Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001075', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001075' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001075' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001075' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001075' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001075', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001075' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001075' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001075' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001075' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001075', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001075' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001075' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001075' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001075' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001075', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001075' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001075', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '570', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' ) ), 'genes' => array( 'A01p00570' => 'bna', 'A01p35720' => 'bna', 'A03p40800' => 'bna', 'A05p30880' => 'bna', 'A07p27770' => 'bna', 'A07p43170' => 'bna', 'A08p23450' => 'bna', 'Aa31LG4G8010' => 'aar', 'Aa31LG6G15590' => 'aar', 'Aa31LG6G8990' => 'aar', 'Aa31LG8G5550' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2473' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3400' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.431' => 'aag', 'Actinidia06363' => 'ach', 'Actinidia10295' => 'ach', 'Actinidia12856' => 'ach', 'Actinidia20419' => 'ach', 'Actinidia22474' => 'ach', 'Actinidia28878' => 'ach', 'Actinidia29574' => 'ach', 'Actinidia30746' => 'ach', 'Actinidia32981' => 'ach', 'Actinidia33160' => 'ach', 'Ah.01g014270' => 'amhyb', 'Ah.02g122880' => 'amhyb', 'Ah.16g108910' => 'amhyb', 'AL1G50900' => 'aly', 'AL2G38210' => 'aly', 'AL3G32090' => 'aly', 'AL6G43030' => 'aly', 'AL7G11880' => 'aly', 'AL7G49560' => 'aly', 'AL9U11850' => 'aly', 'Aqoxy6G00534' => 'aox', 'Aqoxy6G00535_Aqoxy6G00536' => 'aox', 'Aqoxy6G02585' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5Q9WIJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69CWWR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIMT38' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CPIQ3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D1K6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ELEM58' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2R3EE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LY739B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MY1P7G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T960E2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WD7W4L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WI3M6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YRJ59F' => 