Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.6e-121 438.7 218 100.0
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 8.2e-11 71.6 130 33.8
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.1e-10 71.2 137 29.9
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 1.8e-10 70.5 130 30.8
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.8e-10 70.5 122 34.4
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.8e-10 70.5 122 34.4
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.4e-10 70.1 131 32.8
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.1e-10 69.7 122 34.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 7.0e-10 68.6 130 28.5
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 9.1e-10 68.2 131 32.1
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 9.1e-10 68.2 130 28.5
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.2e-09 67.8 130 30.0
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.6e-09 67.4 130 31.5
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 2.7e-09 66.6 122 34.4
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 3.5e-09 66.2 130 30.0
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 4.5e-09 65.9 122 33.6
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.5e-09 65.9 130 30.0
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 5.9e-09 65.5 122 33.6
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 5.9e-09 65.5 130 30.0
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 7.7e-09 65.1 139 29.5
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.0e-08 64.7 130 29.2
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-08 64.7 67 41.8
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-08 64.7 67 41.8
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 1.7e-08 63.9 122 32.0
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 30.8
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 30.8
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 30.8
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 1.7e-08 63.9 122 32.8
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 26.9
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 26.9
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.7e-08 63.9 130 28.5
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.7e-08 63.9 122 33.6
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 2.2e-08 63.5 122 34.4
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 2.2e-08 63.5 137 28.5
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 2.9e-08 63.2 137 28.5
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 2.9e-08 63.2 129 30.2
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.9e-08 63.2 122 32.0
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-08 62.8 122 34.4
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 3.8e-08 62.8 130 30.0
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 3.8e-08 62.8 130 30.0
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.8e-08 62.8 122 32.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 3.8e-08 62.8 122 31.1
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 3.8e-08 62.8 122 33.6
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 3.8e-08 62.8 130 29.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 5.0e-08 62.4 130 31.5
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 5.0e-08 62.4 130 31.5
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 5.0e-08 62.4 130 31.5
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 5.0e-08 62.4 124 32.3
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 5.0e-08 62.4 122 32.0
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.0e-08 62.4 122 31.1
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.0e-08 62.4 122 31.1
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 5.0e-08 62.4 122 31.1
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 5.0e-08 62.4 67 38.8
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 6.5e-08 62.0 137 28.5
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 6.5e-08 62.0 130 30.8
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 6.5e-08 62.0 130 28.5
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 8.5e-08 61.6 122 32.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 8.5e-08 61.6 137 27.7
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 8.5e-08 61.6 131 29.0
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 8.5e-08 61.6 130 27.7
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 8.5e-08 61.6 130 30.8
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.1e-07 61.2 122 31.1
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.1e-07 61.2 122 31.1
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.1e-07 61.2 122 32.8
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-07 61.2 122 32.0
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.5e-07 60.8 137 29.9
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 1.5e-07 60.8 137 29.9
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.5e-07 60.8 137 29.9
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 1.5e-07 60.8 67 40.3
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-07 60.8 130 30.8
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.9e-07 60.5 137 29.9
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 1.9e-07 60.5 137 29.9
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 1.9e-07 60.5 122 32.0
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.9e-07 60.5 122 31.1
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 2.5e-07 60.1 130 29.2
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-07 60.1 122 31.1
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-07 60.1 122 31.1
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.5e-07 60.1 130 29.2
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 2.5e-07 60.1 122 31.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 2.5e-07 60.1 130 30.0
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 3.2e-07 59.7 123 30.9
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 3.2e-07 59.7 154 28.6
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 4.2e-07 59.3 122 32.0
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 5.5e-07 58.9 122 32.0
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 5.5e-07 58.9 130 29.2
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 7.2e-07 58.5 122 29.5
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 7.2e-07 58.5 156 28.8
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 9.4e-07 58.2 122 30.3
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.2e-06 57.8 127 30.7
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.2e-06 57.8 129 31.0
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.2e-06 57.8 165 27.3
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.6e-06 57.4 67 37.3
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 2.1e-06 57.0 130 30.0
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.7e-06 56.6 67 37.3
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.7e-06 55.8 122 32.0
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 8.0e-06 55.1 122 29.5


User provided reference genes

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