Gene: C08p12430

General Information

Structural Information

  • Species Brassica napus
  • Gene Identifier C08p12430
  • Transcript Identifier C08p12430
  • Gene Type Coding gene
  • Location C08 : 16620839-16624729 : negative

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid C08p12430.1_BnaDAR
  • v5 BnaCnng06570D
  • single_cell_id C08p12430.1-BnaDAR
  • ensembl GSBRNA2T00051520001

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0051573
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 methylation AT1G09060
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G09060
GO:2000616
ISO
PLAZA Integrative Orthologynegative regulation of histone H3-K9 acetylation AT1G09060
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G09060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G09060
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09060
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G09060
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G09060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR045109 Histone demethylase JHDM2-like
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
IPR014977 WRC domain
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)