'arhy', 'AT1G36240' => 'ath', 'AT1G77940' => 'ath', 'AT3G18740' => 'ath', 'AT4G39680' => 'ath', 'ATR0118G020' => 'atr', 'ATR0307G099' => 'atr', 'ATR0307G129' => 'atr', 'ATR0564G189' => 'atr', 'ATR0564G453' => 'atr', 'ATR0584G055' => 'atr', 'ATR0584G106' => 'atr', 'ATR0680G227' => 'atr', 'ATR0829G029' => 'atr', 'Atru.chr10.1463' => 'acertr', 'Atru.chr11.35' => 'acertr', 'Atru.chr3.3009' => 'acertr', 'Atru.chr4.269' => 'acertr', 'Atru.chr4.274' => 'acertr', 'AUR62001613' => 'cqu', 'AUR62002042' => 'cqu', 'AUR62003753' => 'cqu', 'AUR62020167' => 'cqu', 'BcaB01g02237' => 'bca', 'BcaB02g07140' => 'bca', 'BcaB03g12267' => 'bca', 'BcaB03g15911' => 'bca', 'BcaB03g15968' => 'bca', 'BcaB04g19001' => 'bca', 'BcaB04g20753' => 'bca', 'BcaB06g25925' => 'bca', 'BcaB08g35023' => 'bca', 'BcaC01g00310' => 'bca', 'BcaC01g03678' => 'bca', 'BcaC03g15779' => 'bca', 'BcaC05g28578' => 'bca', 'BcaC08g45442' => 'bca', 'BcaC09g48830' => 'bca', 'BcaNung00888' => 'bca', 'BcaNung00890' => 'bca', 'BcaNung05548' => 'bca', 'BolC1t00073H' => 'bol', 'BolC1t04513H' => 'bol', 'BolC2t09538H' => 'bol', 'BolC3t17267H' => 'bol', 'BolC3t20075H' => 'bol', 'BolC5t33411H' => 'bol', 'BolC6t35938H' => 'bol', 'BolC6t38237H' => 'bol', 'BolC6t40208H' => 'bol', 'BraA01t00064Z' => 'bra', 'BraA01t03654Z' => 'bra', 'BraA03t13238Z' => 'bra', 'BraA05t21930Z' => 'bra', 'BraA07t30416Z' => 'bra', 'BraA07t31839Z' => 'bra', 'BraA08t34299Z' => 'bra', 'C01p00700' => 'bna', 'C01p45470' => 'bna', 'C02p35220' => 'bna', 'C03p49690' => 'bna', 'C03p78120' => 'bna', 'C05p46810' => 'bna', 'C06p30720' => 'bna', 'C06p51860' => 'bna', 'CAN.G201.47' => 'can', 'CAN.G535.14' => 'can', 'CAN.G535.15' => 'can', 'CAN.G535.16' => 'can', 'CAN.G864.9' => 'can', 'CANSAT01G1571' => 'cansat', 'CANSAT01G2830' => 'cansat', 'CANSAT54G1515' => 'cansat', 'CARHR034950' => 'chi', 'CARHR071420' => 'chi', 'CARHR094130' => 'chi', 'CARHR247040' => 'chi', 'Carub.0002s2484' => 'cru', 'Carub.0003s1852' => 'cru', 'Carub.0003s1853' => 'cru', 'Carub.0007s0156' => 'cru', 'Ca_03650_v3' => 'car', 'Ca_07085_v3' => 'car', 'Ca_16549_v3' => 'car', 'Ca_17708_v3' => 'car', 'CBR_g12758' => 'cbr', 'CBR_g29661' => 'cbr', 'Cc00_g21700' => 'ccan', 'Cc00_g24430' => 'ccan', 'Cc00_g29380' => 'ccan', 'Cc01_g07570' => 'ccan', 'Cc10_g05910' => 'ccan', 'CDE02G0523' => 'cde', 'CDE04G1064' => 'cde', 'CDE10G0491' => 'cde', 'CDE10G1172' => 'cde', 'Cfa002724' => 'cfa', 'Cfa010257' => 'cfa', 'Cfa021630' => 'cfa', 'Ciclev10006263m.g' => 'ccl', 'Ciclev10025009m.g' => 'ccl', 'Ciclev10026806m.g' => 'ccl', 'Ciclev10026947m.g' => 'ccl', 'CiPaw.03G137800' => 'cil', 'CiPaw.04G094000' => 'cil', 'CiPaw.04G095100' => 'cil', 'CiPaw.05G232300' => 'cil', 'CiPaw.06G022700' => 'cil', 