Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 0.0e+00 1719.5 867 100.0
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 0.0e+00 1260.4 691 93.1
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 0.0e+00 1108.2 719 80.8
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 0.0e+00 1085.9 691 79.6
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 5.7e-297 1024.2 692 76.3
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 1.6e-291 1006.1 706 74.2
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 8.5e-277 957.2 695 69.8
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 3.6e-275 951.8 726 68.2
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.4e-271 939.9 696 69.7
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 4.1e-271 938.3 695 69.5
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 2.3e-269 932.6 696 70.3
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 1.5e-268 929.9 696 69.3
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 8.0e-267 924.1 695 67.5
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 2.2e-264 916.0 696 69.3
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 9.2e-263 910.6 696 67.5
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 1.2e-262 910.2 696 67.5
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.0e-261 907.1 694 67.7
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 1.9e-260 902.9 696 67.4
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 5.6e-260 901.4 694 66.9
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 2.8e-259 899.0 704 66.3
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.0e-258 897.1 706 66.7
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 3.1e-258 895.6 700 67.6
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 4.4e-257 891.7 696 66.7
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 4.4e-257 891.7 697 67.3
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 3.7e-256 888.6 697 66.3
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 8.3e-256 887.5 697 66.1
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 1.1e-255 887.1 694 66.9
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 1.9e-255 886.3 696 66.4
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 2.4e-255 885.9 696 66.1
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 3.0e-253 879.0 696 65.5
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 3.9e-253 878.6 695 66.5
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 8.6e-253 877.5 708 64.8
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 1.1e-252 877.1 696 66.2
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 3.3e-252 875.5 705 64.8
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 7.3e-252 874.4 705 64.7
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 9.5e-252 874.0 705 64.7
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 4.7e-251 871.7 697 65.9
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 1.4e-250 870.2 704 65.6
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 8.9e-250 867.5 696 64.8
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 1.2e-249 867.1 697 64.6
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 2.6e-249 865.9 697 65.1
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 1.7e-248 863.2 695 64.2
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 8.3e-248 860.9 698 64.8
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 8.3e-248 860.9 695 65.2
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 1.9e-247 859.8 704 64.5
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 1.9e-247 859.8 695 65.3
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 5.4e-247 858.2 695 63.0
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 2.7e-246 855.9 694 64.0
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 3.5e-246 855.5 696 64.1
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 6.0e-246 854.7 696 64.1
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 6.0e-246 854.7 695 65.2
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 7.8e-246 854.4 695 65.2
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 7.8e-246 854.4 696 63.9
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 1.9e-244 849.7 700 64.0
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 1.2e-243 847.0 695 64.2
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 2.1e-243 846.3 695 62.7
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 8.1e-243 844.3 696 64.9
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 6.8e-242 841.3 695 63.0
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 8.9e-242 840.9 695 62.7
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 1.3e-240 837.0 734 59.9
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 1.9e-239 833.2 695 61.7
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 1.9e-239 833.2 695 62.2
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 1.2e-238 830.5 695 62.3
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 4.6e-238 828.6 696 63.2
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 6.2e-235 818.1 718 61.3
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.8e-234 816.6 780 57.3
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 2.2e-232 809.7 703 61.6
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 2.9e-232 809.3 697 61.4
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 1.1e-231 807.4 696 62.8
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 1.4e-231 807.0 695 62.0
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 2.4e-231 806.2 697 61.3
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 3.2e-231 805.8 695 61.9
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 2.7e-230 802.7 704 60.9
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 4.6e-230 802.0 721 59.4
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.1e-228 797.3 695 60.6
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 3.3e-228 795.8 697 61.0
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 4.3e-228 795.4 721 59.5
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 2.1e-227 793.1 736 58.6
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 2.1e-227 793.1 736 58.6
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 4.8e-227 792.0 734 58.7
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 4.8e-227 792.0 705 60.1
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 8.1e-227 791.2 736 58.7
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 1.4e-226 790.4 721 59.1
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 2.4e-226 789.6 734 58.6
