Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17437 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 1.5e-62 242.7 121 100.0
SEGI_25356 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 3.7e-45 184.9 93 100.0
Eucgr.B01932 Eucalyptus grandis HOM05D000451 ORTHO05D000351 1.7e-13 79.7 71 53.5
PSO017G6360 Papaver somniferum HOM05D000451 ORTHO05D000351 1.7e-13 79.7 56 64.3
PSO478G0113 Papaver somniferum HOM05D000451 ORTHO05D000351 1.7e-13 79.7 56 64.3
Peaxi162Scf00612g00037 Petunia axillaris HOM05D000451 ORTHO05D000351 1.7e-13 79.7 57 63.2
ATR0706G211 Amborella trichopoda HOM05D000451 ORTHO05D000351 3.7e-13 78.6 102 43.1
ECA236G4774 Erigeron canadensis HOM05D000451 ORTHO05D000351 3.7e-13 78.6 57 59.6
MBI19_g13123_MAGBIO Magnolia biondii HOM05D000451 ORTHO05D000351 3.7e-13 78.6 58 62.1
HanXRQChr04g0124461 Helianthus annuus HOM05D000451 ORTHO05D000351 4.9e-13 78.2 81 46.9
Nitab4.5_0001820g0020 Nicotiana tabacum HOM05D000451 ORTHO05D000351 4.9e-13 78.2 58 62.1
Nitab4.5_0012439g0010 Nicotiana tabacum HOM05D000451 ORTHO05D000351 4.9e-13 78.2 58 62.1
Solyc02g078790.4 Solanum lycopersicum HOM05D000451 ORTHO05D000351 4.9e-13 78.2 58 62.1
Sopen02g023610 Solanum pennellii HOM05D000451 ORTHO05D000351 4.9e-13 78.2 58 62.1
PGSC0003DMG400022424 Solanum tuberosum HOM05D000451 ORTHO05D000351 4.9e-13 78.2 58 62.1
CDE02G1342 Ceratophyllum demersum HOM05D000451 ORTHO05D000351 6.4e-13 77.8 57 63.2
Cc00_g11530 Coffea canephora HOM05D000451 ORTHO05D000351 6.4e-13 77.8 58 58.6
Nn5g27410 Nelumbo nucifera HOM05D000451 ORTHO05D000351 6.4e-13 77.8 80 48.8
Dinv40307 Davidia involucrata HOM05D000451 ORTHO05D000351 8.3e-13 77.4 83 49.4
Thhalv10006723m.g Eutrema salsugineum HOM05D000451 ORTHO05D000351 1.1e-12 77.0 51 64.7
Lj2A283T71 Lonicera japonica HOM05D000451 ORTHO05D000351 1.1e-12 77.0 102 41.2
Sp1g07660 Schrenkiella parvula HOM05D000451 ORTHO05D000351 1.1e-12 77.0 51 64.7
Sed0014911 Sechium edule HOM05D000451 ORTHO05D000351 1.1e-12 77.0 58 62.1
Hund21700 Selenicereus undatus HOM05D000451 ORTHO05D000351 1.1e-12 77.0 84 47.6
SEGI_14001 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 1.1e-12 77.0 54 66.7
Atru.chr12.1397 Acer truncatum HOM05D000451 ORTHO05D000351 1.4e-12 76.6 58 62.1
EL10Ac4g09391 Beta vulgaris HOM05D000451 ORTHO05D000351 1.4e-12 76.6 83 47.0
CDE08G1685 Ceratophyllum demersum HOM05D000451 ORTHO05D000351 1.4e-12 76.6 48 70.8
ClCG02G015560 Citrullus lanatus HOM05D000451 ORTHO05D000351 1.4e-12 76.6 58 62.1
Dinv30784 Davidia involucrata HOM05D000451 ORTHO05D000351 1.4e-12 76.6 83 49.4
Aqoxy7G03357 Aquilegia oxysepala HOM05D000451 ORTHO05D000351 1.9e-12 76.3 65 60.0
CAN.G1705.8 Capsicum annuum HOM05D000451 ORTHO05D000351 1.9e-12 76.3 103 42.7
CARHR008950 Cardamine hirsuta HOM05D000451 ORTHO05D000351 1.9e-12 76.3 51 64.7
MELO3C004232.2 Cucumis melo HOM05D000451 ORTHO05D000351 1.9e-12 76.3 58 62.1
FAN02G0562 Fragaria x ananassa HOM05D000451 ORTHO05D000351 1.9e-12 76.3 102 42.2
Hma1.2p1_1334F.1_g276260 Hydrangea macrophylla HOM05D000451 ORTHO05D000351 1.9e-12 76.3 83 44.6
Hma1.2p1_1374F.1_g278940 Hydrangea macrophylla HOM05D000451 ORTHO05D000351 1.9e-12 76.3 83 44.6