'CiPaw.13G119900' => 'cil', 'ClCG03G008920' => 'cla', 'ClCG03G014160' => 'cla', 'ClCG07G009410' => 'cla', 'COL.COLO4_11045' => 'col', 'COL.COLO4_18367' => 'col', 'Cpa.g.sc2.435' => 'cpa', 'Cpa.g.sc231.10' => 'cpa', 'Cpa.g.sc46.30' => 'cpa', 'Cre03.g204950' => 'cre', 'Cre10.g420750' => 'cre', 'CsaV3_1G042100' => 'csa', 'CsaV3_4G004840' => 'csa', 'CsaV3_5G023800' => 'csa', 'CsaV3_UNG186470' => 'csa', 'CSS0032066' => 'camsi', 'CSS0039699' => 'camsi', 'DCAR_001011' => 'dca', 'DCAR_002034' => 'dca', 'DCAR_002038' => 'dca', 'DCAR_011493' => 'dca', 'Dinv05233' => 'din', 'Dinv13049' => 'din', 'Dinv13050' => 'din', 'Dinv13051' => 'din', 'Dinv16322' => 'din', 'Dinv21954' => 'din', 'Dinv44736' => 'din', 'Duzib147G1252' => 'dzi', 'Duzib168G1371' => 'dzi', 'Duzib170G0258' => 'dzi', 'Duzib187G0230' => 'dzi', 'Duzib187G1142' => 'dzi', 'Duzib264G1232' => 'dzi', 'ECA232G0960' => 'eca', 'ECA232G4146' => 'eca', 'ECA233G3724' => 'eca', 'ECA238G0951' => 'eca', 'ECA238G4732' => 'eca', 'ECA240G1355' => 'eca', 'EL10Ac6g15062' => 'bvu', 'EL10Ac7g16219' => 'bvu', 'Eucgr.B03786' => 'egr', 'Eucgr.I00375' => 'egr', 'Eucgr.J00625' => 'egr', 'FAN01G3169' => 'fan', 'FAN03G3277' => 'fan', 'FAN04G1165' => 'fan', 'FAN04G2051' => 'fan', 'FAN04G2922' => 'fan', 'FAN06G0405' => 'fan', 'FAN06G2162' => 'fan', 'FAN08G1109' => 'fan', 'FAN08G1620' => 'fan', 'FAN08G1935' => 'fan', 'FAN08G2353' => 'fan', 'FAN10G1094' => 'fan', 'FAN13G0462' => 'fan', 'FAN18G2265' => 'fan', 'FAN18G3241' => 'fan', 'FAN18G3619' => 'fan', 'FAN19G1171' => 'fan', 'FAN23G2259' => 'fan', 'FAN26G1591' => 'fan', 'FAN28G0934' => 'fan', 'FvH4_1g21740' => 'fve', 'FvH4_5g27940' => 'fve', 'FvH4_5g28040' => 'fve', 'FvH4_5g38130' => 'fve', 'FvH4_7g04710' => 'fve', 'Glyma.02G002300' => 'gma', 'Glyma.08G257100' => 'gma', 'Glyma.10G002400' => 'gma', 'Glyma.11G237500' => 'gma', 'Glyma.18G019700' => 'gma', 'Glyma.18G281200' => 'gma', 'Gohir.A02G133000' => 'ghi', 'Gohir.A02G133100' => 'ghi', 'Gohir.A03G035100' => 'ghi', 'Gohir.A05G101100' => 'ghi', 'Gohir.A07G113333' => 'ghi', 'Gohir.A08G196400' => 'ghi', 'Gohir.A11G053100' => 'ghi', 'Gohir.A11G198850' => 'ghi', 'Gohir.A12G091100' => 'ghi', 'Gohir.D02G066900' => 'ghi', 'Gohir.D03G006000' => 'ghi', 'Gohir.D03G044400' => 'ghi', 'Gohir.D03G044500' => 'ghi', 'Gohir.D03G124501' => 'ghi', 'Gohir.D03G133100' => 'ghi', 'Gohir.D04G162366' => 'ghi', 'Gohir.D05G100900' => 'ghi', 'Gohir.D05G255200' => 'ghi', 'Gohir.D06G056266' => 'ghi', 'Gohir.D08G135500' => 'ghi', 'Gohir.D08G213500' => 'ghi', 'Gohir.D11G056600' => 'ghi', 'Gohir.D11G225300' => 'ghi', 'Gohir.D12G036733' => 'ghi', 'Gohir.D12G094500' => 'ghi', 'Gohir.D12G094900' => 'ghi', 'Gohir.D13G087050' => 'ghi', 'Gorai.001G171600' => 'gra', 'Gorai.003G045500' => 'gra', 'Gorai.003G140200' => 'gra', 'Gorai.004G138700' => 'gra', 'Gorai.004G227600' => 'gra', 'Gorai.006G035600' => 'gra', 