Gene: PGR083G1052

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G1052
  • Transcript Identifier PGR083G1052.02
  • Gene Type Coding gene
  • Location NC_045133.1 : 7448658-7454111 : positive

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031404528.1
  • name LOC116213646
  • name XM_031548668.1
  • id gene-LOC116213646
  • uniprot A0A2I0J5L3

Descriptions

  • product lysine-specific demethylase JMJ25, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IEA
GOA Databasehistone H3-K9 demethylation
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0032259
IEA
GOA Databasemethylation
GO:0051573
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 methylation AT1G09060
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G09060
GO:2000616
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 acetylation AT1G09060
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G09060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032454
IEA
GOA Databasehistone demethylase activity (H3-K9 specific)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G09060
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09060
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G09060
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G09060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
IPR014977 WRC domain
IPR003347 JmjC domain
IPR045109 Histone demethylase JHDM2-like
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)