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 2.0e-225 786.6 736 58.2
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 1.4e-223 780.4 695 60.1
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 4.2e-223 778.9 738 57.9
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 5.4e-223 778.5 738 57.7
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 3.9e-221 772.3 696 59.3
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 2.3e-213 746.5 695 57.8
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 5.1e-213 745.3 701 57.8
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 6.2e-211 738.4 693 55.7
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 8.7e-205 718.0 701 55.9
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 3.9e-197 692.6 723 54.2
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 6.7e-197 691.8 570 62.1
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 3.4e-193 679.5 699 54.1
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 3.8e-192 676.0 695 54.5
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.7e-184 650.6 597 58.8
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 4.1e-154 549.7 433 66.1
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 4.9e-147 526.2 714 45.9
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 4.3e-135 486.5 736 41.4
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 1.2e-134 485.0 353 70.3
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 1.5e-132 478.0 733 41.6
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 2.3e-125 454.1 716 40.1
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 7.8e-121 439.1 468 50.6
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 5.3e-109 399.8 531 46.3
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 5.6e-103 379.8 379 54.4
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 9.6e-103 379.0 253 75.5
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 4.5e-84 317.0 851 31.3
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 1.8e-64 251.9 273 52.0
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 9.7e-63 246.1 747 30.8
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.8e-53 215.3 135 78.5
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 9.8e-47 193.0 108 83.3
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 9.1e-45 186.4 304 38.5
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 7.7e-44 183.3 106 83.0
Psat4g067080 Pisum sativum HOM05D000251 ORTHO05D007889 4.7e-41 174.1 233 43.8
Rhsim11G0003600 Rhododendron simsii HOM05D002884 ORTHO05D003178 5.4e-37 160.6 175 57.7
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 3.3e-34 151.4 149 54.4
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 3.3e-34 151.4 91 81.3
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 7.8e-20 103.6 241 33.2
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.7e-19 102.4 100 55.0
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 4.4e-15 87.8 96 53.1
Hma1.2p1_0690F.1_g203840 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 2.2e-14 85.5 46 89.1
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.1e-09 68.9 89 39.3
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 1.1e-08 66.6 66 40.9
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.1e-08 66.6 63 46.0
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.4e-08 66.2 89 37.1
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 3.1e-08 65.1 64 46.9
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 4.0e-08 64.7 64 46.9
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 5.2e-08 64.3 89 38.2
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 6.8e-08 63.9 89 37.1
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 6.8e-08 63.9 89 37.1
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 6.8e-08 63.9 91 39.6
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 6.8e-08 63.9 95 36.8
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 6.8e-08 63.9 64 45.3
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 6.8e-08 63.9 64 45.3
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 8.9e-08 63.5 66 39.4
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 8.9e-08 63.5 95 35.8
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.2e-07 63.2 66 40.9
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 1.5e-07 62.8 89 36.0
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 1.5e-07 62.8 86 39.5
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 1.5e-07 62.8 64 43.8
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 2.0e-07 62.4 64 45.3
Lsat_1_v5_gn_4_21520 Lactuca sativa HOM05D003221 ORTHO05D016847 2.6e-07 62.0 38 73.7
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 2.6e-07 62.0 64 43.8
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.6e-07 62.0 64 46.9
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 3.4e-07 61.6 73 45.2
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 4.4e-07 61.2 86 38.4
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 4.4e-07 61.2 89 37.1
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 7.6e-07 60.5 64 43.8
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 7.6e-07 60.5 81 38.3
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 7.6e-07 60.5 89 37.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 7.6e-07 60.5 80 40.0
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 9.9e-07 60.1 89 34.8
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 1.3e-06 59.7 89 34.8
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 1.3e-06 59.7 80 38.8
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 1.3e-06 59.7 80 38.8
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 1.7e-06 59.3 64 40.6
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.7e-06 59.3 66 39.4
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.9e-06 58.5 64 43.8
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 2.9e-06 58.5 62 40.3
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 2.9e-06 58.5 89 34.8
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 2.9e-06 58.5 91 37.4
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.8e-06 58.2 66 39.4
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 3.8e-06 58.2 89 31.5
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.8e-06 58.2 89 37.1
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 6.4e-06 57.4 58 43.1
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 8.4e-06 57.0 64 42.2
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 8.4e-06 57.0 64 42.2


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