Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.2e-247 859.4 424 100.0
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 2.1e-236 822.0 424 95.0
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.4e-227 792.7 426 92.0
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.4e-224 782.7 425 90.4
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 2.7e-215 751.9 421 87.9
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 2.5e-213 745.3 425 87.8
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 4.4e-210 734.6 423 87.0
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 7.8e-207 723.8 423 82.3
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.7e-206 722.6 420 86.2
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 9.5e-205 716.8 423 82.5
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 2.8e-204 715.3 429 81.8
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 4.7e-204 714.5 420 83.1
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 7.5e-202 707.2 423 81.8
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.7e-201 706.1 423 81.3
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 4.9e-201 704.5 400 83.8
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 8.3e-201 703.7 419 81.9
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 5.4e-200 701.0 401 82.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 2.0e-199 699.1 421 81.0
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 4.6e-199 698.0 419 82.1
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 7.8e-199 697.2 419 80.4
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 3.9e-198 694.9 420 81.9
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 5.0e-198 694.5 422 82.5
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 8.6e-198 693.7 418 83.0
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 2.5e-197 692.2 398 83.4
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.5e-197 692.2 422 81.5
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.3e-197 691.4 422 81.3
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 2.8e-196 688.7 420 80.0
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 2.8e-196 688.7 422 80.8
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 4.7e-196 688.0 419 82.1
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 6.2e-196 687.6 421 81.5
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 6.2e-196 687.6 420 80.2
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 6.2e-196 687.6 422 80.6
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 8.1e-196 687.2 425 79.1
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 8.1e-196 687.2 422 80.8
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 8.1e-196 687.2 419 81.6
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.4e-195 686.4 417 80.6
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.4e-195 686.4 417 80.6
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.4e-195 686.4 418 82.5
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.4e-195 686.4 424 79.2
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 1.8e-195 686.0 424 79.5
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 3.1e-195 685.3 419 80.9
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.0e-195 684.9 417 79.1
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 5.2e-195 684.5 421 77.9
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 5.2e-195 684.5 391 83.1
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.0e-194 682.6 419 80.4
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 3.4e-194 681.8 420 79.3
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 3.4e-194 681.8 420 79.3
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 7.5e-194 680.6 422 77.3
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 9.9e-194 680.2 416 80.0
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 2.2e-193 679.1 420 79.0
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 2.9e-193 678.7 401 78.8
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 4.9e-193 677.9 417 79.4
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 4.9e-193 677.9 423 77.1
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.4e-192 676.4 423 75.4
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.4e-192 676.4 417 79.9
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 1.9e-192 676.0 418 78.7
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 2.4e-192 675.6 392 83.2
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 3.2e-192 675.2 425 79.5
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 9.2e-192 673.7 422 77.7
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 9.2e-192 673.7 423 78.5
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.6e-191 672.9 420 78.6
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 7.8e-191 670.6 399 79.4
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.0e-190 670.2 419 78.5
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.3e-190 669.8 423 74.9
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.3e-190 669.1 399 79.4
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 2.3e-190 669.1 392 81.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 3.0e-190 668.7 425 75.8
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 8.6e-190 667.2 400 78.5
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 4.3e-189 664.8 402 78.6
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 4.3e-189 664.8 440 76.1
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.6e-188 662.9 399 78.4
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.1e-188 662.5 400 77.8
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.1e-188 662.5 400 77.8
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.1e-188 662.5 400 77.8
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 8.1e-188 660.6 400 77.5
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 8.1e-188 660.6 400 77.5
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.4e-187 659.8 401 77.1
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 1.8e-187 659.4 424 74.1
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 4.0e-187 658.3 396 78.8
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 6.8e-187 657.5 400 77.2
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 8.9e-187 657.1 415 76.1
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.5e-186 656.4 415 75.9
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 5.6e-181 637.9 413 74.8
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.4e-176 623.2 377 81.4
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 4.2e-176 621.7 377 82.5
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 9.3e-176 620.5 398 75.1
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 6.0e-175 617.8 352 85.5
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 2.3e-174 615.9 399 75.7
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.1e-173 613.6 373 81.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 5.6e-173 611.3 370 81.6
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 5.8e-170 601.3 353 81.0
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 5.8e-170 601.3 351 81.2
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.7e-169 599.7 392 71.4
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 3.1e-163 578.9 321 84.4
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.7e-161 573.2 333 82.9
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 6.0e-159 564.7 394 66.8
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 6.0e-159 564.7 333 81.4
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 3.9e-158 562.0 322 81.1
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 2.4e-155 552.7 324 79.6
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 9.3e-152 540.8 420 69.3
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 3.9e-150 535.4 386 63.2
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 2.2e-148 529.6 339 74.9
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 2.2e-148 529.6 316 77.2
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 1.4e-147 526.9 284 88.7
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 8.5e-145 517.7 407 59.5
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.4e-142 510.4 318 74.2
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.3e-140 503.8 390 58.7
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 1.0e-134 484.2 301 79.4
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 3.7e-124 449.1 266 78.2
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.2e-109 401.0 274 63.5
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 3.1e-107 392.9 403 48.1
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.6e-103 380.6 248 77.4
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 1.0e-102 377.9 240 75.4
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.6e-98 364.0 278 65.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.4e-94 350.9 404 44.3
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.3e-88 329.7 182 85.7
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 7.0e-83 312.0 406 40.9
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.3e-65 254.6 360 38.9
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 2.3e-65 253.8 450 33.8
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 5.1e-65 252.7 323 45.2
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 4.8e-31 139.8 80 77.5
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 2.5e-24 117.5 75 73.3
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 2.5e-24 117.5 94 74.5
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 2.5e-24 117.5 74 71.6
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 1.1e-19 102.1 51 82.4
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 3.3e-16 90.5 135 39.3
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 4.1e-14 83.6 88 53.4
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 5.0e-12 76.6 88 61.4
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 4.7e-10 70.1 49 67.3
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.4e-06 58.5 88 42.0


User provided reference genes

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