'Gorai.007G061800' => 'gra', 'Gorai.007G242900' => 'gra', 'Gorai.008G102900' => 'gra', 'Gorai.008G148800' => 'gra', 'Gorai.009G105000' => 'gra', 'Gorai.011G185200' => 'gra', 'Gorai.N021100' => 'gra', 'Gorai.N021200' => 'gra', 'GSVIVG01008975001' => 'vvi', 'GSVIVG01008977001' => 'vvi', 'GSVIVG01022190001' => 'vvi', 'GSVIVG01022191001' => 'vvi', 'GSVIVG01032102001' => 'vvi', 'HanXRQChr03g0089331' => 'han', 'HanXRQChr13g0419951' => 'han', 'HanXRQChr14g0445991' => 'han', 'HanXRQChr15g0471691' => 'han', 'HanXRQChr15g0485441' => 'han', 'HanXRQChr15g0497041' => 'han', 'HanXRQChr16g0499761' => 'han', 'Haze_00562' => 'cav', 'Haze_23666' => 'cav', 'Haze_25002' => 'cav', 'Haze_27659' => 'cav', 'Hma1.2p1_0218F.1_g092620' => 'hma', 'Hma1.2p1_0308F.1_g120050' => 'hma', 'HPP92_007623' => 'vpl', 'HPP92_010948' => 'vpl', 'HPP92_019110' => 'vpl', 'HPP92_025888' => 'vpl', 'Hund13648' => 'sun', 'Hund13649' => 'sun', 'Hund18831' => 'sun', 'Hund20983' => 'sun', 'Lalb_Chr02g0158311' => 'lal', 'Lalb_Chr04g0258131' => 'lal', 'Lalb_Chr06g0174651' => 'lal', 'Lalb_Chr08g0231231' => 'lal', 'Lalb_Chr11g0075221' => 'lal', 'Lalb_Chr17g0336491' => 'lal', 'Lalb_Chr21g0317881' => 'lal', 'Lalb_Chr23g0277271' => 'lal', 'Lj1g0023244' => 'lja', 'Lj2A557T53' => 'lonja', 'Lj2C557T2' => 'lonja', 'Lj2g0014472' => 'lja', 'Lj4A712T14' => 'lonja', 'Lj4g0004625' => 'lja', 'Lj4g0008481' => 'lja', 'Lj4g0017161' => 'lja', 'Lj6g0021202' => 'lja', 'Lsat_1_v5_gn_0_9581' => 'lsa', 'Lsat_1_v5_gn_2_67741' => 'lsa', 'Lsat_1_v5_gn_4_139660' => 'lsa', 'Lsat_1_v5_gn_6_95701' => 'lsa', 'Lsat_1_v5_gn_8_3821' => 'lsa', 'Manes.04G055200' => 'mes', 'Manes.11G112000' => 'mes', 'Manes.12G139100' => 'mes', 'Manes.13G077700' => 'mes', 'Manes.13G090100' => 'mes', 'Mapoly0042s0123' => 'mpo', 'Mapoly0099s0042' => 'mpo', 'Mapoly0111s0033' => 'mpo', 'MBI02_g37835_MAGBIO' => 'mbi', 'MBI19_g28106_MAGBIO' => 'mbi', 'MBI19_g28107_MAGBIO' => 'mbi', 'MCO05G205' => 'mco', 'MD01G1022700' => 'mdo', 'MD08G1176600' => 'mdo', 'MD15G1329800' => 'mdo', 'MD15G1363000' => 'mdo', 'MD15G1431500' => 'mdo', 'Medtr0024s0220' => 'mtr', 'Medtr3g087830' => 'mtr', 'Medtr5g088740' => 'mtr', 'Medtr7g021030' => 'mtr', 'Medtr8g091530' => 'mtr', 'MELO3C015628.2' => 'cme', 'MELO3C017577.2' => 'cme', 'MELO3C022815.2' => 'cme', 'MELO3C028583.2' => 'cme', 'Migut.C00185' => 'egut', 'Migut.H02395' => 'egut', 'Migut.L00095' => 'egut', 'Migut.L00096' => 'egut', 'Migut.N02920' => 'egut', 'MSTRG.15735' => 'ama', 'MSTRG.15736' => 'ama', 'MSTRG.22131' => 'ama', 'MSTRG.23327' => 'ama', 'MSTRG.2546' => 'ama', 'MSTRG.3798' => 'ama', 'Nitab4.5_0000214g0200' => 'nta', 'Nitab4.5_0000214g0210' => 'nta', 'Nitab4.5_0000271g0120' => 'nta', 'Nitab4.5_0000425g0050' => 'nta', 'Nitab4.5_0000428g0120' => 'nta', 'Nitab4.5_0000518g0020' => 'nta', 'Nitab4.5_0000639g0020' => 'nta', 'Nitab4.5_0001183g0040' => 'nta', 'Nitab4.5_0002184g0090' => 