Gene: Lsat_1_v5_gn_4_139660

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_139660
  • Transcript Identifier Lsat_1_v5_gn_4_139660.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 272544120-272546115 : negative

Gene Family Information

  • ID HOM05D001075
  • #Genes/#Species 570/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_139660.v5
  • pacid 38929027

Descriptions

  • Description K12875 - apoptotic chromatin condensation inducer in the nucleus (ACIN1, ACINUS)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001075

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G39680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032552 Acin1, RNSP1-SAP18 binding (RSB) motif
IPR003034 SAP domain
IPR035979 RNA-binding domain superfamily
IPR036361 SAP domain superfamily
IPR034257 Acinus, RNA recognition motif
Mapman id Description
17.3.1.2.4 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component ACINUS