Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 4.5e-117 424.5 196 100.0
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 3.4e-24 115.9 111 55.0
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 4.9e-23 112.1 93 59.1
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 3.2e-22 109.4 93 58.1
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 9.3e-22 107.8 111 55.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.2e-21 107.5 93 55.9
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.2e-21 107.5 111 55.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.2e-21 107.5 93 58.1
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.7e-21 106.3 93 59.1
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.3e-20 104.0 93 54.8
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 1.8e-20 103.6 111 52.3
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 3.9e-20 102.4 126 46.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 3.9e-20 102.4 111 52.3
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.1e-20 102.1 111 51.4
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 5.1e-20 102.1 93 55.9
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 8.7e-20 101.3 93 54.8
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.5e-19 100.5 111 54.1
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-19 100.1 93 55.9
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.5e-19 99.8 93 55.9
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 2.5e-19 99.8 93 53.8
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.3e-19 99.4 111 52.3
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 4.3e-19 99.0 111 50.5
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 5.7e-19 98.6 111 50.5
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 5.7e-19 98.6 93 57.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.7e-19 98.6 111 50.5
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 5.7e-19 98.6 93 53.8
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 5.7e-19 98.6 93 54.8
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 5.7e-19 98.6 93 53.8
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 7.4e-19 98.2 111 49.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 7.4e-19 98.2 93 51.6
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.7e-19 97.8 93 54.8
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 9.7e-19 97.8 93 52.7
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 9.7e-19 97.8 93 52.7
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.6e-18 97.1 111 50.5
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.2e-18 96.7 93 55.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.2e-18 96.7 111 49.5
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 2.2e-18 96.7 93 50.5
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.8e-18 96.3 111 51.4
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.8e-18 96.3 111 51.4
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 2.8e-18 96.3 93 52.7
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 3.7e-18 95.9 111 50.5
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 3.7e-18 95.9 111 51.4
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 4.8e-18 95.5 111 48.6
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 4.8e-18 95.5 111 50.5
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 4.8e-18 95.5 93 54.8
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 4.8e-18 95.5 93 51.6
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.2e-18 94.7 93 53.8
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 8.2e-18 94.7 93 55.9
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 8.2e-18 94.7 111 50.5
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 1.1e-17 94.4 93 49.5
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.1e-17 94.4 93 51.6
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.1e-17 94.4 111 49.5
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 1.4e-17 94.0 93 50.5
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 1.4e-17 94.0 93 51.6
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.8e-17 93.6 112 50.9
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.8e-17 93.6 112 50.9
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.8e-17 93.6 111 51.4
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 2.4e-17 93.2 93 55.9
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 2.4e-17 93.2 93 50.5
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 2.4e-17 93.2 93 51.6
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.1e-17 92.8 94 54.3
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 3.1e-17 92.8 93 53.8
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 3.1e-17 92.8 93 54.8
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.1e-17 92.4 111 48.6
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 4.1e-17 92.4 93 52.7
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 5.3e-17 92.0 93 52.7
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 5.3e-17 92.0 93 52.7
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 5.3e-17 92.0 111 49.5
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 5.3e-17 92.0 93 51.6
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 6.9e-17 91.7 93 49.5
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 6.9e-17 91.7 93 52.7
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 9.0e-17 91.3 93 48.4
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 9.0e-17 91.3 93 52.7
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 9.0e-17 91.3 94 53.2
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.2e-16 90.9 93 52.7
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-16 90.9 107 48.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.2e-16 90.9 93 51.6
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.5e-16 90.5 111 47.7
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 2.0e-16 90.1 93 52.7
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 2.6e-16 89.7 93 53.8
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 2.6e-16 89.7 93 52.7
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 2.6e-16 89.7 107 47.7
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.6e-16 89.7 107 47.7
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.6e-16 89.7 87 54.0
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 2.6e-16 89.7 93 52.7
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.6e-16 89.7 105 47.6
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.6e-16 89.7 111 49.5
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.6e-16 89.7 111 49.5
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 3.4e-16 89.4 93 49.5
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 3.4e-16 89.4 93 52.7
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 4.5e-16 89.0 93 48.4
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 5.9e-16 88.6 93 50.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 5.9e-16 88.6 111 49.5
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 5.9e-16 88.6 93 52.7
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.0e-15 87.8 111 45.0
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 1.7e-15 87.0 94 50.0
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 2.9e-15 86.3 93 49.5
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 2.9e-15 86.3 93 52.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 3.8e-15 85.9 95 49.5
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.1e-14 84.3 93 49.5
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 2.5e-14 83.2 111 47.7
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 4.2e-14 82.4 93 47.3
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 2.7e-13 79.7 111 41.4
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 2.3e-12 76.6 95 43.2
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 8.8e-12 74.7 96 42.7
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.5e-11 73.2 93 43.0
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.2e-10 70.1 46 69.6
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 8.2e-10 68.2 62 54.8
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.2e-10 68.2 87 41.4
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 3.1e-09 66.2 73 49.3
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-07 60.8 93 40.9
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 5.0e-07 58.9 83 41.0
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.2e-06 55.8 87 41.4
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 5.5e-06 55.5 73 42.5


User provided reference genes

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