Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20322 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 6.0e-127 457.6 244 100.0
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 8.7e-94 347.4 233 81.1
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 4.8e-92 341.7 233 79.0
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 8.2e-92 340.9 232 81.0
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 2.4e-91 339.3 233 79.4
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 1.2e-90 337.0 233 79.0
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 2.0e-90 336.3 233 77.7
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 3.4e-90 335.5 233 78.1
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.4e-90 335.5 233 78.5
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 3.8e-89 332.0 233 76.8
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 1.1e-88 330.5 233 76.4
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 1.4e-88 330.1 233 76.8
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 1.9e-88 329.7 233 77.3
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 4.2e-88 328.6 232 76.7
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 9.3e-88 327.4 233 76.4
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 9.3e-88 327.4 233 76.0
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 1.2e-87 327.0 233 76.0
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.6e-87 326.6 233 74.7
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 2.1e-87 326.2 233 76.0
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 2.1e-87 326.2 233 75.5
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 6.0e-87 324.7 233 75.5
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 7.9e-87 324.3 234 75.6
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 1.8e-86 323.2 233 76.0
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 2.3e-86 322.8 233 76.8
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 2.3e-86 322.8 233 76.8
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 2.3e-86 322.8 234 76.1
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 5.1e-86 321.6 233 75.5
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 6.7e-86 321.2 233 75.5
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 8.7e-86 320.9 233 75.1
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 1.1e-85 320.5 230 74.8
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 4.3e-85 318.5 233 74.7
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 4.3e-85 318.5 233 74.7
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 5.7e-85 318.2 235 74.5
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 5.7e-85 318.2 233 74.7
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 7.4e-85 317.8 232 75.4
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 1.3e-84 317.0 234 74.8
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 3.7e-84 315.5 233 76.4
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 4.8e-84 315.1 233 73.0
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 4.8e-84 315.1 233 73.8
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 6.3e-84 314.7 236 73.3
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.1e-83 313.9 233 73.8
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.4e-83 313.5 233 74.7
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 1.4e-83 313.5 233 73.4
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.4e-83 313.5 233 73.8
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 1.4e-83 313.5 234 74.4
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.8e-83 313.2 254 68.9
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 1.8e-83 313.2 233 71.7
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 1.8e-83 313.2 235 73.2
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 1.8e-83 313.2 231 74.5
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 2.4e-83 312.8 239 72.4
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 3.1e-83 312.4 233 73.4
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 3.1e-83 312.4 233 73.4
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 3.1e-83 312.4 233 73.8
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 3.1e-83 312.4 233 73.8
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 5.3e-83 311.6 235 72.8
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 2.6e-82 309.3 227 73.1
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 5.9e-82 308.1 233 74.2
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 7.6e-82 307.8 233 72.1
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.7e-81 306.6 232 73.3
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 5.0e-81 305.1 232 72.4
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 8.5e-81 304.3 234 72.2
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 1.4e-80 303.5 232 72.0
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.5e-80 302.8 232 71.6
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 2.5e-80 302.8 232 71.6
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.5e-80 302.8 232 73.7
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 3.2e-80 302.4 236 71.6
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.2e-80 302.4 232 72.8
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 3.2e-80 302.4 232 71.1
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 3.2e-80 302.4 307 59.0
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 9.4e-80 300.8 232 70.7
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 9.4e-80 300.8 232 70.7
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 9.4e-80 300.8 232 70.7
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 9.4e-80 300.8 213 76.1
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 1.2e-79 300.4 233 70.8
