Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11089 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 3.3e-101 371.7 187 100.0
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 2.3e-25 119.8 114 54.4
ECA247G4107 Erigeron canadensis HOM05D005655 ORTHO05D007386 3.3e-24 115.9 105 54.3
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 8.1e-23 111.3 104 54.8
Glyma.20G171733 Glycine max HOM05D005655 ORTHO05D007386 1.4e-22 110.5 110 49.1
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 1.4e-22 110.5 109 49.5
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 1.8e-22 110.2 117 54.7
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 4.0e-22 109.0 110 54.5
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 1.2e-21 107.5 113 50.4
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 1.5e-21 107.1 108 50.9
Actinidia17754 Actinidia chinensis HOM05D005655 ORTHO05D007386 9.8e-21 104.4 106 51.9
Lalb_Chr02g0141651 Lupinus albus HOM05D005655 ORTHO05D007386 9.8e-21 104.4 105 52.4
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 9.8e-21 104.4 105 49.5
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 1.3e-20 104.0 115 50.4
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 1.3e-20 104.0 105 54.3
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 1.7e-20 103.6 106 56.6
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 1.7e-20 103.6 111 53.2
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 1.7e-20 103.6 105 50.5
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 1.7e-20 103.6 105 49.5
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 1.7e-20 103.6 105 49.5
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 2.2e-20 103.2 105 49.5
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 2.2e-20 103.2 109 51.4
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 2.2e-20 103.2 103 47.6
FAN24G0542 Fragaria x ananassa HOM05D005655 ORTHO05D007386 3.7e-20 102.4 115 49.6
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 3.7e-20 102.4 105 53.3
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 3.7e-20 102.4 105 49.5
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 4.9e-20 102.1 115 49.6
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 4.9e-20 102.1 106 53.8
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 6.4e-20 101.7 105 53.3
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 8.3e-20 101.3 106 50.0
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 8.3e-20 101.3 105 49.5
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 1.1e-19 100.9 102 52.0
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 1.1e-19 100.9 102 52.0
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 1.1e-19 100.9 105 48.6
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 1.1e-19 100.9 104 48.1
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 1.1e-19 100.9 108 51.9
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 1.4e-19 100.5 107 54.2
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 1.4e-19 100.5 110 50.9
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 1.9e-19 100.1 108 48.1
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 2.4e-19 99.8 105 49.5
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 2.4e-19 99.8 105 47.6
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 2.4e-19 99.8 106 51.9
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 3.2e-19 99.4 105 46.7
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 3.2e-19 99.4 109 51.4
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 4.1e-19 99.0 106 52.8
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 4.1e-19 99.0 115 47.0
unitig_21.g20593 Utricularia gibba HOM05D005655 ORTHO05D007386 4.1e-19 99.0 123 48.0
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 5.4e-19 98.6 105 50.5
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 5.4e-19 98.6 108 50.9
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 7.1e-19 98.2 105 50.5
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 7.1e-19 98.2 105 49.5
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 7.1e-19 98.2 106 49.1
FAN15G2448 Fragaria x ananassa HOM05D005655 ORTHO05D007386 9.2e-19 97.8 115 47.8
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 9.2e-19 97.8 106 50.9
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.7e-18 96.3 108 49.1
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 2.7e-18 96.3 115 47.0
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 2.7e-18 96.3 106 49.1
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 3.5e-18 95.9 109 46.8
vmacro21200 Vaccinium macrocarpon HOM05D005655 ORTHO05D007386 3.5e-18 95.9 107 45.8
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 4.6e-18 95.5 109 47.7
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 4.6e-18 95.5 110 49.1
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 6.0e-18 95.1 105 44.8
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis HOM05D005655 ORTHO05D007386 1.0e-17 94.4 105 44.8
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 1.0e-17 94.4 110 49.1
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 1.3e-17 94.0 105 44.8
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 1.3e-17 94.0 107 47.7
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 2.3e-17 93.2 105 45.7
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 3.9e-17 92.4 106 47.2
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 5.1e-17 92.0 105 48.6
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 5.1e-17 92.0 106 47.2
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 8.6e-17 91.3 104 47.1
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 8.6e-17 91.3 109 45.0
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 8.6e-17 91.3 105 46.7
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 1.1e-16 90.9 107 47.7
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 1.5e-16 90.5 106 46.2
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.5e-16 90.5 109 45.9
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 1.5e-16 90.5 108 48.1
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 1.5e-16 90.5 140 40.7
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 2.5e-16 89.7 106 46.2
SHI09123 Sapria himalayana HOM05D005655 ORTHO05D007386 2.5e-16 89.7 108 45.4
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 4.3e-16 89.0 111 43.2
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 4.3e-16 89.0 104 46.2
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 4.3e-16 89.0 104 46.2
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 9.5e-16 87.8 109 44.0
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 1.2e-15 87.4 110 43.6
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 1.6e-15 87.0 108 46.3
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 1.6e-15 87.0 105 42.9
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 2.1e-15 86.7 69 58.0
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 2.8e-15 86.3 69 58.0
DCAR_013167 Daucus carota HOM05D005655 ORTHO05D007386 3.6e-15 85.9 69 56.5
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 4.7e-15 85.5 106 44.3
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 8.1e-15 84.7 108 40.7
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 2.3e-14 83.2 111 41.4
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 3.1e-14 82.8 69 56.5
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 4.0e-14 82.4 108 40.7
MD05G1036900 Malus domestica HOM05D005655 ORTHO05D007386 8.9e-14 81.3 87 46.0
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 3.4e-13 79.3 95 47.4
Psat6g189760 Pisum sativum HOM05D005655 ORTHO05D007386 2.9e-12 76.3 69 53.6
CBR_g31748 Chara braunii HOM05D005655 ORTHO05D007386 1.1e-11 74.3 110 37.3
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 4.1e-11 72.4 65 50.8
Lsat_1_v5_gn_1_5940 Lactuca sativa HOM05D005655 ORTHO05D007386 9.6e-08 61.2 41 63.4
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 1.6e-07 60.5 41 65.9
SMO174G0185 Selaginella moellendorffii HOM05D005655 ORTHO05D007386 3.6e-07 59.3 39 64.1
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 3.6e-07 59.3 41 63.4
arahy.Tifrunner.gnm1.ann1.15WA1E Arachis hypogaea HOM05D005655 ORTHO05D007386 4.7e-07 58.9 123 39.0
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 6.2e-07 58.5 105 38.1


User provided reference genes

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