'nta', 'Nitab4.5_0002300g0130' => 'nta', 'Nitab4.5_0002534g0080' => 'nta', 'Nitab4.5_0006636g0020' => 'nta', 'Nitab4.5_0006636g0030' => 'nta', 'Nitab4.5_0006678g0020' => 'nta', 'Nitab4.5_0011179g0010' => 'nta', 'Nitab4.5_0012275g0010' => 'nta', 'Nn1g05253' => 'nnu', 'Nn1g05255' => 'nnu', 'Nn1g05261' => 'nnu', 'Nn5g28992' => 'nnu', 'Nn5g28994' => 'nnu', 'Oeu002183.3' => 'oeu', 'Oeu002185.2' => 'oeu', 'Oeu024564.1' => 'oeu', 'Oeu028392.1' => 'oeu', 'Oeu040742.1' => 'oeu', 'Oeu040743.1' => 'oeu', 'Oeu045766.1' => 'oeu', 'Oeu045779.1' => 'oeu', 'Oeu046384.1' => 'oeu', 'Oeu061473.1' => 'oeu', 'Os01g0276000' => 'osa', 'Os01g0812800' => 'osa', 'Os03g0383800' => 'osa', 'Os05g0490100' => 'osa', 'Os07g0626200' => 'osa', 'Peaxi162Scf00007g00223' => 'pax', 'Peaxi162Scf00168g00049' => 'pax', 'Peaxi162Scf00168g00311' => 'pax', 'Peaxi162Scf00168g00410' => 'pax', 'Peaxi162Scf00217g00910' => 'pax', 'Peaxi162Scf00342g00025' => 'pax', 'Peaxi162Scf00526g00521' => 'pax', 'PGR004G1876' => 'pgr', 'PGR083G1954' => 'pgr', 'PGR119G0410' => 'pgr', 'PGSC0003DMG400018701' => 'stu', 'PGSC0003DMG400027532' => 'stu', 'PGSC0003DMG401027531' => 'stu', 'PGSC0003DMG402027531' => 'stu', 'Phvul.001G250000' => 'pvu', 'Phvul.004G063700' => 'pvu', 'Phvul.008G019800' => 'pvu', 'Potri.004G196500' => 'ptr', 'Potri.005G080500' => 'ptr', 'Potri.005G080700' => 'ptr', 'Potri.007G086800' => 'ptr', 'Potri.007G086900' => 'ptr', 'Potri.009G158700' => 'ptr', 'Pp3c12_9290' => 'ppa', 'Pp3c15_22110' => 'ppa', 'Pp3c15_22112' => 'ppa', 'Pp3c16_10400' => 'ppa', 'Pp3c25_9320' => 'ppa', 'Pp3c3_23900' => 'ppa', 'Pp3c4_15480' => 'ppa', 'Pp3c5_4330' => 'ppa', 'Pp3c9_18590' => 'ppa', 'PRCOL_00003497' => 'pco', 'Prupe.1G096700' => 'ppe', 'Prupe.1G511000' => 'ppe', 'Prupe.6G178400' => 'ppe', 'Psat1g080160' => 'psa', 'Psat3g189400' => 'psa', 'Psat5g088640' => 'psa', 'Psat5g242960' => 'psa', 'Psat7g054640' => 'psa', 'Psat7g089280' => 'psa', 'PSO017G4409' => 'pso', 'PSO063G7174' => 'pso', 'PSO170G1994' => 'pso', 'PSO210G0673' => 'pso', 'PSO210G3499' => 'pso', 'PSO210G3974' => 'pso', 'PSO210G5101' => 'pso', 'PSO447G0086' => 'pso', 'PSO447G0249' => 'pso', 'PSO455G0064' => 'pso', 'PSO541G0363' => 'pso', 'PSO541G5252' => 'pso', 'PSO675G0035' => 'pso', 'PSO675G1873' => 'pso', 'PSO675G4532' => 'pso', 'PSO832G4507' => 'pso', 'QL01p020405' => 'qlo', 'QL06p050576' => 'qlo', 'QL06p050582' => 'qlo', 'QL12p035773' => 'qlo', 'RcHm_v2.0_Chr2g0115611' => 'rch', 'RcHm_v2.0_Chr4g0416121' => 'rch', 'RcHm_v2.0_Chr6g0275411' => 'rch', 'RcHm_v2.0_Chr6g0301591' => 'rch', 'RcHm_v2.0_Chr7g0240111' => 'rch', 'Rhsim01G0196600' => 'rsi', 'Rhsim08G0008500' => 'rsi', 'Rhsim10G0156100' => 'rsi', 'Sabra04G0133200' => 'sbr', 'Sabra05G0066000' => 'sbr', 'Sabra07G0071800' => 'sbr', 'Sabra07G0071900' => 'sbr', 'Sabra09G0124200' => 'sbr', 'SalBow3G3084' => 'sbo', 'SalBow5G1253' => 'sbo', 