Gene: SGA_v2.0_scaffold34G13609

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold34G13609
  • Transcript Identifier SGA_v2.0_scaffold34T13609
  • Gene Type Coding gene
  • Location scaffold34 : 265616-272274 : positive

Gene Family Information

  • ID HOM05D001075
  • #Genes/#Species 570/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product 60S ribosomal protein L30
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT3G18740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001075
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT1G36240
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G36240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G18740
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G18740
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G36240
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT1G36240
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G18740
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G18740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032552 Acin1, RNSP1-SAP18 binding (RSB) motif
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 50S ribosomal protein L30e-like
IPR035979 RNA-binding domain superfamily
IPR034257 Acinus, RNA recognition motif
IPR003034 SAP domain
IPR036361 SAP domain superfamily
Mapman id Description
17.1.2.1.31 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL30
17.3.1.2.4 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component ACINUS