Ah.06g189590 Amaranthus hybridus HOM05D000451 ORTHO05D000351 2.4e-12 75.9 51 66.7
MSTRG.14692 Avicennia marina HOM05D000451 ORTHO05D000351 2.4e-12 75.9 71 52.1
CSS0020020 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 2.4e-12 75.9 83 48.2
CsaV3_2G006530 Cucumis sativus L. HOM05D000451 ORTHO05D000351 2.4e-12 75.9 58 58.6
Oeu026009.3 Olea europaea HOM05D000451 ORTHO05D000351 2.4e-12 75.9 71 52.1
Phvul.007G196300 Phaseolus vulgaris HOM05D000451 ORTHO05D000351 2.4e-12 75.9 61 54.1
RcHm_v2.0_Chr3g0455331 Rosa chinensis HOM05D000451 ORTHO05D000351 2.4e-12 75.9 81 45.7
VMungo0720G2144 Vigna mungo HOM05D000451 ORTHO05D000351 2.4e-12 75.9 61 54.1
Rhsim07G0183200 Rhododendron simsii HOM05D000451 ORTHO05D000351 3.2e-12 75.5 86 48.8
RhsimUnG0135400 Rhododendron simsii HOM05D000451 ORTHO05D000351 3.2e-12 75.5 86 48.8
vmacro04981 Vaccinium macrocarpon HOM05D000451 ORTHO05D000351 3.2e-12 75.5 86 48.8
Aa31sc588G20 Aethionema arabicum HOM05D000451 ORTHO05D000351 4.1e-12 75.1 51 62.7
Ca_10120_v3 Cicer arietinum L. HOM05D000451 ORTHO05D000351 4.1e-12 75.1 48 68.8
DCAR_004126 Daucus carota HOM05D000451 ORTHO05D000351 4.1e-12 75.1 51 64.7
Migut.H01499 Erythranthe guttata HOM05D000451 ORTHO05D000351 4.1e-12 75.1 103 37.9
SHI18116 Sapria himalayana HOM05D000451 ORTHO05D000351 4.1e-12 75.1 59 55.9
TPR.G6062 Trifolium pratense HOM05D000451 ORTHO05D000351 4.1e-12 75.1 48 68.8
TWI56G0869 Tripterygium wilfordii HOM05D000451 ORTHO05D000351 4.1e-12 75.1 51 64.7
Actinidia23649 Actinidia chinensis HOM05D000451 ORTHO05D000351 5.4e-12 74.7 84 46.4
Carub.0001s0838 Capsella rubella HOM05D000451 ORTHO05D000351 5.4e-12 74.7 75 50.7
COL.COLO4_10492 Corchorus olitorius HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
Duzib177G0338 Durio zibethinus HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
FvH4_6g06290 Fragaria vesca HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
FAN05G0411 Fragaria x ananassa HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
FAN09G0933 Fragaria x ananassa HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
FAN09G2708 Fragaria x ananassa HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
FAN14G2897 Fragaria x ananassa HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
Gohir.D08G226400 Gossypium hirsutum HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
Gorai.004G240400 Gossypium raimondii HOM05D000451 ORTHO05D000351 5.4e-12 74.7 51 64.7
Potri.013G019000 Populus trichocarpa HOM05D000451 ORTHO05D000351 5.4e-12 74.7 71 52.1
PGR083G1052 Punica granatum HOM05D000451 ORTHO05D000351 5.4e-12 74.7 58 62.1
Sabra05G0032300 Salix brachista HOM05D000451 ORTHO05D000351 5.4e-12 74.7 58 62.1
Sabra13G0021500 Salix brachista HOM05D000451 ORTHO05D000351 5.4e-12 74.7 71 52.1
SalBow7G0560 Salvia bowleyana HOM05D000451 ORTHO05D000351 5.4e-12 74.7 71 52.1
SalBow7G2472 Salvia bowleyana HOM05D000451 ORTHO05D000351 5.4e-12 74.7 71 52.1
SGA_v2.0_scaffold159G37650 Striga asiatica HOM05D000451 ORTHO05D000351 5.4e-12 74.7 71 50.7
Thecc.05G311000 Theobroma cacao HOM05D000451 ORTHO05D000351 5.4e-12 74.7 63 60.3
arahy.Tifrunner.gnm1.ann1.D02CS5 Arachis hypogaea HOM05D000451 ORTHO05D000351 7.1e-12 74.3 73 50.7
