Gene: Sopen04g028870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g028870
  • Transcript Identifier Sopen04g028870.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 70339525-70343322 : negative

Gene Family Information

  • ID HOM05D001075
  • #Genes/#Species 570/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g028870.1

Descriptions

  • Description SAP domain-containing protein | FUNCTIONS IN: DNA binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding SAP
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001075

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G39680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036361 SAP domain superfamily
IPR032552 Acin1, RNSP1-SAP18 binding (RSB) motif
IPR034257 Acinus, RNA recognition motif
IPR035979 RNA-binding domain superfamily
IPR003034 SAP domain
Mapman id Description
17.3.1.2.4 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component ACINUS