'SalBow5G4266' => 'sbo', 'SalBow5G4824' => 'sbo', 'SalBow5G5124' => 'sbo', 'SalBow6G1521' => 'sbo', 'SalBow6G4867' => 'sbo', 'SalBow7G0122' => 'sbo', 'Sc06g0008510' => 'sci', 'Sc12g0000540' => 'sci', 'Sc16g0003070' => 'sci', 'Sc21g0006510' => 'sci', 'Sed0000989' => 'sed', 'Sed0002631' => 'sed', 'Sed0003299' => 'sed', 'Sed0004526' => 'sed', 'Sed0005319' => 'sed', 'Sed0018860' => 'sed', 'Sed0024545' => 'sed', 'Sed0027344' => 'sed', 'Sed0027467' => 'sed', 'SEGI_11271' => 'sgi', 'SEGI_20924' => 'sgi', 'SEGI_23066' => 'sgi', 'SEGI_35400' => 'sgi', 'SEGI_37759' => 'sgi', 'SGA_v2.0_scaffold34G13609' => 'sas', 'SGA_v2.0_scaffold47G17746' => 'sas', 'SGA_v2.0_scaffold551G52875' => 'sas', 'SHI11631' => 'shi', 'SMO139G0084' => 'smo', 'SMO271G0168' => 'smo', 'Solyc01g009100.4' => 'sly', 'Solyc04g072660.4' => 'sly', 'Solyc04g072670.4' => 'sly', 'Solyc04g072680.2' => 'sly', 'Solyc11g071490.2' => 'sly', 'Sopen01g004590' => 'spe', 'Sopen04g028860' => 'spe', 'Sopen04g028870' => 'spe', 'Sopen04g028880' => 'spe', 'Sopen11g029180' => 'spe', 'Sp5g33090' => 'spa', 'Sp7g36210' => 'spa', 'TAR376G0571' => 'tar', 'TAR381G0933' => 'tar', 'TAR623G0545' => 'tar', 'TAR625G0559' => 'tar', 'TAR625G1431' => 'tar', 'TAR628G0181' => 'tar', 'TAR628G1612' => 'tar', 'TAR633G1055' => 'tar', 'TAR636G2250' => 'tar', 'THA.LOC104800167' => 'tha', 'THA.LOC104801889' => 'tha', 'THA.LOC104806800' => 'tha', 'THA.LOC104807709' => 'tha', 'THA.LOC104809705' => 'tha', 'THA.LOC104813128' => 'tha', 'THA.LOC104816913' => 'tha', 'THA.LOC104824862' => 'tha', 'Thecc.01G108000' => 'tca', 'Thecc.01G108600' => 'tca', 'Thecc.09G337300' => 'tca', 'Thhalv10019341m.g' => 'esa', 'Thhalv10021799m.g' => 'esa', 'Thhalv10021801m.g' => 'esa', 'Thhalv10024660m.g' => 'esa', 'TPR.G21050' => 'tpr', 'TPR.G2172' => 'tpr', 'TPR.G2923' => 'tpr', 'TPR.G32443' => 'tpr', 'TPR.G40794' => 'tpr', 'TWI12G0124' => 'twi', 'TWI36G0836' => 'twi', 'TWI56G0124' => 'twi', 'TWI74G0010' => 'twi', 'TWI77G0720' => 'twi', 'TWI77G0890' => 'twi', 'unitig_21.g20586' => 'ugi', 'unitig_32.g10692' => 'ugi', 'unitig_578.g16211' => 'ugi', 'unitig_736.g22573' => 'ugi', 'unitig_8.g4832' => 'ugi', 'unitig_8.g4833' => 'ugi', 'unitig_88.g27730' => 'ugi', 'vmacro00355' => 'vma', 'vmacro12932' => 'vma', 'vmacro14289' => 'vma', 'vmacro18619' => 'vma', 'vmacro21224' => 'vma', 'VMungo0464G1705' => 'vmu', 'VMungo1383G2292' => 'vmu', 'VMungo1383G3254' => 'vmu', 'Zm00001eb018610' => 'zma', 'Zm00001eb227660' => 'zma', 'Zm00001eb291240' => 'zma', 'Zm00001eb327960' => 'zma', 'Zm00001eb332790' => 'zma', 'Zm00001eb392330' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001075' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001075' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001075' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001075' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151