D003859 2.6e-26 125.6 393 30.8
Nitab4.5_0000214g0200 Nicotiana tabacum HOM05D001075 ORTHO05D003859 4.5e-26 124.8 527 29.2
TPR.G2172 Trifolium pratense HOM05D001075 ORTHO05D003859 4.5e-26 124.8 542 27.1
RcHm_v2.0_Chr2g0115611 Rosa chinensis HOM05D001075 ORTHO05D003859 5.8e-26 124.4 460 28.7
PSO675G4532 Papaver somniferum HOM05D001075 ORTHO05D003859 7.6e-26 124.0 441 29.3
EL10Ac6g15062 Beta vulgaris HOM05D001075 ORTHO05D003859 1.7e-25 122.9 540 28.0
vmacro18619 Vaccinium macrocarpon HOM05D001075 ORTHO05D003859 5.0e-25 121.3 235 38.3
ATR0829G029 Amborella trichopoda HOM05D001075 ORTHO05D003859 1.9e-24 119.4 121 51.2
CiPaw.04G094000 Carya illinoinensis HOM05D001075 ORTHO05D003859 2.7e-23 115.5 523 25.6
TAR381G0933 Trochodendron aralioides HOM05D001075 ORTHO05D003859 6.1e-23 114.4 370 28.9
BcaNung00888 Brassica carinata HOM05D001075 ORTHO05D003859 5.1e-22 111.3 305 33.8
Psat7g089280 Pisum sativum HOM05D001075 ORTHO05D003859 6.7e-22 110.9 578 25.6
Lj2C557T2 Lonicera japonica HOM05D001075 ORTHO05D003859 3.3e-21 108.6 469 27.1
Oeu002183.3 Olea europaea HOM05D001075 ORTHO05D003859 9.0e-19 100.5 639 26.1
ECA238G0951 Erigeron canadensis HOM05D001075 ORTHO05D003859 1.2e-18 100.1 622 24.4
BcaNung05548 Brassica carinata HOM05D001075 ORTHO05D003859 7.2e-16 90.9 296 33.1
Cc10_g05910 Coffea canephora HOM05D001075 ORTHO05D003859 3.6e-15 88.6 137 43.1
Sopen04g028880 Solanum pennellii HOM05D001075 ORTHO05D003859 6.1e-15 87.8 170 39.4
Actinidia32981 Actinidia chinensis HOM05D001075 ORTHO05D003859 1.5e-13 83.2 144 38.9


User provided reference genes

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