arahy.Tifrunner.gnm1.ann1.GQG5UP Arachis hypogaea HOM05D000451 ORTHO05D000351 7.1e-12 74.3 73 50.7
A08p34830 Brassica napus HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
BraA08t35394Z Brassica rapa HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
CANSAT54G0508 Cannabis sativa HOM05D000451 ORTHO05D000351 7.1e-12 74.3 58 60.3
Haze_04163 Corylus avellana HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
Glyma.10G153000 Glycine max HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
Glyma.20G235300 Glycine max HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
Lj5g0007729 Lotus japonicus HOM05D000451 ORTHO05D000351 7.1e-12 74.3 51 62.7
Lalb_Chr02g0148191 Lupinus albus HOM05D000451 ORTHO05D000351 7.1e-12 74.3 98 42.9
MD12G1216600 Malus domestica HOM05D000451 ORTHO05D000351 7.1e-12 74.3 58 60.3
Manes.08G119400 Manihot esculenta HOM05D000451 ORTHO05D000351 7.1e-12 74.3 71 52.1
Psat6g149920 Pisum sativum HOM05D000451 ORTHO05D000351 7.1e-12 74.3 48 66.7
Prupe.6G322900 Prunus persica HOM05D000451 ORTHO05D000351 7.1e-12 74.3 107 39.3
QL03p012752 Quercus lobata HOM05D000451 ORTHO05D000351 7.1e-12 74.3 58 60.3
Cpa.g.sc48.77 Carica papaya HOM05D000451 ORTHO05D000351 9.2e-12 73.9 58 60.3
Ciclev10000178m.g Citrus clementina HOM05D000451 ORTHO05D000351 9.2e-12 73.9 58 60.3
TWI36G1320 Tripterygium wilfordii HOM05D000451 ORTHO05D000351 9.2e-12 73.9 51 62.7
TAR636G3404 Trochodendron aralioides HOM05D000451 ORTHO05D000351 9.2e-12 73.9 51 62.7
unitig_0.g963 Utricularia gibba HOM05D000451 ORTHO05D000351 9.2e-12 73.9 77 48.1
BcaC07g38480 Brassica carinata HOM05D000451 ORTHO05D000351 1.2e-11 73.6 77 46.8
C08p12430 Brassica napus HOM05D000451 ORTHO05D000351 1.2e-11 73.6 77 46.8
BolC8t48883H Brassica oleracea HOM05D000451 ORTHO05D000351 1.2e-11 73.6 77 46.8
Potri.005G026950 Populus trichocarpa HOM05D000451 ORTHO05D000351 1.2e-11 73.6 90 45.6
Sc09g0003050 Simmondsia chinensis HOM05D000451 ORTHO05D000351 1.2e-11 73.6 57 61.4
HPP92_002139 Vanilla planifolia HOM05D000451 ORTHO05D000351 1.2e-11 73.6 103 45.6
AL1G19500 Arabidopsis lyrata HOM05D000451 ORTHO05D000351 1.6e-11 73.2 51 62.7
AT1G09060 Arabidopsis thaliana HOM05D000451 ORTHO05D000351 1.6e-11 73.2 51 62.7
SalBow7G2359 Salvia bowleyana HOM05D000451 ORTHO05D000351 1.6e-11 73.2 71 50.7
THA.LOC104805886 Tarenaya hassleriana HOM05D000451 ORTHO05D000351 2.1e-11 72.8 58 56.9
Zm00001eb394830 Zea mays HOM05D000451 ORTHO05D000351 2.1e-11 72.8 48 68.8
Medtr1g083120 Medicago truncatula HOM05D000451 ORTHO05D000351 3.5e-11 72.0 110 40.0
Os03g0346700 Oryza sativa ssp. japonica HOM05D000451 ORTHO05D000351 7.8e-11 70.9 48 66.7
SEGI_12800 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 3.6e-08 62.0 59 50.8
BcaC05g24756 Brassica carinata HOM05D000451 ORTHO05D000351 1.1e-07 60.5 35 68.6
SEGI_01523 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 1.1e-07 60.5 66 47.0
Sp2g06730 Schrenkiella parvula HOM05D000451 ORTHO05D000351 3.1e-07 58.9 56 46.4
SEGI_06129 Sequoiadendron giganteum HOM05D000451 ORTHO05D000351 5.8e-06 54.7 56 50.0


User provided reference genes

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