Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.1e-100 369.0 180 100.0
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.1e-44 181.4 171 54.4
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.4e-43 180.3 170 54.1
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 2.3e-43 179.5 148 58.8
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 2.3e-43 179.5 176 51.7
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.0e-43 179.1 176 51.7
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 3.0e-43 179.1 176 52.8
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.0e-43 179.1 176 52.8
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.0e-43 178.7 176 52.8
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 5.2e-43 178.3 175 51.4
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 8.8e-43 177.6 176 52.8
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 2.0e-42 176.4 176 52.8
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 2.0e-42 176.4 171 52.6
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 3.3e-42 175.6 177 52.5
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 3.3e-42 175.6 148 58.1
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 4.4e-42 175.3 147 59.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 4.4e-42 175.3 177 52.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.4e-42 175.3 176 52.3
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.5e-42 174.5 171 52.6
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 7.5e-42 174.5 177 52.0
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 7.5e-42 174.5 164 55.5
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 9.7e-42 174.1 171 52.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 9.7e-42 174.1 172 51.7
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.7e-41 173.3 171 50.9
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.7e-41 173.3 170 52.9
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.7e-41 173.3 176 52.3
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.7e-41 173.3 170 51.2
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.2e-41 172.9 170 52.9
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 2.2e-41 172.9 173 51.4
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.2e-41 172.9 176 51.7
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 2.8e-41 172.6 166 53.6
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 2.8e-41 172.6 176 50.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.8e-41 172.6 171 52.6
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 3.7e-41 172.2 176 52.3
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 4.8e-41 171.8 170 52.9
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 4.8e-41 171.8 165 52.7
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 6.3e-41 171.4 177 50.8
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.1e-40 170.6 176 50.6
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.1e-40 170.6 169 53.8
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 1.8e-40 169.9 170 51.2
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 2.4e-40 169.5 176 50.0
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 2.4e-40 169.5 170 51.2
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 2.4e-40 169.5 170 51.2
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 3.1e-40 169.1 170 51.8
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 4.1e-40 168.7 147 57.1
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 4.1e-40 168.7 171 51.5
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 4.1e-40 168.7 170 50.6
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 4.1e-40 168.7 176 51.1
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 4.1e-40 168.7 176 49.4
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 5.3e-40 168.3 148 58.8
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 5.3e-40 168.3 170 50.6
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 5.3e-40 168.3 170 51.2
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 7.0e-40 167.9 171 50.3
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 9.1e-40 167.5 170 50.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 9.1e-40 167.5 170 50.6
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 9.1e-40 167.5 170 50.6
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 9.1e-40 167.5 170 50.0
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-39 167.2 170 50.6
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.2e-39 167.2 170 49.4
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.6e-39 166.8 176 48.3
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 2.0e-39 166.4 176 48.9
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.7e-39 166.0 148 56.8
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.7e-39 166.0 176 47.7
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.7e-39 166.0 176 49.4
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.7e-39 166.0 176 49.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 3.5e-39 165.6 170 49.4
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.5e-39 165.6 166 51.8
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 4.5e-39 165.2 178 48.9
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 4.5e-39 165.2 165 52.7
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 5.9e-39 164.9 170 50.0
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 5.9e-39 164.9 171 50.3
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 7.7e-39 164.5 176 47.7
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 7.7e-39 164.5 176 47.7
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.7e-38 163.3 171 48.5
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 2.2e-38 162.9 165 50.9
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 2.9e-38 162.5 176 47.7
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 3.8e-38 162.2 170 49.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 3.8e-38 162.2 165 50.3
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 8.5e-38 161.0 148 53.4
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 8.5e-38 161.0 181 48.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 8.5e-38 161.0 176 47.7
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 8.5e-38 161.0 148 54.7
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 1.1e-37 160.6 146 55.5
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.9e-37 159.8 143 58.0
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 9.4e-37 157.5 155 51.0
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 1.2e-36 157.1 155 51.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.6e-36 156.8 143 54.5
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.1e-36 156.4 170 48.2
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 2.7e-36 156.0 148 53.4
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 2.7e-36 156.0 159 50.9
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.7e-36 155.2 170 48.2
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 8.0e-36 154.5 172 45.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.4e-35 153.7 148 52.7
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.8e-35 153.3 195 44.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.8e-35 153.3 143 55.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 2.3e-35 152.9 170 45.3
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 2.3e-35 152.9 166 49.4
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 3.0e-35 152.5 164 50.0
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 4.0e-35 152.1 152 50.7
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 6.8e-35 151.4 142 54.9
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.2e-34 150.6 143 53.1
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 2.2e-33 146.4 141 53.9
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 2.2e-33 146.4 148 50.7
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 1.2e-31 140.6 156 48.1
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.3e-30 137.1 182 44.5
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 3.8e-30 135.6 176 43.2
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 9.5e-29 131.0 165 44.8
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 3.5e-23 112.5 143 41.3
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.4e-19 100.5 137 39.4
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.8e-11 71.6 78 47.4
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.4e-10 68.9 77 45.5


User provided reference genes

Program Settings