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 1.2e-79 300.4 233 70.8
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 2.1e-79 299.7 232 70.3
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 2.1e-79 299.7 232 70.3
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 3.6e-79 298.9 234 71.8
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 3.6e-79 298.9 233 72.1
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 4.6e-79 298.5 236 69.5
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 1.0e-78 297.4 236 69.9
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 1.8e-78 296.6 234 71.4
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 3.9e-78 295.4 233 70.0
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 5.1e-78 295.0 233 70.8
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 6.7e-78 294.7 232 70.7
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 1.5e-77 293.5 232 70.7
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 1.5e-77 293.5 234 70.9
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.5e-77 293.5 230 73.5
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 3.3e-77 292.4 233 69.1
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 1.3e-76 290.4 235 68.5
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 1.3e-76 290.4 295 58.6
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.7e-76 290.0 232 70.3
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 3.7e-76 288.9 211 74.9
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 4.8e-76 288.5 231 68.8
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.1e-75 287.3 207 74.4
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 2.4e-75 286.2 232 69.8
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 5.3e-75 285.0 233 68.7
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 5.3e-75 285.0 232 69.0
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 2.0e-74 283.1 232 69.0
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 2.0e-74 283.1 203 76.8
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 1.0e-73 280.8 232 71.1
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 9.4e-72 274.2 207 72.0
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.6e-71 273.5 233 67.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.4e-70 270.4 203 72.4
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 3.0e-70 269.2 243 64.2
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 6.7e-70 268.1 232 66.4
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 2.0e-69 266.5 233 65.2
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 2.0e-69 266.5 233 65.2
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 4.4e-69 265.4 209 70.3
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.3e-68 263.8 233 64.8
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 1.3e-68 263.8 233 64.8
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 2.2e-68 263.1 215 67.9
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 6.3e-68 261.5 232 66.8
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 3.4e-66 255.8 232 65.1
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 2.3e-62 243.0 233 62.2
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 1.3e-60 237.3 232 60.8
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 6.5e-49 198.4 148 78.4
CBR_g2821 Chara braunii HOM05D001937 ORTHO05D003828 2.5e-48 196.4 222 56.8
CARHR094480 Cardamine hirsuta HOM05D001937 ORTHO05D003828 7.2e-48 194.9 139 72.7
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 9.5e-40 167.9 140 69.3
QL03p022329 Quercus lobata HOM05D001937 ORTHO05D003828 2.1e-39 166.8 140 68.6
QL03p060281 Quercus lobata HOM05D001937 ORTHO05D003828 2.8e-39 166.4 139 69.1
QL11p029100 Quercus lobata HOM05D001937 ORTHO05D003828 3.6e-39 166.0 138 69.6
QL11p053735 Quercus lobata HOM05D001937 ORTHO05D003828 1.0e-38 164.5 140 68.6
HPP92_017203 Vanilla planifolia HOM05D001937 ORTHO05D003828 1.4e-35 154.1 97 78.4
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 6.1e-31 138.7 119 68.9
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 9.8e-29 131.3 175 50.3
QL02p062665 Quercus lobata HOM05D001937 ORTHO05D003828 5.4e-27 125.6 90 75.6
QL04p008924 Quercus lobata HOM05D001937 ORTHO05D003828 5.4e-27 125.6 90 75.6
QL06p020738 Quercus lobata HOM05D001937 ORTHO05D003828 5.4e-27 125.6 90 75.6
QL12p036527 Quercus lobata HOM05D001937 ORTHO05D003828 5.4e-27 125.6 90 75.6
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 1.5e-24 117.5 233 39.5
Prupe.1G009900 Prunus persica HOM05D001937 ORTHO05D003828 9.5e-24 114.8 200 45.5
CDE08G0555 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 1.6e-23 114.0 71 81.7
SMO118G0440 Selaginella moellendorffii HOM05D001937 ORTHO05D003828 8.0e-23 111.7 73 78.1
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 3.5e-18 96.3 158 44.3
PRCOL_00000485 Prasinoderma coloniale HOM05D001937 ORTHO05D003828 3.9e-17 92.8 171 36.8
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 8.6e-17 91.7 248 35.9
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 1.5e-16 90.9 247 36.8
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.9e-16 90.5 135 52.6
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.8e-15 86.7 248 35.1
Rhsim05G0102700 Rhododendron simsii HOM05D001937 ORTHO05D009414 8.1e-15 85.1 128 45.3
Mapoly0048s0004 Marchantia polymorpha HOM05D001937 ORTHO05D003828 1.1e-14 84.7 109 55.0
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.3e-09 67.8 119 41.2
MCO03G045 Micromonas commoda HOM05D001937 ORTHO05D003828 8.1e-07 58.5 128 33.6
Cre10.g425501 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D003828 1.1e-06 58.2 143 32.2


User provided reference genes

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